RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 OR56B1Q8NGI3 324 aa3.78□□□□□ -1.8
XRN1-213ENST00000489241 CCDC110Q8TBZ0 833 aa3.78□□□□□ -1.8
XRN1-213ENST00000489241 DYRK2Q92630 601 aa3.78□□□□□ -1.8
XRN1-213ENST00000489241 SYAP1Q96A49 352 aaPredicted RBP3.78□□□□□ -1.8
XRN1-213ENST00000489241 DOCK7Q96N67 2140 aa3.78□□□□□ -1.8
XRN1-213ENST00000489241 SSX3Q99909 188 aa3.78□□□□□ -1.8
XRN1-213ENST00000489241 CCM2Q9BSQ5 444 aa3.78□□□□□ -1.8
XRN1-213ENST00000489241 CCSER1Q9C0I3 900 aa3.78□□□□□ -1.8
XRN1-213ENST00000489241 EGLN1Q9GZT9 426 aa3.78□□□□□ -1.8
XRN1-213ENST00000489241 ATG10Q9H0Y0 220 aa3.78□□□□□ -1.8
XRN1-213ENST00000489241 DPH5Q9H2P9 285 aa3.78□□□□□ -1.8
XRN1-213ENST00000489241 RWDD1Q9H446 243 aaPredicted RBP3.78□□□□□ -1.8
XRN1-213ENST00000489241 SDF2L1Q9HCN8 221 aa3.78□□□□□ -1.8
XRN1-213ENST00000489241 COPS7AQ9UBW8 275 aa3.78□□□□□ -1.8
XRN1-213ENST00000489241 CLIP2Q9UDT6 1046 aa3.78□□□□□ -1.8
XRN1-213ENST00000489241 NARFQ9UHQ1 456 aa3.78□□□□□ -1.8
XRN1-213ENST00000489241 PLA2G4CQ9UP65 541 aa3.78□□□□□ -1.8
XRN1-213ENST00000489241 MRPS2Q9Y399 296 aaKnown RBP3.78□□□□□ -1.8
XRN1-213ENST00000489241 SCN5AQ14524 2016 aa3.78□□□□□ -1.8
XRN1-213ENST00000489241 A0A087WZ39 114 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 TMEM89A2RUT3 159 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 PMS2P5A8MQ11 134 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 SMIM1B2RUZ4 78 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 KLF11O14901 512 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 OR6A2O95222 327 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 SEC24AO95486 1093 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 IGHDP01880 384 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 VTNP04004 478 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 SP1P08047 785 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 ZCCHC18P0CG32 403 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 CT45A8P0DMV1 189 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 CT45A9P0DMV2 189 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 SLC2A2P11168 524 aaPredicted RBP3.77□□□□□ -1.81
XRN1-213ENST00000489241 EZRP15311 586 aaKnown RBP3.77□□□□□ -1.81
XRN1-213ENST00000489241 FCARP24071 287 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 ACKR3P25106 362 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 MARCKSP29966 332 aaPredicted RBP3.77□□□□□ -1.81
XRN1-213ENST00000489241 CCL11P51671 97 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 CCR4P51679 360 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 SSTP61278 116 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 BTG1P62324 171 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 PRKCEQ02156 737 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 CNTN1Q12860 1018 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 SGCGQ13326 291 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 TMEM132DQ14C87 1099 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 WSCD2Q2TBF2 565 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 KIAA1644Q3SXP7 199 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 CT45A2Q5DJT8 189 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 LYPLAL1Q5VWZ2 237 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 NKAIN2Q5VXU1 208 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 SLC25A47Q6Q0C1 308 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 OLFM4Q6UX06 510 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 TMEM64Q6YI46 380 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 SLC43A2Q8N370 569 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 CCDC185Q8N715 623 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 RNF148Q8N7C7 305 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 LEMD2Q8NC56 503 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 ZNF540Q8NDQ6 660 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 OR10V1Q8NGI7 309 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 OR13C5Q8NGS8 318 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 OR4L1Q8NH43 312 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 GANCQ8TET4 914 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 SMPDL3AQ92484 453 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 FBXO17Q96EF6 278 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 CXorf58Q96LI9 332 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 S1PR3Q99500 378 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 GANQ9H2C0 597 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 MARCH7Q9H992 704 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 CGNQ9P2M7 1197 aaKnown RBP3.77□□□□□ -1.81
XRN1-213ENST00000489241 IL20RAQ9UHF4 553 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 TEKT2Q9UIF3 430 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 OR1A2Q9Y585 309 aa3.77□□□□□ -1.81
XRN1-213ENST00000489241 NPC1L1Q9UHC9 1359 aa3.76□□□□□ -1.81
XRN1-213ENST00000489241 NEDD4P46934 1319 aa3.76□□□□□ -1.81
XRN1-213ENST00000489241 UMODL1Q5DID0 1318 aa3.76□□□□□ -1.81
XRN1-213ENST00000489241 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.76□□□□□ -1.81
XRN1-213ENST00000489241 GLTPD2A6NH11 291 aa3.76□□□□□ -1.81
XRN1-213ENST00000489241 F8WDY8 70 aa3.76□□□□□ -1.81
XRN1-213ENST00000489241 EEF2KO00418 725 aaKnown RBP3.76□□□□□ -1.81
XRN1-213ENST00000489241 P2RX6O15547 441 aa3.76□□□□□ -1.81
XRN1-213ENST00000489241 ADAM12O43184 909 aa3.76□□□□□ -1.81
XRN1-213ENST00000489241 NOL3O60936 208 aaKnown RBP3.76□□□□□ -1.81
XRN1-213ENST00000489241 TXNDC12O95881 172 aa3.76□□□□□ -1.81
XRN1-213ENST00000489241 CLPTM1O96005 669 aa3.76□□□□□ -1.81
XRN1-213ENST00000489241 GSTA2P09210 222 aa3.76□□□□□ -1.81
XRN1-213ENST00000489241 ERVK-10P10266 1014 aa3.76□□□□□ -1.81
XRN1-213ENST00000489241 NCF1P14598 390 aaPredicted RBP3.76□□□□□ -1.81
XRN1-213ENST00000489241 RPL35AP18077 110 aaKnown RBP3.76□□□□□ -1.81
XRN1-213ENST00000489241 CTNNA2P26232 953 aa3.76□□□□□ -1.81
XRN1-213ENST00000489241 PKLRP30613 574 aa3.76□□□□□ -1.81
XRN1-213ENST00000489241 TIMP3P35625 211 aa3.76□□□□□ -1.81
XRN1-213ENST00000489241 OR3A2P47893 321 aa3.76□□□□□ -1.81
XRN1-213ENST00000489241 LINC01547P58512 204 aaPredicted RBP3.76□□□□□ -1.81
XRN1-213ENST00000489241 HEPACAMQ14CZ8 416 aa3.76□□□□□ -1.81
XRN1-213ENST00000489241 TRADDQ15628 312 aa3.76□□□□□ -1.81
XRN1-213ENST00000489241 CARTPTQ16568 116 aa3.76□□□□□ -1.81
XRN1-213ENST00000489241 LDLRAP1Q5SW96 308 aa3.76□□□□□ -1.81
XRN1-213ENST00000489241 ZNF790Q6PG37 636 aa3.76□□□□□ -1.81
XRN1-213ENST00000489241 MEX3BQ6ZN04 569 aaKnown RBP3.76□□□□□ -1.81
XRN1-213ENST00000489241 TMEM26Q6ZUK4 368 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms