RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 RNF32Q9H0A6 362 aa12.67□□□□□ -0.38
LMO4-203ENST00000489303 L2HGDHQ9H9P8 463 aa12.67□□□□□ -0.38
LMO4-203ENST00000489303 ZNF358Q9NW07 568 aa12.67□□□□□ -0.38
LMO4-203ENST00000489303 PLA2G3Q9NZ20 509 aa12.67□□□□□ -0.38
LMO4-203ENST00000489303 PSMC3IPQ9P2W1 217 aaPredicted RBP12.67□□□□□ -0.38
LMO4-203ENST00000489303 FETUBQ9UGM5 382 aa12.67□□□□□ -0.38
LMO4-203ENST00000489303 ERRFI1Q9UJM3 462 aaPredicted RBP12.67□□□□□ -0.38
LMO4-203ENST00000489303 SCN3AQ9NY46 2000 aa12.66□□□□□ -0.38
LMO4-203ENST00000489303 NUP210LQ5VU65 1888 aa12.66□□□□□ -0.38
LMO4-203ENST00000489303 TCRBV16S1A1N1A0A5B0 115 aa12.66□□□□□ -0.38
LMO4-203ENST00000489303 E2F3O00716 465 aa12.66□□□□□ -0.38
LMO4-203ENST00000489303 SIX3O95343 332 aaPredicted RBP12.66□□□□□ -0.38
LMO4-203ENST00000489303 CLDN9O95484 217 aa12.66□□□□□ -0.38
LMO4-203ENST00000489303 WDPCPO95876 746 aa12.66□□□□□ -0.38
LMO4-203ENST00000489303 FAM153BP0C7A2 387 aa12.66□□□□□ -0.38
LMO4-203ENST00000489303 PTX3P26022 381 aaPredicted RBP12.66□□□□□ -0.38
LMO4-203ENST00000489303 CERS1P27544 350 aa12.66□□□□□ -0.38
LMO4-203ENST00000489303 TNFSF10P50591 281 aa12.66□□□□□ -0.38
LMO4-203ENST00000489303 CCNG1P51959 295 aa12.66□□□□□ -0.38
LMO4-203ENST00000489303 LIM2P55344 173 aa12.66□□□□□ -0.38
LMO4-203ENST00000489303 ELOAQ14241 798 aaKnown RBP12.66□□□□□ -0.38
LMO4-203ENST00000489303 CPSF6Q16630 551 aaKnown RBP eCLIP12.66□□□□□ -0.38
LMO4-203ENST00000489303 FAM153CQ494X1 144 aa12.66□□□□□ -0.38
LMO4-203ENST00000489303 ACER2Q5QJU3 275 aa12.66□□□□□ -0.38
LMO4-203ENST00000489303 DEPDC1Q5TB30 811 aa12.66□□□□□ -0.38
LMO4-203ENST00000489303 KHDRBS2Q5VWX1 349 aaKnown RBP12.66□□□□□ -0.38
LMO4-203ENST00000489303 ADNP2Q6IQ32 1131 aa12.66□□□□□ -0.38
LMO4-203ENST00000489303 RPUSD3Q6P087 351 aaKnown RBP12.66□□□□□ -0.38
LMO4-203ENST00000489303 FAM180AQ6UWF9 173 aa12.66□□□□□ -0.38
LMO4-203ENST00000489303 LCA5Q86VQ0 697 aa12.66□□□□□ -0.38
LMO4-203ENST00000489303 FAM47BQ8NA70 645 aa12.66□□□□□ -0.38
LMO4-203ENST00000489303 CATSPER1Q8NEC5 780 aa12.66□□□□□ -0.38
LMO4-203ENST00000489303 HUS1BQ8NHY5 278 aa12.66□□□□□ -0.38
LMO4-203ENST00000489303 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.66□□□□□ -0.38
LMO4-203ENST00000489303 RGMAQ96B86 450 aa12.66□□□□□ -0.38
LMO4-203ENST00000489303 NOL11Q9H8H0 719 aaKnown RBP12.66□□□□□ -0.38
LMO4-203ENST00000489303 LYRM4Q9HD34 91 aa12.66□□□□□ -0.38
LMO4-203ENST00000489303 NECTIN3Q9NQS3 549 aa12.66□□□□□ -0.38
LMO4-203ENST00000489303 PRDM7Q9NQW5 492 aa12.66□□□□□ -0.38
LMO4-203ENST00000489303 DAPP1Q9UN19 280 aa12.66□□□□□ -0.38
LMO4-203ENST00000489303 TSC22D4Q9Y3Q8 395 aa12.66□□□□□ -0.38
LMO4-203ENST00000489303 SPTBN1Q01082 2364 aaKnown RBP12.66□□□□□ -0.38
LMO4-203ENST00000489303 IGKV3D-11A0A0A0MRZ8 115 aa12.65□□□□□ -0.38
LMO4-203ENST00000489303 OR5H15A6NDH6 313 aa12.65□□□□□ -0.38
LMO4-203ENST00000489303 LRRC14BA6NHZ5 514 aa12.65□□□□□ -0.38
LMO4-203ENST00000489303 SAGE2PA6NJ88 616 aa12.65□□□□□ -0.38
LMO4-203ENST00000489303 A8MUA0 341 aa12.65□□□□□ -0.38
LMO4-203ENST00000489303 H0YIV9 168 aa12.65□□□□□ -0.38
LMO4-203ENST00000489303 SH3BGRLO75368 114 aa12.65□□□□□ -0.38
LMO4-203ENST00000489303 CBX6O95503 412 aa12.65□□□□□ -0.38
LMO4-203ENST00000489303 CLDN1O95832 211 aa12.65□□□□□ -0.38
LMO4-203ENST00000489303 TBX6O95947 436 aaPredicted RBP12.65□□□□□ -0.38
LMO4-203ENST00000489303 HIST1H1TP22492 207 aaPredicted RBP12.65□□□□□ -0.38
LMO4-203ENST00000489303 ATP5A1P25705 553 aaKnown RBP12.65□□□□□ -0.38
LMO4-203ENST00000489303 STX4Q12846 297 aa12.65□□□□□ -0.38
LMO4-203ENST00000489303 INAQ16352 499 aa12.65□□□□□ -0.38
LMO4-203ENST00000489303 ZNF787Q6DD87 383 aa12.65□□□□□ -0.38
LMO4-203ENST00000489303 TTC19Q6DKK2 380 aaPredicted RBP12.65□□□□□ -0.38
LMO4-203ENST00000489303 OR4C11Q6IEV9 310 aa12.65□□□□□ -0.38
LMO4-203ENST00000489303 H3F3CQ6NXT2 135 aa12.65□□□□□ -0.38
LMO4-203ENST00000489303 SCUBE1Q8IWY4 988 aa12.65□□□□□ -0.38
LMO4-203ENST00000489303 GSPT2Q8IYD1 628 aaKnown RBP12.65□□□□□ -0.38
LMO4-203ENST00000489303 ACOT4Q8N9L9 421 aa12.65□□□□□ -0.38
LMO4-203ENST00000489303 L3MBTL4Q8NA19 623 aa12.65□□□□□ -0.38
LMO4-203ENST00000489303 ACMSDQ8TDX5 336 aa12.65□□□□□ -0.38
LMO4-203ENST00000489303 UBLCP1Q8WVY7 318 aaPredicted RBP12.65□□□□□ -0.38
LMO4-203ENST00000489303 MTERF1Q99551 399 aaKnown RBP12.65□□□□□ -0.38
LMO4-203ENST00000489303 OR51B5Q9H339 312 aa12.65□□□□□ -0.38
LMO4-203ENST00000489303 PNO1Q9NRX1 252 aaKnown RBP12.65□□□□□ -0.38
LMO4-203ENST00000489303 MS4A12Q9NXJ0 267 aa12.65□□□□□ -0.38
LMO4-203ENST00000489303 HIVEP3Q5T1R4 2406 aa12.64□□□□□ -0.39
LMO4-203ENST00000489303 RP1L1Q8IWN7 2480 aaPredicted RBP12.64□□□□□ -0.39
LMO4-203ENST00000489303 SAP18O00422 153 aaKnown RBP12.64□□□□□ -0.39
LMO4-203ENST00000489303 CDK2AP1O14519 115 aa12.64□□□□□ -0.39
LMO4-203ENST00000489303 CTNSO60931 367 aa12.64□□□□□ -0.39
LMO4-203ENST00000489303 F10P00742 488 aa12.64□□□□□ -0.39
LMO4-203ENST00000489303 IFNA16P05015 189 aa12.64□□□□□ -0.39
LMO4-203ENST00000489303 CPN2P22792 545 aa12.64□□□□□ -0.39
LMO4-203ENST00000489303 GCAP28676 217 aa12.64□□□□□ -0.39
LMO4-203ENST00000489303 TLX1P31314 330 aaPredicted RBP12.64□□□□□ -0.39
LMO4-203ENST00000489303 ARFIP1P53367 373 aa12.64□□□□□ -0.39
LMO4-203ENST00000489303 SERTAD2Q14140 314 aa12.64□□□□□ -0.39
LMO4-203ENST00000489303 TERF2Q15554 542 aa12.64□□□□□ -0.39
LMO4-203ENST00000489303 ZRSR2Q15696 482 aaKnown RBP12.64□□□□□ -0.39
LMO4-203ENST00000489303 C10orf62Q5T681 223 aaPredicted RBP12.64□□□□□ -0.39
LMO4-203ENST00000489303 FCRLBQ6BAA4 426 aa12.64□□□□□ -0.39
LMO4-203ENST00000489303 UBE3DQ7Z6J8 389 aa12.64□□□□□ -0.39
LMO4-203ENST00000489303 MILR1Q7Z6M3 343 aa12.64□□□□□ -0.39
LMO4-203ENST00000489303 RPS19BP1Q86WX3 136 aaKnown RBP12.64□□□□□ -0.39
LMO4-203ENST00000489303 CRLF3Q8IUI8 442 aa12.64□□□□□ -0.39
LMO4-203ENST00000489303 HOMEZQ8IX15 550 aa12.64□□□□□ -0.39
LMO4-203ENST00000489303 LGI4Q8N135 537 aa12.64□□□□□ -0.39
LMO4-203ENST00000489303 BEST3Q8N1M1 668 aa12.64□□□□□ -0.39
LMO4-203ENST00000489303 HORMAD2Q8N7B1 307 aa12.64□□□□□ -0.39
LMO4-203ENST00000489303 BCORP1Q8N888 145 aa12.64□□□□□ -0.39
LMO4-203ENST00000489303 LRRN4CLQ8ND94 238 aa12.64□□□□□ -0.39
LMO4-203ENST00000489303 ELP5Q8TE02 316 aa12.64□□□□□ -0.39
LMO4-203ENST00000489303 UTP23Q9BRU9 249 aaKnown RBP12.64□□□□□ -0.39
LMO4-203ENST00000489303 NTMT1Q9BV86 223 aa12.64□□□□□ -0.39
LMO4-203ENST00000489303 DEFB126Q9BYW3 111 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms