RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 MRGPRGQ86SM5 289 aa10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 TBC1D1Q86TI0 1168 aaPredicted RBP10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 ZNF227Q86WZ6 799 aa10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 LURAP1LQ8IV03 231 aa10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 SCUBE1Q8IWY4 988 aa10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 HORMAD2Q8N7B1 307 aa10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 APCDD1LQ8NCL9 501 aa10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 B3GNT7Q8NFL0 401 aa10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 STAG3L4Q8TBR4 150 aa10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 KCTD4Q8WVF5 259 aa10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 GPR137Q96N19 417 aa10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 FRMD6Q96NE9 622 aa10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 SERINC2Q96SA4 455 aa10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 LRRC1Q9BTT6 524 aa10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 NPLQ9BXD5 320 aaPredicted RBP10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 CD244Q9BZW8 370 aa10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 NMRAL1Q9HBL8 299 aa10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 PRDM7Q9NQW5 492 aa10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 IGSF5Q9NSI5 407 aa10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 ZNF223Q9UK11 482 aaPredicted RBP10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 DAPP1Q9UN19 280 aa10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 MRPS33Q9Y291 106 aaKnown RBP10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 PCDHGB6Q9Y5F9 930 aa10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 CLDN16Q9Y5I7 305 aa10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 EXPH5Q8NEV8 1989 aa10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 MED12Q93074 2177 aa10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 ABCA12Q86UK0 2595 aa10.54□□□□□ -0.72
NIPAL3-207ENST00000488155 ASPDHA6ND91 283 aa10.54□□□□□ -0.72
NIPAL3-207ENST00000488155 LRRC14BA6NHZ5 514 aa10.54□□□□□ -0.72
NIPAL3-207ENST00000488155 CLDN4O14493 209 aa10.54□□□□□ -0.72
NIPAL3-207ENST00000488155 FCHO1O14526 889 aa10.54□□□□□ -0.72
NIPAL3-207ENST00000488155 SLC19A2O60779 497 aa10.54□□□□□ -0.72
NIPAL3-207ENST00000488155 LDB3O75112 727 aa10.54□□□□□ -0.72
NIPAL3-207ENST00000488155 ITGA10O75578 1167 aa10.54□□□□□ -0.72
NIPAL3-207ENST00000488155 SNRPB2P08579 225 aaKnown RBP10.54□□□□□ -0.72
NIPAL3-207ENST00000488155 LTA4HP09960 611 aaKnown RBP10.54□□□□□ -0.72
NIPAL3-207ENST00000488155 ESRRAP11474 423 aaPredicted RBP10.54□□□□□ -0.72
NIPAL3-207ENST00000488155 MEOX1P50221 254 aa10.54□□□□□ -0.72
NIPAL3-207ENST00000488155 HLCSP50747 726 aa10.54□□□□□ -0.72
NIPAL3-207ENST00000488155 MTTPP55157 894 aa10.54□□□□□ -0.72
NIPAL3-207ENST00000488155 CASP6P55212 293 aa10.54□□□□□ -0.72
NIPAL3-207ENST00000488155 HSD17B7P56937 341 aa10.54□□□□□ -0.72
NIPAL3-207ENST00000488155 GPR85P60893 370 aa10.54□□□□□ -0.72
NIPAL3-207ENST00000488155 STX4Q12846 297 aa10.54□□□□□ -0.72
NIPAL3-207ENST00000488155 ILF2Q12905 390 aaKnown RBP10.54□□□□□ -0.72
NIPAL3-207ENST00000488155 LAPTM5Q13571 262 aa10.54□□□□□ -0.72
NIPAL3-207ENST00000488155 ADPRMQ3LIE5 342 aa10.54□□□□□ -0.72
NIPAL3-207ENST00000488155 PAGE2BQ5JRK9 111 aa10.54□□□□□ -0.72
NIPAL3-207ENST00000488155 CDKL4Q5MAI5 379 aa10.54□□□□□ -0.72
NIPAL3-207ENST00000488155 C8orf74Q6P047 294 aa10.54□□□□□ -0.72
NIPAL3-207ENST00000488155 ZNF793Q6ZN11 406 aa10.54□□□□□ -0.72
NIPAL3-207ENST00000488155 LRRC70Q7Z2Q7 622 aa10.54□□□□□ -0.72
NIPAL3-207ENST00000488155 UBE3DQ7Z6J8 389 aa10.54□□□□□ -0.72
NIPAL3-207ENST00000488155 MYLK4Q86YV6 388 aaPredicted RBP10.54□□□□□ -0.72
NIPAL3-207ENST00000488155 SRRM1Q8IYB3 904 aaKnown RBP10.54□□□□□ -0.72
NIPAL3-207ENST00000488155 LGI4Q8N135 537 aa10.54□□□□□ -0.72
NIPAL3-207ENST00000488155 TMEM156Q8N614 296 aa10.54□□□□□ -0.72
NIPAL3-207ENST00000488155 ITLN2Q8WWU7 325 aaPredicted RBP10.54□□□□□ -0.72
NIPAL3-207ENST00000488155 TMEM125Q96AQ2 219 aa10.54□□□□□ -0.72
NIPAL3-207ENST00000488155 WDR34Q96EX3 536 aa10.54□□□□□ -0.72
NIPAL3-207ENST00000488155 VMP1Q96GC9 406 aa10.54□□□□□ -0.72
NIPAL3-207ENST00000488155 MAGED4Q96JG8 741 aa10.54□□□□□ -0.72
NIPAL3-207ENST00000488155 ATOH8Q96SQ7 321 aa10.54□□□□□ -0.72
NIPAL3-207ENST00000488155 MAPKAP1Q9BPZ7 522 aa10.54□□□□□ -0.72
NIPAL3-207ENST00000488155 CCDC77Q9BR77 488 aa10.54□□□□□ -0.72
NIPAL3-207ENST00000488155 EFCAB11Q9BUY7 163 aa10.54□□□□□ -0.72
NIPAL3-207ENST00000488155 SORBS1Q9BX66 1292 aaKnown RBP10.54□□□□□ -0.72
NIPAL3-207ENST00000488155 ALOXE3Q9BYJ1 711 aa10.54□□□□□ -0.72
NIPAL3-207ENST00000488155 PITHD1Q9GZP4 211 aaPredicted RBP10.54□□□□□ -0.72
NIPAL3-207ENST00000488155 EHD1Q9H4M9 534 aa10.54□□□□□ -0.72
NIPAL3-207ENST00000488155 NUDT4Q9NZJ9 180 aa10.54□□□□□ -0.72
NIPAL3-207ENST00000488155 OPTCQ9UBM4 332 aa10.54□□□□□ -0.72
NIPAL3-207ENST00000488155 K7EPI3 171 aa10.53□□□□□ -0.72
NIPAL3-207ENST00000488155 CYR61O00622 381 aa10.53□□□□□ -0.72
NIPAL3-207ENST00000488155 ASNA1O43681 348 aa10.53□□□□□ -0.72
NIPAL3-207ENST00000488155 NME2P1O60361 137 aa10.53□□□□□ -0.72
NIPAL3-207ENST00000488155 KERAO60938 352 aa10.53□□□□□ -0.72
NIPAL3-207ENST00000488155 URI1O94763 535 aaPredicted RBP10.53□□□□□ -0.72
NIPAL3-207ENST00000488155 C2P06681 752 aa10.53□□□□□ -0.72
NIPAL3-207ENST00000488155 ABOP16442 354 aa10.53□□□□□ -0.72
NIPAL3-207ENST00000488155 ZNF24P17028 368 aa10.53□□□□□ -0.72
NIPAL3-207ENST00000488155 TNNI3P19429 210 aa10.53□□□□□ -0.72
NIPAL3-207ENST00000488155 NME2P22392 152 aa10.53□□□□□ -0.72
NIPAL3-207ENST00000488155 ATP5A1P25705 553 aaKnown RBP10.53□□□□□ -0.72
NIPAL3-207ENST00000488155 GSTM2P28161 218 aa10.53□□□□□ -0.72
NIPAL3-207ENST00000488155 CRABP2P29373 138 aa10.53□□□□□ -0.72
NIPAL3-207ENST00000488155 GUCY2DQ02846 1103 aa10.53□□□□□ -0.72
NIPAL3-207ENST00000488155 TGM3Q08188 693 aa10.53□□□□□ -0.72
NIPAL3-207ENST00000488155 KRTCAP3Q53RY4 240 aa10.53□□□□□ -0.72
NIPAL3-207ENST00000488155 MED27Q6P2C8 311 aa10.53□□□□□ -0.72
NIPAL3-207ENST00000488155 C3P1Q6ZMU1 363 aa10.53□□□□□ -0.72
NIPAL3-207ENST00000488155 MDGA2Q7Z553 956 aa10.53□□□□□ -0.72
NIPAL3-207ENST00000488155 SPPL2CQ8IUH8 684 aa10.53□□□□□ -0.72
NIPAL3-207ENST00000488155 SULF2Q8IWU5 870 aa10.53□□□□□ -0.72
NIPAL3-207ENST00000488155 OR4N5Q8IXE1 308 aa10.53□□□□□ -0.72
NIPAL3-207ENST00000488155 ZNF595Q8IYB9 648 aa10.53□□□□□ -0.72
NIPAL3-207ENST00000488155 CENPLQ8N0S6 344 aaPredicted RBP10.53□□□□□ -0.72
NIPAL3-207ENST00000488155 CYP4Z2PQ8N1L4 340 aa10.53□□□□□ -0.72
NIPAL3-207ENST00000488155 TEX9Q8N6V9 391 aa10.53□□□□□ -0.72
NIPAL3-207ENST00000488155 ZNF321PQ8N8H1 164 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms