RNA–Protein interactions for RNA: ENST00000488543.1

HDAC6-230, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-230ENST00000488543 DHPSP49366 369 aaPredicted RBP11.59□□□□□ -0.55
HDAC6-230ENST00000488543 PSMD7P51665 324 aa11.59□□□□□ -0.55
HDAC6-230ENST00000488543 ESRRGP62508 458 aa11.59□□□□□ -0.55
HDAC6-230ENST00000488543 CYP4F2P78329 520 aa11.59□□□□□ -0.55
HDAC6-230ENST00000488543 ZNF763Q0D2J5 394 aa11.59□□□□□ -0.55
HDAC6-230ENST00000488543 BNIP3Q12983 259 aa11.59□□□□□ -0.55
HDAC6-230ENST00000488543 DUOXA1Q1HG43 343 aa11.59□□□□□ -0.55
HDAC6-230ENST00000488543 ZNF385BQ569K4 471 aa11.59□□□□□ -0.55
HDAC6-230ENST00000488543 TMTC4Q5T4D3 741 aa11.59□□□□□ -0.55
HDAC6-230ENST00000488543 CALHM3Q86XJ0 350 aa11.59□□□□□ -0.55
HDAC6-230ENST00000488543 GOLM1Q8NBJ4 401 aa11.59□□□□□ -0.55
HDAC6-230ENST00000488543 ZNF548Q8NEK5 533 aaPredicted RBP11.59□□□□□ -0.55
HDAC6-230ENST00000488543 OR4E2Q8NGC2 313 aa11.59□□□□□ -0.55
HDAC6-230ENST00000488543 C16orf78Q8WTQ4 265 aa11.59□□□□□ -0.55
HDAC6-230ENST00000488543 FIG4Q92562 907 aa11.59□□□□□ -0.55
HDAC6-230ENST00000488543 TMBIM1Q969X1 311 aa11.59□□□□□ -0.55
HDAC6-230ENST00000488543 COQ8BQ96D53 544 aa11.59□□□□□ -0.55
HDAC6-230ENST00000488543 AURKBQ96GD4 344 aaPredicted RBP11.59□□□□□ -0.55
HDAC6-230ENST00000488543 IER2Q9BTL4 223 aa11.59□□□□□ -0.55
HDAC6-230ENST00000488543 PITHD1Q9GZP4 211 aaPredicted RBP11.59□□□□□ -0.55
HDAC6-230ENST00000488543 PRM3Q9NNZ6 103 aa11.59□□□□□ -0.55
HDAC6-230ENST00000488543 FAM120CQ9NX05 1096 aaKnown RBP11.59□□□□□ -0.55
HDAC6-230ENST00000488543 IFT80Q9P2H3 777 aaPredicted RBP11.59□□□□□ -0.55
HDAC6-230ENST00000488543 ADGRE2Q9UHX3 823 aa11.59□□□□□ -0.55
HDAC6-230ENST00000488543 ATP6V1HQ9UI12 483 aa11.59□□□□□ -0.55
HDAC6-230ENST00000488543 GNG14A0A1W2PPG7 69 aa11.59□□□□□ -0.55
HDAC6-230ENST00000488543 BCAT2O15382 392 aaPredicted RBP11.59□□□□□ -0.55
HDAC6-230ENST00000488543 GPIP06744 558 aa11.59□□□□□ -0.55
HDAC6-230ENST00000488543 MATN1P21941 496 aa11.59□□□□□ -0.55
HDAC6-230ENST00000488543 TRPC1P48995 793 aa11.59□□□□□ -0.55
HDAC6-230ENST00000488543 DEPDC1Q5TB30 811 aa11.59□□□□□ -0.55
HDAC6-230ENST00000488543 STK32CQ86UX6 486 aa11.59□□□□□ -0.55
HDAC6-230ENST00000488543 CLECL1Q8IZS7 167 aa11.59□□□□□ -0.55
HDAC6-230ENST00000488543 NAGSQ8N159 534 aa11.59□□□□□ -0.55
HDAC6-230ENST00000488543 FAM46DQ8NEK8 389 aa11.59□□□□□ -0.55
HDAC6-230ENST00000488543 OR10A6Q8NH74 314 aa11.59□□□□□ -0.55
HDAC6-230ENST00000488543 STARD8Q92502 1023 aa11.59□□□□□ -0.55
HDAC6-230ENST00000488543 CCDC115Q96NT0 180 aa11.59□□□□□ -0.55
HDAC6-230ENST00000488543 TWSG1Q9GZX9 223 aa11.59□□□□□ -0.55
HDAC6-230ENST00000488543 KAT8Q9H7Z6 458 aaKnown RBP11.59□□□□□ -0.55
HDAC6-230ENST00000488543 FANCEQ9HB96 536 aa11.59□□□□□ -0.55
HDAC6-230ENST00000488543 MYNNQ9NPC7 610 aa11.59□□□□□ -0.55
HDAC6-230ENST00000488543 DNAAF2Q9NVR5 837 aaKnown RBP11.59□□□□□ -0.55
HDAC6-230ENST00000488543 COLEC10Q9Y6Z7 277 aa11.59□□□□□ -0.55
HDAC6-230ENST00000488543 A0A1B0GVT2 93 aa11.58□□□□□ -0.56
HDAC6-230ENST00000488543 UPK1AO00322 258 aa11.58□□□□□ -0.56
HDAC6-230ENST00000488543 PLPP1O14494 284 aa11.58□□□□□ -0.56
HDAC6-230ENST00000488543 RFXANKO14593 260 aa11.58□□□□□ -0.56
HDAC6-230ENST00000488543 MAN1A2O60476 641 aa11.58□□□□□ -0.56
HDAC6-230ENST00000488543 SEMA3DO95025 777 aa11.58□□□□□ -0.56
HDAC6-230ENST00000488543 CSF2P04141 144 aa11.58□□□□□ -0.56
HDAC6-230ENST00000488543 KLK1P06870 262 aa11.58□□□□□ -0.56
HDAC6-230ENST00000488543 GGT1P19440 569 aa11.58□□□□□ -0.56
HDAC6-230ENST00000488543 SERPINB1P30740 379 aa11.58□□□□□ -0.56
HDAC6-230ENST00000488543 HPCAL1P37235 193 aa11.58□□□□□ -0.56
HDAC6-230ENST00000488543 PDE7AQ13946 482 aa11.58□□□□□ -0.56
HDAC6-230ENST00000488543 PRSS53Q2L4Q9 553 aa11.58□□□□□ -0.56
HDAC6-230ENST00000488543 KHDRBS2Q5VWX1 349 aaKnown RBP11.58□□□□□ -0.56
HDAC6-230ENST00000488543 FAM71E1Q6IPT2 247 aa11.58□□□□□ -0.56
HDAC6-230ENST00000488543 ZNF551Q7Z340 670 aaPredicted RBP11.58□□□□□ -0.56
HDAC6-230ENST00000488543 GPR155Q7Z3F1 870 aa11.58□□□□□ -0.56
HDAC6-230ENST00000488543 ZNF761Q86XN6 746 aaPredicted RBP11.58□□□□□ -0.56
HDAC6-230ENST00000488543 PROSER1Q86XN7 944 aa11.58□□□□□ -0.56
HDAC6-230ENST00000488543 PLD3Q8IV08 490 aa11.58□□□□□ -0.56
HDAC6-230ENST00000488543 TMEM132CQ8N3T6 1108 aa11.58□□□□□ -0.56
HDAC6-230ENST00000488543 FBXL6Q8N531 539 aa11.58□□□□□ -0.56
HDAC6-230ENST00000488543 PACRGLQ8N7B6 248 aa11.58□□□□□ -0.56
HDAC6-230ENST00000488543 TNIP2Q8NFZ5 429 aa11.58□□□□□ -0.56
HDAC6-230ENST00000488543 TANKQ92844 425 aa11.58□□□□□ -0.56
HDAC6-230ENST00000488543 NSMCE2Q96MF7 247 aa11.58□□□□□ -0.56
HDAC6-230ENST00000488543 F2RL3Q96RI0 385 aa11.58□□□□□ -0.56
HDAC6-230ENST00000488543 THUMPD3Q9BV44 507 aaKnown RBP11.58□□□□□ -0.56
HDAC6-230ENST00000488543 DUSP26Q9BV47 211 aa11.58□□□□□ -0.56
HDAC6-230ENST00000488543 AICDAQ9GZX7 198 aa11.58□□□□□ -0.56
HDAC6-230ENST00000488543 FSCN3Q9NQT6 498 aa11.58□□□□□ -0.56
HDAC6-230ENST00000488543 AASSQ9UDR5 926 aa11.58□□□□□ -0.56
HDAC6-230ENST00000488543 MAPRE3Q9UPY8 281 aa11.58□□□□□ -0.56
HDAC6-230ENST00000488543 CCDC163A0A0D9SF12 145 aa11.58□□□□□ -0.56
HDAC6-230ENST00000488543 ANKDD1BA6NHY2 528 aa11.58□□□□□ -0.56
HDAC6-230ENST00000488543 J3QRK9 145 aa11.58□□□□□ -0.56
HDAC6-230ENST00000488543 ZNF182P17025 639 aaPredicted RBP11.58□□□□□ -0.56
HDAC6-230ENST00000488543 EFNA1P20827 205 aaPredicted RBP11.58□□□□□ -0.56
HDAC6-230ENST00000488543 PRKACGP22612 351 aa11.58□□□□□ -0.56
HDAC6-230ENST00000488543 TPP2P29144 1249 aaPredicted RBP11.58□□□□□ -0.56
HDAC6-230ENST00000488543 NXPH1P58417 271 aa11.58□□□□□ -0.56
HDAC6-230ENST00000488543 MC1RQ01726 317 aa11.58□□□□□ -0.56
HDAC6-230ENST00000488543 SLC14A1Q13336 389 aa11.58□□□□□ -0.56
HDAC6-230ENST00000488543 CPTPQ5TA50 214 aa11.58□□□□□ -0.56
HDAC6-230ENST00000488543 BPIFB6Q8NFQ5 453 aa11.58□□□□□ -0.56
HDAC6-230ENST00000488543 OR2L3Q8NG85 312 aa11.58□□□□□ -0.56
HDAC6-230ENST00000488543 LMX1AQ8TE12 382 aa11.58□□□□□ -0.56
HDAC6-230ENST00000488543 CREB3L4Q8TEY5 395 aa11.58□□□□□ -0.56
HDAC6-230ENST00000488543 CXorf40BQ96DE9 158 aa11.58□□□□□ -0.56
HDAC6-230ENST00000488543 SH3GL1Q99961 368 aa11.58□□□□□ -0.56
HDAC6-230ENST00000488543 GSDMCQ9BYG8 508 aa11.58□□□□□ -0.56
HDAC6-230ENST00000488543 REEP4Q9H6H4 257 aa11.58□□□□□ -0.56
HDAC6-230ENST00000488543 LHX9Q9NQ69 397 aa11.58□□□□□ -0.56
HDAC6-230ENST00000488543 UCKL1Q9NWZ5 548 aa11.58□□□□□ -0.56
HDAC6-230ENST00000488543 MAGEL2Q9UJ55 1249 aa11.58□□□□□ -0.56
HDAC6-230ENST00000488543 TRBC2A0A5B9 178 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms