RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 SUN3Q8TAQ9 357 aa23.37■■□□□ 1.33
HMGN1-217ENST00000489072 SSC4DQ8WTU2 575 aa23.37■■□□□ 1.33
HMGN1-217ENST00000489072 TBCDQ9BTW9 1192 aa23.37■■□□□ 1.33
HMGN1-217ENST00000489072 ERRFI1Q9UJM3 462 aaPredicted RBP23.37■■□□□ 1.33
HMGN1-217ENST00000489072 GABRR3A8MPY1 467 aa23.36■■□□□ 1.33
HMGN1-217ENST00000489072 SAP18O00422 153 aaKnown RBP23.36■■□□□ 1.33
HMGN1-217ENST00000489072 CLDN4O14493 209 aa23.36■■□□□ 1.33
HMGN1-217ENST00000489072 KRT38O76015 456 aa23.36■■□□□ 1.33
HMGN1-217ENST00000489072 SERPINB1P30740 379 aa23.36■■□□□ 1.33
HMGN1-217ENST00000489072 TDGF1P3P51864 188 aa23.36■■□□□ 1.33
HMGN1-217ENST00000489072 SRSF11Q05519 484 aaKnown RBP23.36■■□□□ 1.33
HMGN1-217ENST00000489072 SLC13A2Q13183 592 aa23.36■■□□□ 1.33
HMGN1-217ENST00000489072 DDX39BQ13838 428 aaKnown RBP23.36■■□□□ 1.33
HMGN1-217ENST00000489072 GTF2H2Q13888 395 aa23.36■■□□□ 1.33
HMGN1-217ENST00000489072 TMEM35AQ53FP2 167 aa23.36■■□□□ 1.33
HMGN1-217ENST00000489072 ZNF766Q5HY98 468 aa23.36■■□□□ 1.33
HMGN1-217ENST00000489072 GTF2H2CQ6P1K8 395 aa23.36■■□□□ 1.33
HMGN1-217ENST00000489072 CLNKQ7Z7G1 428 aa23.36■■□□□ 1.33
HMGN1-217ENST00000489072 RPS19BP1Q86WX3 136 aaKnown RBP23.36■■□□□ 1.33
HMGN1-217ENST00000489072 MYLK4Q86YV6 388 aaPredicted RBP23.36■■□□□ 1.33
HMGN1-217ENST00000489072 IFT20Q8IY31 132 aa23.36■■□□□ 1.33
HMGN1-217ENST00000489072 LGI4Q8N135 537 aa23.36■■□□□ 1.33
HMGN1-217ENST00000489072 PTGR2Q8N8N7 351 aaPredicted RBP23.36■■□□□ 1.33
HMGN1-217ENST00000489072 ACOT4Q8N9L9 421 aa23.36■■□□□ 1.33
HMGN1-217ENST00000489072 APCDD1LQ8NCL9 501 aa23.36■■□□□ 1.33
HMGN1-217ENST00000489072 LRRN4CLQ8ND94 238 aa23.36■■□□□ 1.33
HMGN1-217ENST00000489072 SRFBP1Q8NEF9 429 aaKnown RBP23.36■■□□□ 1.33
HMGN1-217ENST00000489072 HUS1BQ8NHY5 278 aa23.36■■□□□ 1.33
HMGN1-217ENST00000489072 TRIM44Q96DX7 344 aaPredicted RBP23.36■■□□□ 1.33
HMGN1-217ENST00000489072 MAPKAP1Q9BPZ7 522 aa23.36■■□□□ 1.33
HMGN1-217ENST00000489072 UTP23Q9BRU9 249 aaKnown RBP23.36■■□□□ 1.33
HMGN1-217ENST00000489072 ROGDIQ9GZN7 287 aa23.36■■□□□ 1.33
HMGN1-217ENST00000489072 OR51B5Q9H339 312 aa23.36■■□□□ 1.33
HMGN1-217ENST00000489072 ACTR8Q9H981 624 aa23.36■■□□□ 1.33
HMGN1-217ENST00000489072 LYRM4Q9HD34 91 aa23.36■■□□□ 1.33
HMGN1-217ENST00000489072 PRM3Q9NNZ6 103 aa23.36■■□□□ 1.33
HMGN1-217ENST00000489072 PNO1Q9NRX1 252 aaKnown RBP23.36■■□□□ 1.33
HMGN1-217ENST00000489072 ABI3Q9P2A4 366 aa23.36■■□□□ 1.33
HMGN1-217ENST00000489072 MRPS33Q9Y291 106 aaKnown RBP23.36■■□□□ 1.33
HMGN1-217ENST00000489072 MYO1DO94832 1006 aa23.35■■□□□ 1.33
HMGN1-217ENST00000489072 SCELO95171 688 aa23.35■■□□□ 1.33
HMGN1-217ENST00000489072 RHOXF2BP0C7M4 288 aa23.35■■□□□ 1.33
HMGN1-217ENST00000489072 CNTFP26441 200 aa23.35■■□□□ 1.33
HMGN1-217ENST00000489072 GCAP28676 217 aa23.35■■□□□ 1.33
HMGN1-217ENST00000489072 OR1C1Q15619 314 aa23.35■■□□□ 1.33
HMGN1-217ENST00000489072 DEPDC1Q5TB30 811 aa23.35■■□□□ 1.33
HMGN1-217ENST00000489072 ZNF468Q5VIY5 522 aaPredicted RBP23.35■■□□□ 1.33
HMGN1-217ENST00000489072 KHDRBS2Q5VWX1 349 aaKnown RBP23.35■■□□□ 1.33
HMGN1-217ENST00000489072 LIPJQ5W064 366 aa23.35■■□□□ 1.33
HMGN1-217ENST00000489072 CHSY3Q70JA7 882 aa23.35■■□□□ 1.33
HMGN1-217ENST00000489072 NR4A3Q92570 626 aa23.35■■□□□ 1.33
HMGN1-217ENST00000489072 CMTM7Q96FZ5 175 aa23.35■■□□□ 1.33
HMGN1-217ENST00000489072 RHOXF2Q9BQY4 288 aa23.35■■□□□ 1.33
HMGN1-217ENST00000489072 SORBS1Q9BX66 1292 aaKnown RBP23.35■■□□□ 1.33
HMGN1-217ENST00000489072 HES7Q9BYE0 225 aa23.35■■□□□ 1.33
HMGN1-217ENST00000489072 IPPKQ9H8X2 491 aa23.35■■□□□ 1.33
HMGN1-217ENST00000489072 DMRT3Q9NQL9 472 aa23.35■■□□□ 1.33
HMGN1-217ENST00000489072 XPR1Q9UBH6 696 aa23.35■■□□□ 1.33
HMGN1-217ENST00000489072 TNPO3Q9Y5L0 923 aaKnown RBP23.35■■□□□ 1.33
HMGN1-217ENST00000489072 MYOCOSA0A1B0GUC4 107 aa23.34■■□□□ 1.33
HMGN1-217ENST00000489072 RASAL1O95294 804 aa23.34■■□□□ 1.33
HMGN1-217ENST00000489072 ABHD2P08910 425 aa23.34■■□□□ 1.33
HMGN1-217ENST00000489072 RBP1P09455 135 aa23.34■■□□□ 1.33
HMGN1-217ENST00000489072 FAM153BP0C7A2 387 aa23.34■■□□□ 1.33
HMGN1-217ENST00000489072 HIST1H1TP22492 207 aaPredicted RBP23.34■■□□□ 1.33
HMGN1-217ENST00000489072 TPP2P29144 1249 aaPredicted RBP23.34■■□□□ 1.33
HMGN1-217ENST00000489072 EEF1DP29692 281 aaKnown RBP23.34■■□□□ 1.33
HMGN1-217ENST00000489072 PMP22Q01453 160 aa23.34■■□□□ 1.33
HMGN1-217ENST00000489072 TERF2Q15554 542 aa23.34■■□□□ 1.33
HMGN1-217ENST00000489072 FAM153CQ494X1 144 aa23.34■■□□□ 1.33
HMGN1-217ENST00000489072 SPINK14Q6IE38 97 aa23.34■■□□□ 1.33
HMGN1-217ENST00000489072 B3GNT7Q8NFL0 401 aa23.34■■□□□ 1.33
HMGN1-217ENST00000489072 PHF21BQ96EK2 531 aa23.34■■□□□ 1.33
HMGN1-217ENST00000489072 SCYL1Q96KG9 808 aa23.34■■□□□ 1.33
HMGN1-217ENST00000489072 MTERF1Q99551 399 aaKnown RBP23.34■■□□□ 1.33
HMGN1-217ENST00000489072 ADGRE2Q9UHX3 823 aa23.34■■□□□ 1.33
HMGN1-217ENST00000489072 ZNF223Q9UK11 482 aaPredicted RBP23.34■■□□□ 1.33
HMGN1-217ENST00000489072 PPIEQ9UNP9 301 aaKnown RBP23.34■■□□□ 1.33
HMGN1-217ENST00000489072 RNF11Q9Y3C5 154 aa23.34■■□□□ 1.33
HMGN1-217ENST00000489072 TSC22D4Q9Y3Q8 395 aa23.34■■□□□ 1.33
HMGN1-217ENST00000489072 EXOC1LA0A1B0GW35 172 aa23.33■■□□□ 1.33
HMGN1-217ENST00000489072 H0YIV9 168 aa23.33■■□□□ 1.33
HMGN1-217ENST00000489072 CTNSO60931 367 aa23.33■■□□□ 1.33
HMGN1-217ENST00000489072 COL6A2P12110 1019 aa23.33■■□□□ 1.33
HMGN1-217ENST00000489072 GP1BBP13224 206 aa23.33■■□□□ 1.33
HMGN1-217ENST00000489072 MST1P26927 711 aa23.33■■□□□ 1.33
HMGN1-217ENST00000489072 PIK3CBP42338 1070 aa23.33■■□□□ 1.33
HMGN1-217ENST00000489072 SSR2P43308 183 aa23.33■■□□□ 1.33
HMGN1-217ENST00000489072 GPR143P51810 404 aa23.33■■□□□ 1.33
HMGN1-217ENST00000489072 MLF1P58340 268 aa23.33■■□□□ 1.33
HMGN1-217ENST00000489072 RCN2Q14257 317 aa23.33■■□□□ 1.33
HMGN1-217ENST00000489072 TSNAXIP1Q2TAA8 658 aa23.33■■□□□ 1.33
HMGN1-217ENST00000489072 AP5B1Q2VPB7 878 aa23.33■■□□□ 1.33
HMGN1-217ENST00000489072 METTL2BQ6P1Q9 378 aaKnown RBP23.33■■□□□ 1.33
HMGN1-217ENST00000489072 L3MBTL4Q8NA19 623 aa23.33■■□□□ 1.33
HMGN1-217ENST00000489072 KLHL1Q9NR64 748 aa23.33■■□□□ 1.33
HMGN1-217ENST00000489072 OSGIN2Q9Y236 505 aa23.33■■□□□ 1.33
HMGN1-217ENST00000489072 SLC5A6Q9Y289 635 aa23.33■■□□□ 1.33
HMGN1-217ENST00000489072 PCDHGB6Q9Y5F9 930 aa23.33■■□□□ 1.33
HMGN1-217ENST00000489072 PCDHGA11Q9Y5H2 935 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms