RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 HSPA13P48723 471 aa18.4■□□□□ 0.54
CCM2-216ENST00000488727 CLCN2P51788 898 aa18.4■□□□□ 0.54
CCM2-216ENST00000488727 EMX2Q04743 252 aa18.4■□□□□ 0.54
CCM2-216ENST00000488727 SMU1Q2TAY7 513 aa18.4■□□□□ 0.54
CCM2-216ENST00000488727 DCAF12Q5T6F0 453 aa18.4■□□□□ 0.54
CCM2-216ENST00000488727 ADNP2Q6IQ32 1131 aa18.4■□□□□ 0.54
CCM2-216ENST00000488727 PWWP2BQ6NUJ5 590 aa18.4■□□□□ 0.54
CCM2-216ENST00000488727 IGF2-ASQ6U949 168 aa18.4■□□□□ 0.54
CCM2-216ENST00000488727 DHFR2Q86XF0 187 aa18.4■□□□□ 0.54
CCM2-216ENST00000488727 AQP12AQ8IXF9 295 aa18.4■□□□□ 0.54
CCM2-216ENST00000488727 EFCAB11Q9BUY7 163 aa18.4■□□□□ 0.54
CCM2-216ENST00000488727 NTMT1Q9BV86 223 aa18.4■□□□□ 0.54
CCM2-216ENST00000488727 Q9H521 79 aa18.4■□□□□ 0.54
CCM2-216ENST00000488727 ACTR8Q9H981 624 aa18.4■□□□□ 0.54
CCM2-216ENST00000488727 RNF11Q9Y3C5 154 aa18.4■□□□□ 0.54
CCM2-216ENST00000488727 PCDHGA3Q9Y5H0 932 aa18.4■□□□□ 0.54
CCM2-216ENST00000488727 PCDHA9Q9Y5H5 950 aa18.4■□□□□ 0.54
CCM2-216ENST00000488727 SDK2Q58EX2 2172 aa18.39■□□□□ 0.53
CCM2-216ENST00000488727 ASPDHA6ND91 283 aa18.39■□□□□ 0.53
CCM2-216ENST00000488727 CDRT15L2A8MXV6 281 aa18.39■□□□□ 0.53
CCM2-216ENST00000488727 P2RX6O15547 441 aa18.39■□□□□ 0.53
CCM2-216ENST00000488727 BRINP1O60477 761 aa18.39■□□□□ 0.53
CCM2-216ENST00000488727 SRPX2O60687 465 aaPredicted RBP18.39■□□□□ 0.53
CCM2-216ENST00000488727 OR2B3O76000 313 aa18.39■□□□□ 0.53
CCM2-216ENST00000488727 DXOO77932 396 aaKnown RBP18.39■□□□□ 0.53
CCM2-216ENST00000488727 NPPAP01160 153 aa18.39■□□□□ 0.53
CCM2-216ENST00000488727 UBTFL6P0CB48 400 aaPredicted RBP18.39■□□□□ 0.53
CCM2-216ENST00000488727 HTR6P50406 440 aa18.39■□□□□ 0.53
CCM2-216ENST00000488727 POLR2JP52435 117 aaKnown RBP18.39■□□□□ 0.53
CCM2-216ENST00000488727 ITGA1P56199 1179 aa18.39■□□□□ 0.53
CCM2-216ENST00000488727 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.39■□□□□ 0.53
CCM2-216ENST00000488727 LCN8Q6JVE9 175 aa18.39■□□□□ 0.53
CCM2-216ENST00000488727 TMIGD1Q6UXZ0 262 aa18.39■□□□□ 0.53
CCM2-216ENST00000488727 CEACAM20Q6UY09 585 aa18.39■□□□□ 0.53
CCM2-216ENST00000488727 ZFAND4Q86XD8 727 aa18.39■□□□□ 0.53
CCM2-216ENST00000488727 MARVELD2Q8N4S9 558 aa18.39■□□□□ 0.53
CCM2-216ENST00000488727 MFSD9Q8NBP5 474 aa18.39■□□□□ 0.53
CCM2-216ENST00000488727 OR8K5Q8NH50 307 aa18.39■□□□□ 0.53
CCM2-216ENST00000488727 SLCO4A1Q96BD0 722 aa18.39■□□□□ 0.53
CCM2-216ENST00000488727 NXPE2Q96DL1 559 aa18.39■□□□□ 0.53
CCM2-216ENST00000488727 EFHD1Q9BUP0 239 aa18.39■□□□□ 0.53
CCM2-216ENST00000488727 ENAMQ9NRM1 1142 aa18.39■□□□□ 0.53
CCM2-216ENST00000488727 CMTM6Q9NX76 183 aa18.39■□□□□ 0.53
CCM2-216ENST00000488727 TRPS1Q9UHF7 1281 aa18.39■□□□□ 0.53
CCM2-216ENST00000488727 SERTAD3Q9UJW9 196 aa18.39■□□□□ 0.53
CCM2-216ENST00000488727 ZNF490Q9ULM2 529 aaPredicted RBP18.39■□□□□ 0.53
CCM2-216ENST00000488727 CEP295Q9C0D2 2601 aa18.39■□□□□ 0.53
CCM2-216ENST00000488727 CCDC154A6NI56 674 aa18.38■□□□□ 0.53
CCM2-216ENST00000488727 LSM1O15116 133 aaKnown RBP18.38■□□□□ 0.53
CCM2-216ENST00000488727 UGDHO60701 494 aa18.38■□□□□ 0.53
CCM2-216ENST00000488727 EIF2S1P05198 315 aaKnown RBP18.38■□□□□ 0.53
CCM2-216ENST00000488727 ZNF28P17035 718 aa18.38■□□□□ 0.53
CCM2-216ENST00000488727 CXCR2P25025 360 aa18.38■□□□□ 0.53
CCM2-216ENST00000488727 UFM1P61960 85 aa18.38■□□□□ 0.53
CCM2-216ENST00000488727 FOLH1Q04609 750 aa18.38■□□□□ 0.53
CCM2-216ENST00000488727 RBBP5Q15291 538 aaKnown RBP18.38■□□□□ 0.53
CCM2-216ENST00000488727 TLR1Q15399 786 aa18.38■□□□□ 0.53
CCM2-216ENST00000488727 HKDC1Q2TB90 917 aa18.38■□□□□ 0.53
CCM2-216ENST00000488727 LIPJQ5W064 366 aa18.38■□□□□ 0.53
CCM2-216ENST00000488727 GRHL2Q6ISB3 625 aa18.38■□□□□ 0.53
CCM2-216ENST00000488727 SCIMPQ6UWF3 145 aa18.38■□□□□ 0.53
CCM2-216ENST00000488727 MILR1Q7Z6M3 343 aa18.38■□□□□ 0.53
CCM2-216ENST00000488727 BPHLQ86WA6 291 aaPredicted RBP18.38■□□□□ 0.53
CCM2-216ENST00000488727 KRT78Q8N1N4 520 aa18.38■□□□□ 0.53
CCM2-216ENST00000488727 L3MBTL4Q8NA19 623 aa18.38■□□□□ 0.53
CCM2-216ENST00000488727 FNDC5Q8NAU1 212 aa18.38■□□□□ 0.53
CCM2-216ENST00000488727 TMEM125Q96AQ2 219 aa18.38■□□□□ 0.53
CCM2-216ENST00000488727 TEX37Q96LM6 180 aa18.38■□□□□ 0.53
CCM2-216ENST00000488727 MACROD1Q9BQ69 325 aa18.38■□□□□ 0.53
CCM2-216ENST00000488727 ASPSCR1Q9BZE9 553 aa18.38■□□□□ 0.53
CCM2-216ENST00000488727 ARMC1Q9NVT9 282 aa18.38■□□□□ 0.53
CCM2-216ENST00000488727 AK5Q9Y6K8 562 aa18.38■□□□□ 0.53
CCM2-216ENST00000488727 FER1L5A0AVI2 2057 aa18.38■□□□□ 0.53
CCM2-216ENST00000488727 C15orf38-AP3S2A0A0A6YYH1 394 aa18.37■□□□□ 0.53
CCM2-216ENST00000488727 CLDN9O95484 217 aa18.37■□□□□ 0.53
CCM2-216ENST00000488727 ATP6V1B2P21281 511 aa18.37■□□□□ 0.53
CCM2-216ENST00000488727 RBMS1P29558 406 aaKnown RBP18.37■□□□□ 0.53
CCM2-216ENST00000488727 HMOX2P30519 316 aa18.37■□□□□ 0.53
CCM2-216ENST00000488727 SLC5A2P31639 672 aa18.37■□□□□ 0.53
CCM2-216ENST00000488727 ARL1P40616 181 aaPredicted RBP18.37■□□□□ 0.53
CCM2-216ENST00000488727 NFYCQ13952 458 aa18.37■□□□□ 0.53
CCM2-216ENST00000488727 ARPINQ7Z6K5 226 aa18.37■□□□□ 0.53
CCM2-216ENST00000488727 GPR135Q8IZ08 494 aa18.37■□□□□ 0.53
CCM2-216ENST00000488727 ZNF655Q8N720 491 aaPredicted RBP18.37■□□□□ 0.53
CCM2-216ENST00000488727 RERGQ96A58 199 aaPredicted RBP18.37■□□□□ 0.53
CCM2-216ENST00000488727 TM4SF19Q96DZ7 209 aa18.37■□□□□ 0.53
CCM2-216ENST00000488727 THAP11Q96EK4 314 aa18.37■□□□□ 0.53
CCM2-216ENST00000488727 PPP3R2Q96LZ3 170 aa18.37■□□□□ 0.53
CCM2-216ENST00000488727 TEFMQ96QE5 360 aaKnown RBP18.37■□□□□ 0.53
CCM2-216ENST00000488727 C1orf50Q9BV19 199 aa18.37■□□□□ 0.53
CCM2-216ENST00000488727 PITHD1Q9GZP4 211 aaPredicted RBP18.37■□□□□ 0.53
CCM2-216ENST00000488727 IRAK4Q9NWZ3 460 aa18.37■□□□□ 0.53
CCM2-216ENST00000488727 ACTR3BQ9P1U1 418 aa18.37■□□□□ 0.53
CCM2-216ENST00000488727 CCL27Q9Y4X3 112 aa18.37■□□□□ 0.53
CCM2-216ENST00000488727 AP1M2Q9Y6Q5 423 aa18.37■□□□□ 0.53
CCM2-216ENST00000488727 FRYQ5TBA9 3013 aa18.37■□□□□ 0.53
CCM2-216ENST00000488727 C9JVG2 144 aa18.37■□□□□ 0.53
CCM2-216ENST00000488727 ZSCAN9O15535 394 aaPredicted RBP18.37■□□□□ 0.53
CCM2-216ENST00000488727 DNAJA2O60884 412 aa18.37■□□□□ 0.53
CCM2-216ENST00000488727 SCRG1O75711 98 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms