RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 TGFB1P01137 390 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 HOXD8P13378 290 aaPredicted RBP7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 RHCEP18577 417 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 HOXC13P31276 330 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 MAN2A2P49641 1150 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 SMSP52788 366 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 GINS1Q14691 196 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 LARS2Q15031 903 aaKnown RBP7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 RGNQ15493 299 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 NDUFAF6Q330K2 333 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 ZNF792Q3KQV3 632 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 CNIH2Q6PI25 160 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 KLHL36Q8N4N3 616 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 OR6C4Q8NGE1 309 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 MRPS31Q92665 395 aaKnown RBP7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 TRIB3Q96RU7 358 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 MGME1Q9BQP7 344 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 GKN1Q9NS71 199 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 ADAMTSL1Q8N6G6 1762 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 MID1O15344 667 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 MTX2O75431 263 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 KHDRBS3O75525 346 aaKnown RBP7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 ERAL1O75616 437 aaKnown RBP7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 NUDT7P0C024 238 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 CYP2A6P11509 494 aaPredicted RBP7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 DNASE1P24855 282 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 CXCR2P25025 360 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 HMGCLP35914 325 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 P2RX3P56373 397 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 KCNA10Q16322 511 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 ESCO2Q56NI9 601 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 FRMPD2BQ6IN97 320 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 FAM171BQ6P995 826 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 AGMOQ6ZNB7 445 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 THOC6Q86W42 341 aaKnown RBP7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 SLC30A8Q8IWU4 369 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 CHPFQ8IZ52 775 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 NXPE1Q8N323 547 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 ZFP41Q8N8Y5 198 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 RFT1Q96AA3 541 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 TESCQ96BS2 214 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 R3HDMLQ9H3Y0 253 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 BEX1Q9HBH7 125 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 TMEM138Q9NPI0 162 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 MN1Q10571 1320 aaPredicted RBP7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 RFPL3O75679 317 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 TOXO94900 526 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 ARHGEF15O94989 841 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 KCNK5O95279 499 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 IL1RNP18510 177 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 PKLRP30613 574 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 NTSP30990 170 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 RPS19P39019 145 aaKnown RBP7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 MLLT3P42568 568 aaPredicted RBP7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 AFF1P51825 1210 aaKnown RBP7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 MAZP56270 477 aaKnown RBP7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 GNA13Q14344 377 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 SIGIRRQ6IA17 410 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 REEP3Q6NUK4 255 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 TBC1D19Q8N5T2 526 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 DTX3Q8N9I9 347 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 C7orf57Q8NEG2 295 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 GATAD2BQ8WXI9 593 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 EXOSC8Q96B26 276 aaKnown RBP7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 LRR1Q96L50 414 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 NMNAT1Q9HAN9 279 aaPredicted RBP7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 TMEM30AQ9NV96 361 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 RGS17Q9UGC6 210 aaPredicted RBP7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 SRRDQ9UH36 339 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 PGAP2Q9UHJ9 254 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 ACSL6Q9UKU0 697 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 MAFFQ9ULX9 164 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 ENPP4Q9Y6X5 453 aa7.36□□□□□ -1.23
COL6A4P1-202ENST00000487147 LOC102723532A0A0G2JNH3 316 aa7.35□□□□□ -1.23
COL6A4P1-202ENST00000487147 HHLA1C9JL84 531 aa7.35□□□□□ -1.23
COL6A4P1-202ENST00000487147 NFKBIEO00221 500 aa7.35□□□□□ -1.23
COL6A4P1-202ENST00000487147 SLC19A1P41440 591 aa7.35□□□□□ -1.23
COL6A4P1-202ENST00000487147 GMFBP60983 142 aa7.35□□□□□ -1.23
COL6A4P1-202ENST00000487147 PRSS36Q5K4E3 855 aa7.35□□□□□ -1.23
COL6A4P1-202ENST00000487147 BCL2L15Q5TBC7 163 aa7.35□□□□□ -1.23
COL6A4P1-202ENST00000487147 NXNL2Q5VZ03 156 aa7.35□□□□□ -1.23
COL6A4P1-202ENST00000487147 RGMBQ6NW40 437 aa7.35□□□□□ -1.23
COL6A4P1-202ENST00000487147 DGLUCYQ7Z3D6 616 aa7.35□□□□□ -1.23
COL6A4P1-202ENST00000487147 LHFPL3Q86UP9 236 aa7.35□□□□□ -1.23
COL6A4P1-202ENST00000487147 ZNF614Q8N883 585 aa7.35□□□□□ -1.23
COL6A4P1-202ENST00000487147 PIGKQ92643 395 aa7.35□□□□□ -1.23
COL6A4P1-202ENST00000487147 USP7Q93009 1102 aa7.35□□□□□ -1.23
COL6A4P1-202ENST00000487147 C1QTNF3Q9BXJ4 246 aa7.35□□□□□ -1.23
COL6A4P1-202ENST00000487147 HDHD5Q9BXW7 423 aa7.35□□□□□ -1.23
COL6A4P1-202ENST00000487147 ALOXE3Q9BYJ1 711 aa7.35□□□□□ -1.23
COL6A4P1-202ENST00000487147 GABARAPL1Q9H0R8 117 aa7.35□□□□□ -1.23
COL6A4P1-202ENST00000487147 AKAP7Q9P0M2 348 aaPredicted RBP7.35□□□□□ -1.23
COL6A4P1-202ENST00000487147 NFKBIL1Q9UBC1 381 aaPredicted RBP7.35□□□□□ -1.23
COL6A4P1-202ENST00000487147 ALG5Q9Y673 324 aa7.35□□□□□ -1.23
COL6A4P1-202ENST00000487147 WNK3Q9BYP7 1800 aa7.35□□□□□ -1.23
COL6A4P1-202ENST00000487147 TRIM3O75382 744 aaPredicted RBP7.35□□□□□ -1.23
COL6A4P1-202ENST00000487147 OR5F1O95221 314 aa7.35□□□□□ -1.23
COL6A4P1-202ENST00000487147 ADAP00813 363 aa7.35□□□□□ -1.23
COL6A4P1-202ENST00000487147 FGBP02675 491 aa7.35□□□□□ -1.23
COL6A4P1-202ENST00000487147 SRPRAP08240 638 aaKnown RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms