RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 GDAP1Q8TB36 358 aa2.77□□□□□ -1.97
RFC4-213ENST00000489028 ITLN1Q8WWA0 313 aa2.77□□□□□ -1.97
RFC4-213ENST00000489028 SLC35C1Q96A29 364 aa2.77□□□□□ -1.97
RFC4-213ENST00000489028 BSCL2Q96G97 398 aaPredicted RBP2.77□□□□□ -1.97
RFC4-213ENST00000489028 TNFRSF13CQ96RJ3 184 aa2.77□□□□□ -1.97
RFC4-213ENST00000489028 PRMT1Q99873 361 aaKnown RBP2.77□□□□□ -1.97
RFC4-213ENST00000489028 MINDY3Q9H8M7 445 aa2.77□□□□□ -1.97
RFC4-213ENST00000489028 PLEKHA3Q9HB20 300 aa2.77□□□□□ -1.97
RFC4-213ENST00000489028 DEPPQ9NTK1 212 aa2.77□□□□□ -1.97
RFC4-213ENST00000489028 UBQLN2Q9UHD9 624 aa2.77□□□□□ -1.97
RFC4-213ENST00000489028 PRRC2AP48634 2157 aaKnown RBP2.76□□□□□ -1.97
RFC4-213ENST00000489028 TRAV34A0A0B4J273 112 aa2.76□□□□□ -1.97
RFC4-213ENST00000489028 A0A0U1RQG5 324 aaPredicted RBP2.76□□□□□ -1.97
RFC4-213ENST00000489028 A0A1B0GTH9 108 aa2.76□□□□□ -1.97
RFC4-213ENST00000489028 LOC390937A0A1W2PQ73 354 aa2.76□□□□□ -1.97
RFC4-213ENST00000489028 KLLNB2CW77 178 aa2.76□□□□□ -1.97
RFC4-213ENST00000489028 P2RX6O15547 441 aa2.76□□□□□ -1.97
RFC4-213ENST00000489028 SH3BGRLO75368 114 aa2.76□□□□□ -1.97
RFC4-213ENST00000489028 TGDSO95455 350 aa2.76□□□□□ -1.97
RFC4-213ENST00000489028 CALCAP01258 141 aa2.76□□□□□ -1.97
RFC4-213ENST00000489028 IGHG1P01857 330 aa2.76□□□□□ -1.97
RFC4-213ENST00000489028 IGHG3P01860 377 aa2.76□□□□□ -1.97
RFC4-213ENST00000489028 ATP6V1B1P15313 513 aa2.76□□□□□ -1.97
RFC4-213ENST00000489028 SLC1A4P43007 532 aa2.76□□□□□ -1.97
RFC4-213ENST00000489028 RIDAP52758 137 aaKnown RBP2.76□□□□□ -1.97
RFC4-213ENST00000489028 RPP38P78345 283 aaKnown RBP2.76□□□□□ -1.97
RFC4-213ENST00000489028 FOLH1Q04609 750 aa2.76□□□□□ -1.97
RFC4-213ENST00000489028 CAVIN1Q6NZI2 390 aaKnown RBP2.76□□□□□ -1.97
RFC4-213ENST00000489028 EMBQ6PCB8 327 aa2.76□□□□□ -1.97
RFC4-213ENST00000489028 SMYD1Q8NB12 490 aa2.76□□□□□ -1.97
RFC4-213ENST00000489028 ZNRF1Q8ND25 227 aa2.76□□□□□ -1.97
RFC4-213ENST00000489028 LIPHQ8WWY8 451 aa2.76□□□□□ -1.97
RFC4-213ENST00000489028 BPIFA2Q96DR5 249 aa2.76□□□□□ -1.97
RFC4-213ENST00000489028 ERO1AQ96HE7 468 aa2.76□□□□□ -1.97
RFC4-213ENST00000489028 ZNF414Q96IQ9 312 aa2.76□□□□□ -1.97
RFC4-213ENST00000489028 ALKBH3Q96Q83 286 aaPredicted RBP2.76□□□□□ -1.97
RFC4-213ENST00000489028 PINK1Q9BXM7 581 aa2.76□□□□□ -1.97
RFC4-213ENST00000489028 C2orf40Q9H1Z8 148 aa2.76□□□□□ -1.97
RFC4-213ENST00000489028 LIME1Q9H400 295 aa2.76□□□□□ -1.97
RFC4-213ENST00000489028 COPS7BQ9H9Q2 264 aaPredicted RBP2.76□□□□□ -1.97
RFC4-213ENST00000489028 CLEC5AQ9NY25 188 aa2.76□□□□□ -1.97
RFC4-213ENST00000489028 MTRRQ9UBK8 725 aa2.76□□□□□ -1.97
RFC4-213ENST00000489028 SPATA2Q9UM82 520 aa2.76□□□□□ -1.97
RFC4-213ENST00000489028 AUP1Q9Y679 476 aa2.76□□□□□ -1.97
RFC4-213ENST00000489028 POMT1Q9Y6A1 747 aa2.76□□□□□ -1.97
RFC4-213ENST00000489028 ZNF646O15015 1829 aaPredicted RBP2.75□□□□□ -1.97
RFC4-213ENST00000489028 ANKDD1BA6NHY2 528 aa2.75□□□□□ -1.97
RFC4-213ENST00000489028 TCP10L2B9ZVM9 353 aa2.75□□□□□ -1.97
RFC4-213ENST00000489028 ST8SIA3O43173 380 aa2.75□□□□□ -1.97
RFC4-213ENST00000489028 SLC7A4O43246 635 aa2.75□□□□□ -1.97
RFC4-213ENST00000489028 B4GAT1O43505 415 aa2.75□□□□□ -1.97
RFC4-213ENST00000489028 MT-ND1P03886 318 aa2.75□□□□□ -1.97
RFC4-213ENST00000489028 VIMP08670 466 aaKnown RBP2.75□□□□□ -1.97
RFC4-213ENST00000489028 FAM200BP0CF97 657 aa2.75□□□□□ -1.97
RFC4-213ENST00000489028 KRT3P12035 628 aa2.75□□□□□ -1.97
RFC4-213ENST00000489028 SLC1A3P43003 542 aa2.75□□□□□ -1.97
RFC4-213ENST00000489028 PEX3P56589 373 aa2.75□□□□□ -1.97
RFC4-213ENST00000489028 RPS27AP62979 156 aaKnown RBP2.75□□□□□ -1.97
RFC4-213ENST00000489028 GPR50Q13585 617 aa2.75□□□□□ -1.97
RFC4-213ENST00000489028 ARMCX4Q5H9R4 360 aa2.75□□□□□ -1.97
RFC4-213ENST00000489028 ZNF506Q5JVG8 444 aa2.75□□□□□ -1.97
RFC4-213ENST00000489028 MUC21Q5SSG8 566 aa2.75□□□□□ -1.97
RFC4-213ENST00000489028 PLPP4Q5VZY2 271 aa2.75□□□□□ -1.97
RFC4-213ENST00000489028 MSANTD1Q6ZTZ1 278 aa2.75□□□□□ -1.97
RFC4-213ENST00000489028 GLRX5Q86SX6 157 aa2.75□□□□□ -1.97
RFC4-213ENST00000489028 UNC45BQ8IWX7 931 aa2.75□□□□□ -1.97
RFC4-213ENST00000489028 NUP93Q8N1F7 819 aa2.75□□□□□ -1.97
RFC4-213ENST00000489028 GPD1LQ8N335 351 aa2.75□□□□□ -1.97
RFC4-213ENST00000489028 CD177Q8N6Q3 437 aa2.75□□□□□ -1.97
RFC4-213ENST00000489028 OR1B1Q8NGR6 318 aa2.75□□□□□ -1.97
RFC4-213ENST00000489028 RHOXF1Q8NHV9 184 aa2.75□□□□□ -1.97
RFC4-213ENST00000489028 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.75□□□□□ -1.97
RFC4-213ENST00000489028 AGAP11Q8TF27 550 aa2.75□□□□□ -1.97
RFC4-213ENST00000489028 SGF29Q96ES7 293 aa2.75□□□□□ -1.97
RFC4-213ENST00000489028 CCDC114Q96M63 670 aa2.75□□□□□ -1.97
RFC4-213ENST00000489028 RCHY1Q96PM5 261 aa2.75□□□□□ -1.97
RFC4-213ENST00000489028 MRPL9Q9BYD2 267 aaKnown RBP2.75□□□□□ -1.97
RFC4-213ENST00000489028 NACAP1Q9BZK3 213 aa2.75□□□□□ -1.97
RFC4-213ENST00000489028 SLITRK2Q9H156 845 aa2.75□□□□□ -1.97
RFC4-213ENST00000489028 THYN1Q9P016 225 aa2.75□□□□□ -1.97
RFC4-213ENST00000489028 NIP7Q9Y221 180 aaKnown RBP eCLIP2.75□□□□□ -1.97
RFC4-213ENST00000489028 SH3GLB1Q9Y371 365 aa2.75□□□□□ -1.97
RFC4-213ENST00000489028 A0A1W2PNU3 283 aaPredicted RBP2.74□□□□□ -1.97
RFC4-213ENST00000489028 IGLON5A6NGN9 336 aa2.74□□□□□ -1.97
RFC4-213ENST00000489028 FBP2O00757 339 aa2.74□□□□□ -1.97
RFC4-213ENST00000489028 SIX3O95343 332 aaPredicted RBP2.74□□□□□ -1.97
RFC4-213ENST00000489028 FGF19O95750 216 aa2.74□□□□□ -1.97
RFC4-213ENST00000489028 THY1P04216 161 aa2.74□□□□□ -1.97
RFC4-213ENST00000489028 CASTP20810 708 aaKnown RBP2.74□□□□□ -1.97
RFC4-213ENST00000489028 TCF7P36402 384 aaPredicted RBP2.74□□□□□ -1.97
RFC4-213ENST00000489028 ELK3P41970 407 aa2.74□□□□□ -1.97
RFC4-213ENST00000489028 TRA2BP62995 288 aaKnown RBP2.74□□□□□ -1.97
RFC4-213ENST00000489028 ABRQ12979 859 aa2.74□□□□□ -1.97
RFC4-213ENST00000489028 PTK6Q13882 451 aa2.74□□□□□ -1.97
RFC4-213ENST00000489028 ECSCRQ19T08 205 aa2.74□□□□□ -1.97
RFC4-213ENST00000489028 NHLRC3Q5JS37 347 aa2.74□□□□□ -1.97
RFC4-213ENST00000489028 SPOUT1Q5T280 376 aaKnown RBP2.74□□□□□ -1.97
RFC4-213ENST00000489028 RAPH1Q70E73 1250 aa2.74□□□□□ -1.97
RFC4-213ENST00000489028 TMUB2Q71RG4 321 aa2.74□□□□□ -1.97
RFC4-213ENST00000489028 ADCK1Q86TW2 530 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms