RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 HNRNPABQ99729 332 aaKnown RBP3.2□□□□□ -1.9
SSR1-209ENST00000488834 PRMT1Q99873 361 aaKnown RBP3.2□□□□□ -1.9
SSR1-209ENST00000488834 C17orf62Q9BQA9 187 aa3.2□□□□□ -1.9
SSR1-209ENST00000488834 MRPL9Q9BYD2 267 aaKnown RBP3.2□□□□□ -1.9
SSR1-209ENST00000488834 XPO4Q9C0E2 1151 aaKnown RBP3.2□□□□□ -1.9
SSR1-209ENST00000488834 CUEDC2Q9H467 287 aa3.2□□□□□ -1.9
SSR1-209ENST00000488834 WDR41Q9HAD4 459 aa3.2□□□□□ -1.9
SSR1-209ENST00000488834 PLEKHA3Q9HB20 300 aa3.2□□□□□ -1.9
SSR1-209ENST00000488834 TMEM161AQ9NX61 479 aa3.2□□□□□ -1.9
SSR1-209ENST00000488834 GPR83Q9NYM4 423 aa3.2□□□□□ -1.9
SSR1-209ENST00000488834 DNAJB9Q9UBS3 223 aa3.2□□□□□ -1.9
SSR1-209ENST00000488834 TMCC3Q9ULS5 477 aa3.2□□□□□ -1.9
SSR1-209ENST00000488834 MGAT4AQ9UM21 535 aa3.2□□□□□ -1.9
SSR1-209ENST00000488834 HBS1LQ9Y450 684 aaKnown RBP3.2□□□□□ -1.9
SSR1-209ENST00000488834 A0A1B0GTH9 108 aa3.19□□□□□ -1.9
SSR1-209ENST00000488834 OOEPA6NGQ2 149 aa3.19□□□□□ -1.9
SSR1-209ENST00000488834 C19orf81C9J6K1 198 aa3.19□□□□□ -1.9
SSR1-209ENST00000488834 LMO7DNF2Z398 122 aa3.19□□□□□ -1.9
SSR1-209ENST00000488834 CLN5O75503 358 aa3.19□□□□□ -1.9
SSR1-209ENST00000488834 IGHDP01880 384 aa3.19□□□□□ -1.9
SSR1-209ENST00000488834 LYNP07948 512 aa3.19□□□□□ -1.9
SSR1-209ENST00000488834 SUPT20HL2P0C7V6 817 aa3.19□□□□□ -1.9
SSR1-209ENST00000488834 KRT3P12035 628 aa3.19□□□□□ -1.9
SSR1-209ENST00000488834 SELEP16581 610 aa3.19□□□□□ -1.9
SSR1-209ENST00000488834 ATP5DP30049 168 aa3.19□□□□□ -1.9
SSR1-209ENST00000488834 OR3A1P47881 315 aa3.19□□□□□ -1.9
SSR1-209ENST00000488834 KCNJ1P48048 391 aa3.19□□□□□ -1.9
SSR1-209ENST00000488834 NOVP48745 357 aa3.19□□□□□ -1.9
SSR1-209ENST00000488834 ACY1Q03154 408 aa3.19□□□□□ -1.9
SSR1-209ENST00000488834 YWHAHQ04917 246 aaPredicted RBP3.19□□□□□ -1.9
SSR1-209ENST00000488834 C15orf32Q32M92 178 aa3.19□□□□□ -1.9
SSR1-209ENST00000488834 IQCCQ4KMZ1 466 aa3.19□□□□□ -1.9
SSR1-209ENST00000488834 CCDC158Q5M9N0 1113 aa3.19□□□□□ -1.9
SSR1-209ENST00000488834 LYPLAL1Q5VWZ2 237 aa3.19□□□□□ -1.9
SSR1-209ENST00000488834 PM20D1Q6GTS8 502 aa3.19□□□□□ -1.9
SSR1-209ENST00000488834 TMUB2Q71RG4 321 aa3.19□□□□□ -1.9
SSR1-209ENST00000488834 CCDC91Q7Z6B0 441 aa3.19□□□□□ -1.9
SSR1-209ENST00000488834 PHC2Q8IXK0 858 aa3.19□□□□□ -1.9
SSR1-209ENST00000488834 TDHQ8IZJ6 230 aa3.19□□□□□ -1.9
SSR1-209ENST00000488834 ZNF444Q8N0Y2 327 aaPredicted RBP3.19□□□□□ -1.9
SSR1-209ENST00000488834 TMEM99Q8N816 258 aa3.19□□□□□ -1.9
SSR1-209ENST00000488834 C4orf32Q8N8J7 132 aa3.19□□□□□ -1.9
SSR1-209ENST00000488834 BANPQ8N9N5 519 aa3.19□□□□□ -1.9
SSR1-209ENST00000488834 UXS1Q8NBZ7 420 aa3.19□□□□□ -1.9
SSR1-209ENST00000488834 SNX21Q969T3 373 aa3.19□□□□□ -1.9
SSR1-209ENST00000488834 SLC35C1Q96A29 364 aa3.19□□□□□ -1.9
SSR1-209ENST00000488834 RFT1Q96AA3 541 aa3.19□□□□□ -1.9
SSR1-209ENST00000488834 TAAR6Q96RI8 345 aa3.19□□□□□ -1.9
SSR1-209ENST00000488834 TNFRSF13CQ96RJ3 184 aa3.19□□□□□ -1.9
SSR1-209ENST00000488834 UTP14AQ9BVJ6 771 aaKnown RBP3.19□□□□□ -1.9
SSR1-209ENST00000488834 SLC39A8Q9C0K1 460 aa3.19□□□□□ -1.9
SSR1-209ENST00000488834 ARGLU1Q9NWB6 273 aaPredicted RBP3.19□□□□□ -1.9
SSR1-209ENST00000488834 SEPT10Q9P0V9 454 aa3.19□□□□□ -1.9
SSR1-209ENST00000488834 CDH7Q9ULB5 785 aa3.19□□□□□ -1.9
SSR1-209ENST00000488834 ITM2BQ9Y287 266 aa3.19□□□□□ -1.9
SSR1-209ENST00000488834 TMED7Q9Y3B3 224 aa3.19□□□□□ -1.9
SSR1-209ENST00000488834 PCNX3Q9H6A9 2034 aa3.19□□□□□ -1.9
SSR1-209ENST00000488834 PFASO15067 1338 aa3.19□□□□□ -1.9
SSR1-209ENST00000488834 SPATA31D1Q6ZQQ2 1576 aa3.18□□□□□ -1.9
SSR1-209ENST00000488834 A0A1B0GVY2 172 aa3.18□□□□□ -1.9
SSR1-209ENST00000488834 GPRIN2O60269 458 aa3.18□□□□□ -1.9
SSR1-209ENST00000488834 HMMRO75330 724 aa3.18□□□□□ -1.9
SSR1-209ENST00000488834 SH3BGRLO75368 114 aa3.18□□□□□ -1.9
SSR1-209ENST00000488834 LETM1O95202 739 aaPredicted RBP3.18□□□□□ -1.9
SSR1-209ENST00000488834 TGDSO95455 350 aa3.18□□□□□ -1.9
SSR1-209ENST00000488834 CALCAP01258 141 aa3.18□□□□□ -1.9
SSR1-209ENST00000488834 EZRP15311 586 aaKnown RBP3.18□□□□□ -1.9
SSR1-209ENST00000488834 LMO2P25791 158 aa3.18□□□□□ -1.9
SSR1-209ENST00000488834 KRT2P35908 639 aa3.18□□□□□ -1.9
SSR1-209ENST00000488834 IER3P46695 156 aa3.18□□□□□ -1.9
SSR1-209ENST00000488834 KHKP50053 298 aa3.18□□□□□ -1.9
SSR1-209ENST00000488834 ZNF131P52739 623 aa3.18□□□□□ -1.9
SSR1-209ENST00000488834 LIMK2P53671 638 aa3.18□□□□□ -1.9
SSR1-209ENST00000488834 BPIFB3P59826 476 aa3.18□□□□□ -1.9
SSR1-209ENST00000488834 FKBP1BP68106 108 aa3.18□□□□□ -1.9
SSR1-209ENST00000488834 SMC1AQ14683 1233 aaKnown RBP3.18□□□□□ -1.9
SSR1-209ENST00000488834 SIX1Q15475 284 aaPredicted RBP3.18□□□□□ -1.9
SSR1-209ENST00000488834 C3AR1Q16581 482 aa3.18□□□□□ -1.9
SSR1-209ENST00000488834 ANKRD20A4Q4UJ75 823 aa3.18□□□□□ -1.9
SSR1-209ENST00000488834 ANKRD20A8PQ5CZ79 823 aa3.18□□□□□ -1.9
SSR1-209ENST00000488834 ANKRD20A2Q5SQ80 823 aa3.18□□□□□ -1.9
SSR1-209ENST00000488834 MUC21Q5SSG8 566 aa3.18□□□□□ -1.9
SSR1-209ENST00000488834 ANKRD20A1Q5TYW2 823 aa3.18□□□□□ -1.9
SSR1-209ENST00000488834 AGAP7PQ5VUJ5 663 aa3.18□□□□□ -1.9
SSR1-209ENST00000488834 ANKRD20A3Q5VUR7 823 aa3.18□□□□□ -1.9
SSR1-209ENST00000488834 ZNF770Q6IQ21 691 aaPredicted RBP3.18□□□□□ -1.9
SSR1-209ENST00000488834 PLBD1Q6P4A8 553 aa3.18□□□□□ -1.9
SSR1-209ENST00000488834 ALKBH5Q6P6C2 394 aaKnown RBP3.18□□□□□ -1.9
SSR1-209ENST00000488834 OTOAQ7RTW8 1153 aa3.18□□□□□ -1.9
SSR1-209ENST00000488834 IQCA1Q86XH1 822 aa3.18□□□□□ -1.9
SSR1-209ENST00000488834 HPS6Q86YV9 775 aa3.18□□□□□ -1.9
SSR1-209ENST00000488834 TBC1D10CQ8IV04 446 aa3.18□□□□□ -1.9
SSR1-209ENST00000488834 MSANTD4Q8NCY6 345 aa3.18□□□□□ -1.9
SSR1-209ENST00000488834 OR4Q3Q8NH05 313 aa3.18□□□□□ -1.9
SSR1-209ENST00000488834 MGARPQ8TDB4 240 aa3.18□□□□□ -1.9
SSR1-209ENST00000488834 ANP32BQ92688 251 aaKnown RBP3.18□□□□□ -1.9
SSR1-209ENST00000488834 ALKBH3Q96Q83 286 aaPredicted RBP3.18□□□□□ -1.9
SSR1-209ENST00000488834 MLPHQ9BV36 600 aaPredicted RBP3.18□□□□□ -1.9
SSR1-209ENST00000488834 PINK1Q9BXM7 581 aa3.18□□□□□ -1.9
SSR1-209ENST00000488834 VIPAS39Q9H9C1 493 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms