RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 B3GNT7Q8NFL0 401 aa10.71□□□□□ -0.69
SPEN-205ENST00000487496 HUS1BQ8NHY5 278 aa10.71□□□□□ -0.69
SPEN-205ENST00000487496 DCAKDQ8WVC6 231 aa10.71□□□□□ -0.69
SPEN-205ENST00000487496 CMTM7Q96FZ5 175 aa10.71□□□□□ -0.69
SPEN-205ENST00000487496 SIGLEC12Q96PQ1 595 aa10.71□□□□□ -0.69
SPEN-205ENST00000487496 CSF3RQ99062 836 aa10.71□□□□□ -0.69
SPEN-205ENST00000487496 UTP23Q9BRU9 249 aaKnown RBP10.71□□□□□ -0.69
SPEN-205ENST00000487496 TBCDQ9BTW9 1192 aa10.71□□□□□ -0.69
SPEN-205ENST00000487496 ROGDIQ9GZN7 287 aa10.71□□□□□ -0.69
SPEN-205ENST00000487496 ACTR8Q9H981 624 aa10.71□□□□□ -0.69
SPEN-205ENST00000487496 PRM3Q9NNZ6 103 aa10.71□□□□□ -0.69
SPEN-205ENST00000487496 PNO1Q9NRX1 252 aaKnown RBP10.71□□□□□ -0.69
SPEN-205ENST00000487496 KCMF1Q9P0J7 381 aa10.71□□□□□ -0.69
SPEN-205ENST00000487496 CPSF2Q9P2I0 782 aaKnown RBP10.71□□□□□ -0.69
SPEN-205ENST00000487496 ADGRE2Q9UHX3 823 aa10.71□□□□□ -0.69
SPEN-205ENST00000487496 ZNF180Q9UJW8 692 aa10.71□□□□□ -0.69
SPEN-205ENST00000487496 MRPS33Q9Y291 106 aaKnown RBP10.71□□□□□ -0.69
SPEN-205ENST00000487496 TSC22D4Q9Y3Q8 395 aa10.71□□□□□ -0.69
SPEN-205ENST00000487496 PRRC2CQ9Y520 2896 aaKnown RBP10.71□□□□□ -0.69
SPEN-205ENST00000487496 TNPO3Q9Y5L0 923 aaKnown RBP10.71□□□□□ -0.69
SPEN-205ENST00000487496 USP9YO00507 2555 aaPredicted RBP10.71□□□□□ -0.7
SPEN-205ENST00000487496 WIPF3A6NGB9 483 aa10.7□□□□□ -0.7
SPEN-205ENST00000487496 GABRR3A8MPY1 467 aa10.7□□□□□ -0.7
SPEN-205ENST00000487496 TRIM49D1C9J1S8 452 aa10.7□□□□□ -0.7
SPEN-205ENST00000487496 SAP18O00422 153 aaKnown RBP10.7□□□□□ -0.7
SPEN-205ENST00000487496 CTNSO60931 367 aa10.7□□□□□ -0.7
SPEN-205ENST00000487496 MYO1DO94832 1006 aa10.7□□□□□ -0.7
SPEN-205ENST00000487496 SCELO95171 688 aa10.7□□□□□ -0.7
SPEN-205ENST00000487496 COL6A2P12110 1019 aa10.7□□□□□ -0.7
SPEN-205ENST00000487496 GP1BBP13224 206 aa10.7□□□□□ -0.7
SPEN-205ENST00000487496 HIST1H1TP22492 207 aaPredicted RBP10.7□□□□□ -0.7
SPEN-205ENST00000487496 ATP5A1P25705 553 aaKnown RBP10.7□□□□□ -0.7
SPEN-205ENST00000487496 CNTFP26441 200 aa10.7□□□□□ -0.7
SPEN-205ENST00000487496 TPP2P29144 1249 aaPredicted RBP10.7□□□□□ -0.7
SPEN-205ENST00000487496 PPP2R1BP30154 601 aa10.7□□□□□ -0.7
SPEN-205ENST00000487496 PIK3CBP42338 1070 aa10.7□□□□□ -0.7
SPEN-205ENST00000487496 TDGF1P3P51864 188 aa10.7□□□□□ -0.7
SPEN-205ENST00000487496 MLF1P58340 268 aa10.7□□□□□ -0.7
SPEN-205ENST00000487496 OC90Q02509 493 aaPredicted RBP10.7□□□□□ -0.7
SPEN-205ENST00000487496 DDX39BQ13838 428 aaKnown RBP10.7□□□□□ -0.7
SPEN-205ENST00000487496 GTF2H2Q13888 395 aa10.7□□□□□ -0.7
SPEN-205ENST00000487496 OR1C1Q15619 314 aa10.7□□□□□ -0.7
SPEN-205ENST00000487496 AP5B1Q2VPB7 878 aa10.7□□□□□ -0.7
SPEN-205ENST00000487496 DEPDC1Q5TB30 811 aa10.7□□□□□ -0.7
SPEN-205ENST00000487496 ZNF468Q5VIY5 522 aaPredicted RBP10.7□□□□□ -0.7
SPEN-205ENST00000487496 KHDRBS2Q5VWX1 349 aaKnown RBP10.7□□□□□ -0.7
SPEN-205ENST00000487496 GTF2H2CQ6P1K8 395 aa10.7□□□□□ -0.7
SPEN-205ENST00000487496 METTL2BQ6P1Q9 378 aaKnown RBP10.7□□□□□ -0.7
SPEN-205ENST00000487496 TAOK1Q7L7X3 1001 aa10.7□□□□□ -0.7
SPEN-205ENST00000487496 GOLGA7Q7Z5G4 137 aa10.7□□□□□ -0.7
SPEN-205ENST00000487496 CLNKQ7Z7G1 428 aa10.7□□□□□ -0.7
SPEN-205ENST00000487496 MYLK4Q86YV6 388 aaPredicted RBP10.7□□□□□ -0.7
SPEN-205ENST00000487496 RNF175Q8N4F7 328 aa10.7□□□□□ -0.7
SPEN-205ENST00000487496 PTGR2Q8N8N7 351 aaPredicted RBP10.7□□□□□ -0.7
SPEN-205ENST00000487496 APCDD1LQ8NCL9 501 aa10.7□□□□□ -0.7
SPEN-205ENST00000487496 NR4A3Q92570 626 aa10.7□□□□□ -0.7
SPEN-205ENST00000487496 TRIM44Q96DX7 344 aaPredicted RBP10.7□□□□□ -0.7
SPEN-205ENST00000487496 MAPKAP1Q9BPZ7 522 aa10.7□□□□□ -0.7
SPEN-205ENST00000487496 HES7Q9BYE0 225 aa10.7□□□□□ -0.7
SPEN-205ENST00000487496 DEFB126Q9BYW3 111 aa10.7□□□□□ -0.7
SPEN-205ENST00000487496 OR51B5Q9H339 312 aa10.7□□□□□ -0.7
SPEN-205ENST00000487496 IPPKQ9H8X2 491 aa10.7□□□□□ -0.7
SPEN-205ENST00000487496 LYRM4Q9HD34 91 aa10.7□□□□□ -0.7
SPEN-205ENST00000487496 XPR1Q9UBH6 696 aa10.7□□□□□ -0.7
SPEN-205ENST00000487496 PPIEQ9UNP9 301 aaKnown RBP10.7□□□□□ -0.7
SPEN-205ENST00000487496 SLC5A6Q9Y289 635 aa10.7□□□□□ -0.7
SPEN-205ENST00000487496 PCDHGB6Q9Y5F9 930 aa10.7□□□□□ -0.7
SPEN-205ENST00000487496 EXOC1LA0A1B0GW35 172 aa10.69□□□□□ -0.7
SPEN-205ENST00000487496 H0YIV9 168 aa10.69□□□□□ -0.7
SPEN-205ENST00000487496 CDK2AP1O14519 115 aa10.69□□□□□ -0.7
SPEN-205ENST00000487496 UGDHO60701 494 aa10.69□□□□□ -0.7
SPEN-205ENST00000487496 NEURL1O76050 574 aa10.69□□□□□ -0.7
SPEN-205ENST00000487496 DDAH2O95865 285 aa10.69□□□□□ -0.7
SPEN-205ENST00000487496 CRYABP02511 175 aaKnown RBP10.69□□□□□ -0.7
SPEN-205ENST00000487496 ABHD2P08910 425 aa10.69□□□□□ -0.7
SPEN-205ENST00000487496 SNRPAP09012 282 aaKnown RBP10.69□□□□□ -0.7
SPEN-205ENST00000487496 RHOXF2BP0C7M4 288 aa10.69□□□□□ -0.7
SPEN-205ENST00000487496 CD46P15529 392 aa10.69□□□□□ -0.7
SPEN-205ENST00000487496 MST1P26927 711 aa10.69□□□□□ -0.7
SPEN-205ENST00000487496 EEF1DP29692 281 aaKnown RBP10.69□□□□□ -0.7
SPEN-205ENST00000487496 SSR2P43308 183 aa10.69□□□□□ -0.7
SPEN-205ENST00000487496 PIK3CGP48736 1102 aa10.69□□□□□ -0.7
SPEN-205ENST00000487496 CLCN2P51788 898 aa10.69□□□□□ -0.7
SPEN-205ENST00000487496 GPR143P51810 404 aa10.69□□□□□ -0.7
SPEN-205ENST00000487496 RPS13P62277 151 aaKnown RBP10.69□□□□□ -0.7
SPEN-205ENST00000487496 PMP22Q01453 160 aa10.69□□□□□ -0.7
SPEN-205ENST00000487496 SRSF11Q05519 484 aaKnown RBP10.69□□□□□ -0.7
SPEN-205ENST00000487496 CPSF6Q16630 551 aaKnown RBP eCLIP10.69□□□□□ -0.7
SPEN-205ENST00000487496 TSNAXIP1Q2TAA8 658 aa10.69□□□□□ -0.7
SPEN-205ENST00000487496 LGSNQ5TDP6 509 aa10.69□□□□□ -0.7
SPEN-205ENST00000487496 OR4C11Q6IEV9 310 aa10.69□□□□□ -0.7
SPEN-205ENST00000487496 TRMT10CQ7L0Y3 403 aaKnown RBP10.69□□□□□ -0.7
SPEN-205ENST00000487496 ARMC10Q8N2F6 343 aa10.69□□□□□ -0.7
SPEN-205ENST00000487496 L3MBTL4Q8NA19 623 aa10.69□□□□□ -0.7
SPEN-205ENST00000487496 DNAJB8Q8NHS0 232 aa10.69□□□□□ -0.7
SPEN-205ENST00000487496 PHF21BQ96EK2 531 aa10.69□□□□□ -0.7
SPEN-205ENST00000487496 SCMH1Q96GD3 660 aa10.69□□□□□ -0.7
SPEN-205ENST00000487496 SCYL1Q96KG9 808 aa10.69□□□□□ -0.7
SPEN-205ENST00000487496 C5orf34Q96MH7 638 aa10.69□□□□□ -0.7
SPEN-205ENST00000487496 MTERF1Q99551 399 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms