RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 SOX3P41225 446 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 ELK3P41970 407 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 PLA2G16P53816 162 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 NUP107P57740 925 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 TGM3Q08188 693 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 PMPCAQ10713 525 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 STX4Q12846 297 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 MYBPHQ13203 477 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 EFTUD2Q15029 972 aaKnown RBP eCLIP8.7□□□□□ -1.021e-11■■■■□ 19.9
SNX17-207ENST00000489402 C18orf21Q32NC0 220 aaPredicted RBP8.7□□□□□ -1.02
SNX17-207ENST00000489402 HP1BP3Q5SSJ5 553 aaPredicted RBP8.7□□□□□ -1.02
SNX17-207ENST00000489402 NDUFAF5Q5TEU4 345 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 IL20RBQ6UXL0 311 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 HSDL2Q6YN16 418 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 SLCO4C1Q6ZQN7 724 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 RTL4Q6ZR62 310 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 CLNKQ7Z7G1 428 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 CCDC71Q8IV32 467 aaPredicted RBP8.7□□□□□ -1.02
SNX17-207ENST00000489402 DMRTC2Q8IXT2 367 aaPredicted RBP8.7□□□□□ -1.02
SNX17-207ENST00000489402 KLHDC8AQ8IYD2 350 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 MYRIPQ8NFW9 859 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 OR2L5Q8NG80 312 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 OR2M7Q8NG81 312 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 OR10Q1Q8NGQ4 319 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 OR14A16Q8NHC5 309 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 LRRC39Q96DD0 335 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 MS4A6EQ96DS6 147 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 VPS39Q96JC1 886 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 SERINC2Q96SA4 455 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 SMC6Q96SB8 1091 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 OSBPL9Q96SU4 736 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 WDR83Q9BRX9 315 aaKnown RBP8.7□□□□□ -1.02
SNX17-207ENST00000489402 CAPS2Q9BXY5 557 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 TTTY12Q9BZ98 90 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 UCK2Q9BZX2 261 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 PITHD1Q9GZP4 211 aaPredicted RBP8.7□□□□□ -1.02
SNX17-207ENST00000489402 REXO4Q9GZR2 422 aaKnown RBP8.7□□□□□ -1.02
SNX17-207ENST00000489402 ZDHHC11Q9H8X9 412 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 PRM3Q9NNZ6 103 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 NPDC1Q9NQX5 325 aaPredicted RBP8.7□□□□□ -1.02
SNX17-207ENST00000489402 DEPPQ9NTK1 212 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 MYOTQ9UBF9 498 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 TNFRSF10DQ9UBN6 386 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 CTNNAL1Q9UBT7 734 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 KCNN3Q9UGI6 736 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 MYOCOSA0A1B0GUC4 107 aa8.69□□□□□ -1.02
SNX17-207ENST00000489402 NCF1BA6NI72 391 aaPredicted RBP8.69□□□□□ -1.02
SNX17-207ENST00000489402 NCF1CA8MVU1 366 aaPredicted RBP8.69□□□□□ -1.02
SNX17-207ENST00000489402 WWP2O00308 870 aa8.69□□□□□ -1.02
SNX17-207ENST00000489402 CLGNO14967 610 aa8.69□□□□□ -1.02
SNX17-207ENST00000489402 PRKNO60260 465 aaPredicted RBP8.69□□□□□ -1.02
SNX17-207ENST00000489402 CLEC3AO75596 197 aa8.69□□□□□ -1.02
SNX17-207ENST00000489402 OR6B1O95007 311 aa8.69□□□□□ -1.02
SNX17-207ENST00000489402 ZWINTO95229 277 aa8.69□□□□□ -1.02
SNX17-207ENST00000489402 HOXD4P09016 255 aaPredicted RBP8.69□□□□□ -1.02
SNX17-207ENST00000489402 NCF1P14598 390 aaPredicted RBP8.69□□□□□ -1.02
SNX17-207ENST00000489402 CNR1P21554 472 aa8.69□□□□□ -1.02
SNX17-207ENST00000489402 ACVR2AP27037 513 aa8.69□□□□□ -1.02
SNX17-207ENST00000489402 GDF5P43026 501 aa8.69□□□□□ -1.02
SNX17-207ENST00000489402 GPR143P51810 404 aa8.69□□□□□ -1.02
SNX17-207ENST00000489402 HNRNPFP52597 415 aaKnown RBP8.69□□□□□ -1.02
SNX17-207ENST00000489402 ART1P52961 327 aa8.69□□□□□ -1.02
SNX17-207ENST00000489402 SLC12A2P55011 1212 aa8.69□□□□□ -1.02
SNX17-207ENST00000489402 MTTPP55157 894 aa8.69□□□□□ -1.02
SNX17-207ENST00000489402 TFF3Q07654 80 aa8.69□□□□□ -1.02
SNX17-207ENST00000489402 MGAT5Q09328 741 aa8.69□□□□□ -1.02
SNX17-207ENST00000489402 ZNF460Q14592 562 aa8.69□□□□□ -1.02
SNX17-207ENST00000489402 MORF4L2Q15014 288 aa8.69□□□□□ -1.02
SNX17-207ENST00000489402 TSNQ15631 228 aaKnown RBP8.69□□□□□ -1.02
SNX17-207ENST00000489402 GXYLT1Q4G148 440 aa8.69□□□□□ -1.02
SNX17-207ENST00000489402 EMC4Q5J8M3 183 aa8.69□□□□□ -1.02
SNX17-207ENST00000489402 STEAP4Q687X5 459 aa8.69□□□□□ -1.02
SNX17-207ENST00000489402 ZNF585AQ6P3V2 769 aa8.69□□□□□ -1.02
SNX17-207ENST00000489402 TRMT10BQ6PF06 316 aaKnown RBP8.69□□□□□ -1.02
SNX17-207ENST00000489402 OPN5Q6U736 354 aa8.69□□□□□ -1.02
SNX17-207ENST00000489402 B3GNT6Q6ZMB0 384 aa8.69□□□□□ -1.02
SNX17-207ENST00000489402 FAM47EQ6ZV65 393 aa8.69□□□□□ -1.02
SNX17-207ENST00000489402 ZC3HC1Q86WB0 502 aaKnown RBP8.69□□□□□ -1.02
SNX17-207ENST00000489402 TCAIMQ8N3R3 496 aa8.69□□□□□ -1.02
SNX17-207ENST00000489402 FAM109AQ8N4B1 249 aa8.69□□□□□ -1.02
SNX17-207ENST00000489402 RPRMLQ8N4K4 120 aa8.69□□□□□ -1.02
SNX17-207ENST00000489402 GOLM1Q8NBJ4 401 aa8.69□□□□□ -1.02
SNX17-207ENST00000489402 MORN4Q8NDC4 146 aa8.69□□□□□ -1.02
SNX17-207ENST00000489402 TMEM52Q8NDY8 209 aa8.69□□□□□ -1.02
SNX17-207ENST00000489402 OR5L2Q8NGL0 311 aa8.69□□□□□ -1.02
SNX17-207ENST00000489402 SLCO2A1Q92959 643 aa8.69□□□□□ -1.02
SNX17-207ENST00000489402 QRFPRQ96P65 431 aa8.69□□□□□ -1.02
SNX17-207ENST00000489402 RASL10BQ96S79 203 aa8.69□□□□□ -1.02
SNX17-207ENST00000489402 FAM173AQ9BQD7 235 aa8.69□□□□□ -1.02
SNX17-207ENST00000489402 OR8D2Q9GZM6 311 aa8.69□□□□□ -1.02
SNX17-207ENST00000489402 DDX47Q9H0S4 455 aaKnown RBP8.69□□□□□ -1.02
SNX17-207ENST00000489402 LDAHQ9H6V9 325 aa8.69□□□□□ -1.02
SNX17-207ENST00000489402 NT5DC2Q9H857 520 aa8.69□□□□□ -1.02
SNX17-207ENST00000489402 CNOT10Q9H9A5 744 aaKnown RBP8.69□□□□□ -1.02
SNX17-207ENST00000489402 LIN28AQ9H9Z2 209 aaKnown RBP8.69□□□□□ -1.02
SNX17-207ENST00000489402 SACM1LQ9NTJ5 587 aa8.69□□□□□ -1.02
SNX17-207ENST00000489402 NSMCE4AQ9NXX6 385 aa8.69□□□□□ -1.02
SNX17-207ENST00000489402 WWOXQ9NZC7 414 aa8.69□□□□□ -1.02
SNX17-207ENST00000489402 GPRC5BQ9NZH0 403 aa8.69□□□□□ -1.02
SNX17-207ENST00000489402 COPS7AQ9UBW8 275 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms