RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 CLCN7P51798 805 aa7.06□□□□□ -1.28
PDPN-205ENST00000487038 ZNF136P52737 540 aa7.06□□□□□ -1.28
PDPN-205ENST00000487038 HK2P52789 917 aa7.06□□□□□ -1.28
PDPN-205ENST00000487038 NAP1L1P55209 391 aaKnown RBP7.06□□□□□ -1.28
PDPN-205ENST00000487038 HSD17B7P56937 341 aa7.06□□□□□ -1.28
PDPN-205ENST00000487038 DMTNQ08495 405 aa7.06□□□□□ -1.28
PDPN-205ENST00000487038 SLC13A2Q13183 592 aa7.06□□□□□ -1.28
PDPN-205ENST00000487038 SP140Q13342 867 aa7.06□□□□□ -1.28
PDPN-205ENST00000487038 CUL1Q13616 776 aa7.06□□□□□ -1.28
PDPN-205ENST00000487038 ELAVL1Q15717 326 aaKnown RBP7.06□□□□□ -1.28
PDPN-205ENST00000487038 ZNF750Q32MQ0 723 aa7.06□□□□□ -1.28
PDPN-205ENST00000487038 AADACL2Q6P093 401 aa7.06□□□□□ -1.28
PDPN-205ENST00000487038 C20orf204Q6ZNR8 217 aa7.06□□□□□ -1.28
PDPN-205ENST00000487038 SEM1Q6ZVN7 128 aa7.06□□□□□ -1.28
PDPN-205ENST00000487038 STRA8Q7Z7C7 330 aa7.06□□□□□ -1.28
PDPN-205ENST00000487038 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.06□□□□□ -1.28
PDPN-205ENST00000487038 CA13Q8N1Q1 262 aa7.06□□□□□ -1.28
PDPN-205ENST00000487038 UBL4BQ8N7F7 174 aa7.06□□□□□ -1.28
PDPN-205ENST00000487038 TRPV3Q8NET8 790 aa7.06□□□□□ -1.28
PDPN-205ENST00000487038 OR5L2Q8NGL0 311 aa7.06□□□□□ -1.28
PDPN-205ENST00000487038 OR8K3Q8NH51 312 aa7.06□□□□□ -1.28
PDPN-205ENST00000487038 OR14A16Q8NHC5 309 aa7.06□□□□□ -1.28
PDPN-205ENST00000487038 NEIL3Q8TAT5 605 aa7.06□□□□□ -1.28
PDPN-205ENST00000487038 SLC35B2Q8TB61 432 aa7.06□□□□□ -1.28
PDPN-205ENST00000487038 UTP15Q8TED0 518 aaKnown RBP7.06□□□□□ -1.28
PDPN-205ENST00000487038 ASB11Q8WXH4 323 aa7.06□□□□□ -1.28
PDPN-205ENST00000487038 KCNJ9Q92806 393 aa7.06□□□□□ -1.28
PDPN-205ENST00000487038 DAZLQ92904 295 aaKnown RBP7.06□□□□□ -1.28
PDPN-205ENST00000487038 ALKBH8Q96BT7 664 aaKnown RBP7.06□□□□□ -1.28
PDPN-205ENST00000487038 NTNG2Q96CW9 530 aa7.06□□□□□ -1.28
PDPN-205ENST00000487038 FAR2Q96K12 515 aa7.06□□□□□ -1.28
PDPN-205ENST00000487038 RBM24Q9BX46 236 aaKnown RBP7.06□□□□□ -1.28
PDPN-205ENST00000487038 ACKR4Q9NPB9 350 aa7.06□□□□□ -1.28
PDPN-205ENST00000487038 PRTFDC1Q9NRG1 225 aa7.06□□□□□ -1.28
PDPN-205ENST00000487038 RAB6BQ9NRW1 208 aa7.06□□□□□ -1.28
PDPN-205ENST00000487038 BFARQ9NZS9 450 aa7.06□□□□□ -1.28
PDPN-205ENST00000487038 KLHL42Q9P2K6 505 aa7.06□□□□□ -1.28
PDPN-205ENST00000487038 ZNF148Q9UQR1 794 aa7.06□□□□□ -1.28
PDPN-205ENST00000487038 EXPH5Q8NEV8 1989 aa7.06□□□□□ -1.28
PDPN-205ENST00000487038 HEATR5AQ86XA9 2040 aa7.05□□□□□ -1.28
PDPN-205ENST00000487038 CTAGE9A4FU28 777 aa7.05□□□□□ -1.28
PDPN-205ENST00000487038 NRDCO43847 1150 aa7.05□□□□□ -1.28
PDPN-205ENST00000487038 VAPBO95292 243 aa7.05□□□□□ -1.28
PDPN-205ENST00000487038 CNOT4O95628 575 aaKnown RBP7.05□□□□□ -1.28
PDPN-205ENST00000487038 IL18BPO95998 194 aa7.05□□□□□ -1.28
PDPN-205ENST00000487038 TP53P04637 393 aaPredicted RBP7.05□□□□□ -1.28
PDPN-205ENST00000487038 IFNA16P05015 189 aa7.05□□□□□ -1.28
PDPN-205ENST00000487038 C8GP07360 202 aa7.05□□□□□ -1.28
PDPN-205ENST00000487038 HIST1H2AGP0C0S8 130 aaPredicted RBP7.05□□□□□ -1.28
PDPN-205ENST00000487038 CCL3P10147 92 aa7.05□□□□□ -1.28
PDPN-205ENST00000487038 HIST1H2ADP20671 130 aa7.05□□□□□ -1.28
PDPN-205ENST00000487038 CTSSP25774 331 aa7.05□□□□□ -1.28
PDPN-205ENST00000487038 GDF1P27539 372 aa7.05□□□□□ -1.28
PDPN-205ENST00000487038 NMBRP28336 390 aa7.05□□□□□ -1.28
PDPN-205ENST00000487038 NPY2RP49146 381 aa7.05□□□□□ -1.28
PDPN-205ENST00000487038 RGS4P49798 205 aa7.05□□□□□ -1.28
PDPN-205ENST00000487038 SESN2P58004 480 aaPredicted RBP7.05□□□□□ -1.28
PDPN-205ENST00000487038 RAB8AP61006 207 aa7.05□□□□□ -1.28
PDPN-205ENST00000487038 CCZ1BP86790 482 aa7.05□□□□□ -1.28
PDPN-205ENST00000487038 CCZ1P86791 482 aaPredicted RBP7.05□□□□□ -1.28
PDPN-205ENST00000487038 FOXO1Q12778 655 aa7.05□□□□□ -1.28
PDPN-205ENST00000487038 RCAN2Q14206 197 aa7.05□□□□□ -1.28
PDPN-205ENST00000487038 SPA17Q15506 151 aa7.05□□□□□ -1.28
PDPN-205ENST00000487038 XKR6Q5GH73 641 aa7.05□□□□□ -1.28
PDPN-205ENST00000487038 SLC22A10Q63ZE4 541 aa7.05□□□□□ -1.28
PDPN-205ENST00000487038 NSUN5P2Q63ZY6 315 aa7.05□□□□□ -1.28
PDPN-205ENST00000487038 AGTRAPQ6RW13 159 aa7.05□□□□□ -1.28
PDPN-205ENST00000487038 SCUBE1Q8IWY4 988 aa7.05□□□□□ -1.28
PDPN-205ENST00000487038 DND1Q8IYX4 353 aaKnown RBP7.05□□□□□ -1.28
PDPN-205ENST00000487038 CCDC89Q8N998 374 aa7.05□□□□□ -1.28
PDPN-205ENST00000487038 TC2NQ8N9U0 490 aa7.05□□□□□ -1.28
PDPN-205ENST00000487038 MORN4Q8NDC4 146 aa7.05□□□□□ -1.28
PDPN-205ENST00000487038 ABHD11Q8NFV4 315 aa7.05□□□□□ -1.28
PDPN-205ENST00000487038 SLC22A8Q8TCC7 542 aa7.05□□□□□ -1.28
PDPN-205ENST00000487038 HIST1H2AHQ96KK5 128 aa7.05□□□□□ -1.28
PDPN-205ENST00000487038 CAPZA3Q96KX2 299 aa7.05□□□□□ -1.28
PDPN-205ENST00000487038 TRIB1Q96RU8 372 aa7.05□□□□□ -1.28
PDPN-205ENST00000487038 SLC30A3Q99726 388 aa7.05□□□□□ -1.28
PDPN-205ENST00000487038 HIST1H2AJQ99878 128 aa7.05□□□□□ -1.28
PDPN-205ENST00000487038 H2AFJQ9BTM1 129 aa7.05□□□□□ -1.28
PDPN-205ENST00000487038 PRDM14Q9GZV8 571 aa7.05□□□□□ -1.28
PDPN-205ENST00000487038 RBSNQ9H1K0 784 aa7.05□□□□□ -1.28
PDPN-205ENST00000487038 SLC6A15Q9H2J7 730 aa7.05□□□□□ -1.28
PDPN-205ENST00000487038 LIN28AQ9H9Z2 209 aaKnown RBP7.05□□□□□ -1.28
PDPN-205ENST00000487038 UBTD1Q9HAC8 227 aa7.05□□□□□ -1.28
PDPN-205ENST00000487038 ZFP64Q9NPA5 681 aa7.05□□□□□ -1.28
PDPN-205ENST00000487038 EIF2B3Q9NR50 452 aaKnown RBP7.05□□□□□ -1.28
PDPN-205ENST00000487038 RYDENQ9NUL5 291 aaKnown RBP7.05□□□□□ -1.28
PDPN-205ENST00000487038 JKAMPQ9P055 326 aa7.05□□□□□ -1.28
PDPN-205ENST00000487038 PAK5Q9P286 719 aa7.05□□□□□ -1.28
PDPN-205ENST00000487038 GALPQ9UBC7 116 aa7.05□□□□□ -1.28
PDPN-205ENST00000487038 COPS7AQ9UBW8 275 aa7.05□□□□□ -1.28
PDPN-205ENST00000487038 SH2B3Q9UQQ2 575 aa7.05□□□□□ -1.28
PDPN-205ENST00000487038 COMMD10Q9Y6G5 202 aa7.05□□□□□ -1.28
PDPN-205ENST00000487038 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.05□□□□□ -1.28
PDPN-205ENST00000487038 A0A1W2PPR1 153 aa7.04□□□□□ -1.28
PDPN-205ENST00000487038 MBD3L4A6NDZ8 208 aaPredicted RBP7.04□□□□□ -1.28
PDPN-205ENST00000487038 MBD3L3A6NE82 208 aaPredicted RBP7.04□□□□□ -1.28
PDPN-205ENST00000487038 MBD3L5A6NJ08 208 aaPredicted RBP7.04□□□□□ -1.28
PDPN-205ENST00000487038 CD8B2A6NJW9 211 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms