RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 TCRBV7S3A2A0A539 114 aa14.95□□□□□ -0.02
USP48-210ENST00000489108 C4orf51C9J302 202 aa14.95□□□□□ -0.02
USP48-210ENST00000489108 ZNF354AO60765 605 aaPredicted RBP14.95□□□□□ -0.02
USP48-210ENST00000489108 CCL3P10147 92 aa14.95□□□□□ -0.02
USP48-210ENST00000489108 PAMP19021 973 aa14.95□□□□□ -0.02
USP48-210ENST00000489108 HK2P52789 917 aa14.95□□□□□ -0.02
USP48-210ENST00000489108 WNT3P56703 355 aa14.95□□□□□ -0.02
USP48-210ENST00000489108 BMPR2Q13873 1038 aa14.95□□□□□ -0.02
USP48-210ENST00000489108 KCTD19Q17RG1 926 aaPredicted RBP14.95□□□□□ -0.02
USP48-210ENST00000489108 POMZP3Q6PJE2 187 aa14.95□□□□□ -0.02
USP48-210ENST00000489108 ULK2Q8IYT8 1036 aa14.95□□□□□ -0.02
USP48-210ENST00000489108 SYCE1Q8N0S2 351 aa14.95□□□□□ -0.02
USP48-210ENST00000489108 VWA5B2Q8N398 1253 aa14.95□□□□□ -0.02
USP48-210ENST00000489108 ANKRD53Q8N9V6 530 aa14.95□□□□□ -0.02
USP48-210ENST00000489108 TMEM52Q8NDY8 209 aa14.95□□□□□ -0.02
USP48-210ENST00000489108 HES6Q96HZ4 224 aa14.95□□□□□ -0.02
USP48-210ENST00000489108 COX4I2Q96KJ9 171 aa14.95□□□□□ -0.02
USP48-210ENST00000489108 AICDAQ9GZX7 198 aa14.95□□□□□ -0.02
USP48-210ENST00000489108 PRTFDC1Q9NRG1 225 aa14.95□□□□□ -0.02
USP48-210ENST00000489108 SACM1LQ9NTJ5 587 aa14.95□□□□□ -0.02
USP48-210ENST00000489108 KIAA1549Q9HCM3 1950 aa14.94□□□□□ -0.02
USP48-210ENST00000489108 MYOCOSA0A1B0GUC4 107 aa14.94□□□□□ -0.02
USP48-210ENST00000489108 URADA6NGE7 173 aa14.94□□□□□ -0.02
USP48-210ENST00000489108 KDM4EB2RXH2 506 aaPredicted RBP14.94□□□□□ -0.02
USP48-210ENST00000489108 H7C1Q1 480 aa14.94□□□□□ -0.02
USP48-210ENST00000489108 ARHGEF9O43307 516 aa14.94□□□□□ -0.02
USP48-210ENST00000489108 P04436 131 aa14.94□□□□□ -0.02
USP48-210ENST00000489108 C8GP07360 202 aa14.94□□□□□ -0.02
USP48-210ENST00000489108 CEACAM8P31997 349 aaPredicted RBP14.94□□□□□ -0.02
USP48-210ENST00000489108 AHRP35869 848 aa14.94□□□□□ -0.02
USP48-210ENST00000489108 PIGAP37287 484 aa14.94□□□□□ -0.02
USP48-210ENST00000489108 ANP32AP39687 249 aaKnown RBP14.94□□□□□ -0.02
USP48-210ENST00000489108 HNRNPFP52597 415 aaKnown RBP14.94□□□□□ -0.02
USP48-210ENST00000489108 BTN3A2P78410 334 aa14.94□□□□□ -0.02
USP48-210ENST00000489108 THOC5Q13769 683 aaKnown RBP14.94□□□□□ -0.02
USP48-210ENST00000489108 RUNX2Q13950 521 aa14.94□□□□□ -0.02
USP48-210ENST00000489108 POU4F3Q15319 338 aa14.94□□□□□ -0.02
USP48-210ENST00000489108 PHKG1Q16816 387 aa14.94□□□□□ -0.02
USP48-210ENST00000489108 HSDL2Q6YN16 418 aa14.94□□□□□ -0.02
USP48-210ENST00000489108 CXorf67Q86X51 503 aaPredicted RBP14.94□□□□□ -0.02
USP48-210ENST00000489108 PALM2Q8IXS6 379 aa14.94□□□□□ -0.02
USP48-210ENST00000489108 GOLM1Q8NBJ4 401 aa14.94□□□□□ -0.02
USP48-210ENST00000489108 OR56A3Q8NH54 315 aa14.94□□□□□ -0.02
USP48-210ENST00000489108 KIAA1191Q96A73 305 aa14.94□□□□□ -0.02
USP48-210ENST00000489108 SGCZQ96LD1 299 aa14.94□□□□□ -0.02
USP48-210ENST00000489108 TSGA10Q9BZW7 698 aa14.94□□□□□ -0.02
USP48-210ENST00000489108 EPB41L4BQ9H329 900 aa14.94□□□□□ -0.02
USP48-210ENST00000489108 ADAP2Q9NPF8 381 aa14.94□□□□□ -0.02
USP48-210ENST00000489108 MTRF1LQ9UGC7 380 aaKnown RBP14.94□□□□□ -0.02
USP48-210ENST00000489108 FOXD3Q9UJU5 478 aaPredicted RBP14.94□□□□□ -0.02
USP48-210ENST00000489108 ADAM21Q9UKJ8 722 aa14.94□□□□□ -0.02
USP48-210ENST00000489108 ATG4BQ9Y4P1 393 aa14.94□□□□□ -0.02
USP48-210ENST00000489108 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.94□□□□□ -0.02
USP48-210ENST00000489108 TLN2Q9Y4G6 2542 aa14.93□□□□□ -0.02
USP48-210ENST00000489108 NINQ8N4C6 2090 aa14.93□□□□□ -0.02
USP48-210ENST00000489108 ARID1AO14497 2285 aa14.93□□□□□ -0.02
USP48-210ENST00000489108 A0A1W2PPR1 153 aa14.93□□□□□ -0.02
USP48-210ENST00000489108 CLCA1A8K7I4 914 aa14.93□□□□□ -0.02
USP48-210ENST00000489108 EIF3FO00303 357 aaPredicted RBP14.93□□□□□ -0.02
USP48-210ENST00000489108 SMAD7O15105 426 aaKnown RBP14.93□□□□□ -0.02
USP48-210ENST00000489108 HAUS5O94927 633 aa14.93□□□□□ -0.02
USP48-210ENST00000489108 IPO7O95373 1038 aaKnown RBP14.93□□□□□ -0.02
USP48-210ENST00000489108 RFPL3SP0C7P2 107 aa14.93□□□□□ -0.02
USP48-210ENST00000489108 TERF1P54274 439 aa14.93□□□□□ -0.02
USP48-210ENST00000489108 HSD17B7P56937 341 aa14.93□□□□□ -0.02
USP48-210ENST00000489108 SLC13A2Q13183 592 aa14.93□□□□□ -0.02
USP48-210ENST00000489108 DHX34Q14147 1143 aaKnown RBP14.93□□□□□ -0.02
USP48-210ENST00000489108 CSHL1Q14406 222 aa14.93□□□□□ -0.02
USP48-210ENST00000489108 TOR1AIP1Q5JTV8 583 aa14.93□□□□□ -0.02
USP48-210ENST00000489108 DUPD1Q68J44 220 aa14.93□□□□□ -0.02
USP48-210ENST00000489108 CASC4Q6P4E1 433 aa14.93□□□□□ -0.02
USP48-210ENST00000489108 CLNKQ7Z7G1 428 aa14.93□□□□□ -0.02
USP48-210ENST00000489108 KIF18BQ86Y91 864 aa14.93□□□□□ -0.02
USP48-210ENST00000489108 TMEM132CQ8N3T6 1108 aa14.93□□□□□ -0.02
USP48-210ENST00000489108 FBXW8Q8N3Y1 598 aa14.93□□□□□ -0.02
USP48-210ENST00000489108 ZNF321PQ8N8H1 164 aa14.93□□□□□ -0.02
USP48-210ENST00000489108 NEIL2Q969S2 332 aa14.93□□□□□ -0.02
USP48-210ENST00000489108 ZNF629Q9UEG4 869 aaPredicted RBP14.93□□□□□ -0.02
USP48-210ENST00000489108 PCDHGB3Q9Y5G1 929 aa14.93□□□□□ -0.02
USP48-210ENST00000489108 COMMD10Q9Y6G5 202 aa14.93□□□□□ -0.02
USP48-210ENST00000489108 CLCA3PQ9Y6N3 262 aa14.93□□□□□ -0.02
USP48-210ENST00000489108 HIVEP2P31629 2446 aa14.92□□□□□ -0.02
USP48-210ENST00000489108 A0A0G2JN53 185 aa14.92□□□□□ -0.02
USP48-210ENST00000489108 INAFM1C9JVW0 142 aa14.92□□□□□ -0.02
USP48-210ENST00000489108 CLDN4O14493 209 aa14.92□□□□□ -0.02
USP48-210ENST00000489108 EPPINO95925 133 aa14.92□□□□□ -0.02
USP48-210ENST00000489108 HRGP04196 525 aa14.92□□□□□ -0.02
USP48-210ENST00000489108 IFNA16P05015 189 aa14.92□□□□□ -0.02
USP48-210ENST00000489108 HIST1H2AGP0C0S8 130 aaPredicted RBP14.92□□□□□ -0.02
USP48-210ENST00000489108 HIST1H2ADP20671 130 aa14.92□□□□□ -0.02
USP48-210ENST00000489108 CCZ1BP86790 482 aa14.92□□□□□ -0.02
USP48-210ENST00000489108 CCZ1P86791 482 aaPredicted RBP14.92□□□□□ -0.02
USP48-210ENST00000489108 TIAL1Q01085 375 aaKnown RBP eCLIP14.92□□□□□ -0.02
USP48-210ENST00000489108 DHX9Q08211 1270 aaKnown RBP14.92□□□□□ -0.02
USP48-210ENST00000489108 RBBP5Q15291 538 aaKnown RBP14.92□□□□□ -0.02
USP48-210ENST00000489108 Q5PR19 223 aa14.92□□□□□ -0.02
USP48-210ENST00000489108 SEL1L2Q5TEA6 688 aa14.92□□□□□ -0.02
USP48-210ENST00000489108 C4orf22Q6V702 233 aa14.92□□□□□ -0.02
USP48-210ENST00000489108 RAD9BQ6WBX8 426 aa14.92□□□□□ -0.02
USP48-210ENST00000489108 MAATS1Q7Z4T9 603 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms