RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 ZHX1-C8orf76Q96EF9 292 aa11.77□□□□□ -0.53
PTCD2-204ENST00000486995 PAWRQ96IZ0 340 aaKnown RBP11.77□□□□□ -0.53
PTCD2-204ENST00000486995 FAM129BQ96TA1 746 aa11.77□□□□□ -0.53
PTCD2-204ENST00000486995 NEURL2Q9BR09 285 aa11.77□□□□□ -0.53
PTCD2-204ENST00000486995 CXorf36Q9H7Y0 433 aa11.77□□□□□ -0.53
PTCD2-204ENST00000486995 GPR83Q9NYM4 423 aa11.77□□□□□ -0.53
PTCD2-204ENST00000486995 CXXC1Q9P0U4 656 aaPredicted RBP11.77□□□□□ -0.53
PTCD2-204ENST00000486995 DAPK2Q9UIK4 370 aa11.77□□□□□ -0.53
PTCD2-204ENST00000486995 RAB23Q9ULC3 237 aa11.77□□□□□ -0.53
PTCD2-204ENST00000486995 SLC6A14Q9UN76 642 aa11.77□□□□□ -0.53
PTCD2-204ENST00000486995 TMEM98Q9Y2Y6 226 aa11.77□□□□□ -0.53
PTCD2-204ENST00000486995 POU2F1P14859 743 aa11.76□□□□□ -0.53
PTCD2-204ENST00000486995 PORP16435 677 aaPredicted RBP11.76□□□□□ -0.53
PTCD2-204ENST00000486995 UQCRC2P22695 453 aa11.76□□□□□ -0.53
PTCD2-204ENST00000486995 CTNNB1P35222 781 aa11.76□□□□□ -0.53
PTCD2-204ENST00000486995 DUSP7Q16829 419 aa11.76□□□□□ -0.53
PTCD2-204ENST00000486995 FNDC3BQ53EP0 1204 aaKnown RBP11.76□□□□□ -0.53
PTCD2-204ENST00000486995 PAGE2Q7Z2X7 111 aa11.76□□□□□ -0.53
PTCD2-204ENST00000486995 ADGRF3Q8IZF5 1079 aa11.76□□□□□ -0.53
PTCD2-204ENST00000486995 DENND6BQ8NEG7 585 aa11.76□□□□□ -0.53
PTCD2-204ENST00000486995 UTP15Q8TED0 518 aaKnown RBP11.76□□□□□ -0.53
PTCD2-204ENST00000486995 OR8D1Q8WZ84 308 aa11.76□□□□□ -0.53
PTCD2-204ENST00000486995 ACAT2Q9BWD1 397 aa11.76□□□□□ -0.53
PTCD2-204ENST00000486995 ZNF717Q9BY31 904 aaPredicted RBP11.76□□□□□ -0.53
PTCD2-204ENST00000486995 IL23AQ9NPF7 189 aa11.76□□□□□ -0.53
PTCD2-204ENST00000486995 MIEF1Q9NQG6 463 aa11.76□□□□□ -0.53
PTCD2-204ENST00000486995 PRDM8Q9NQV8 689 aa11.76□□□□□ -0.53
PTCD2-204ENST00000486995 CHCHD3Q9NX63 227 aaKnown RBP11.76□□□□□ -0.53
PTCD2-204ENST00000486995 HCN4Q9Y3Q4 1203 aa11.76□□□□□ -0.53
PTCD2-204ENST00000486995 CHD7Q9P2D1 2997 aa11.76□□□□□ -0.53
PTCD2-204ENST00000486995 TRBC2A0A5B9 178 aa11.76□□□□□ -0.53
PTCD2-204ENST00000486995 TMEM247A6NEH6 219 aa11.76□□□□□ -0.53
PTCD2-204ENST00000486995 PLPP1O14494 284 aa11.76□□□□□ -0.53
PTCD2-204ENST00000486995 ADH1CP00326 375 aa11.76□□□□□ -0.53
PTCD2-204ENST00000486995 STSP08842 583 aa11.76□□□□□ -0.53
PTCD2-204ENST00000486995 HNRNPA1P09651 372 aaKnown RBP eCLIP11.76□□□□□ -0.53
PTCD2-204ENST00000486995 CDH3P22223 829 aa11.76□□□□□ -0.53
PTCD2-204ENST00000486995 VIPR2P41587 438 aa11.76□□□□□ -0.53
PTCD2-204ENST00000486995 TEKQ02763 1124 aa11.76□□□□□ -0.53
PTCD2-204ENST00000486995 GANABQ14697 944 aaKnown RBP11.76□□□□□ -0.53
PTCD2-204ENST00000486995 TIGD6Q17RP2 521 aa11.76□□□□□ -0.53
PTCD2-204ENST00000486995 PLD3Q8IV08 490 aa11.76□□□□□ -0.53
PTCD2-204ENST00000486995 SFTPA1Q8IWL2 248 aa11.76□□□□□ -0.53
PTCD2-204ENST00000486995 PLA2G15Q8NCC3 412 aa11.76□□□□□ -0.53
PTCD2-204ENST00000486995 RAD51AP1Q96B01 352 aa11.76□□□□□ -0.53
PTCD2-204ENST00000486995 PSD2Q9BQI7 771 aa11.76□□□□□ -0.53
PTCD2-204ENST00000486995 DCSTAMPQ9H295 470 aa11.76□□□□□ -0.53
PTCD2-204ENST00000486995 ZBTB20Q9HC78 741 aaPredicted RBP11.76□□□□□ -0.53
PTCD2-204ENST00000486995 SLAMF7Q9NQ25 335 aa11.76□□□□□ -0.53
PTCD2-204ENST00000486995 ANGPT4Q9Y264 503 aa11.76□□□□□ -0.53
PTCD2-204ENST00000486995 MRPS23Q9Y3D9 190 aaKnown RBP11.76□□□□□ -0.53
PTCD2-204ENST00000486995 ENPP4Q9Y6X5 453 aa11.76□□□□□ -0.53
PTCD2-204ENST00000486995 EDDM13A0A1B0GTR0 161 aa11.75□□□□□ -0.53
PTCD2-204ENST00000486995 OTOL1A6NHN0 477 aaPredicted RBP11.75□□□□□ -0.53
PTCD2-204ENST00000486995 M0R129 80 aa11.75□□□□□ -0.53
PTCD2-204ENST00000486995 VEGFDO43915 354 aa11.75□□□□□ -0.53
PTCD2-204ENST00000486995 AIREO43918 545 aa11.75□□□□□ -0.53
PTCD2-204ENST00000486995 CBLP22681 906 aa11.75□□□□□ -0.53
PTCD2-204ENST00000486995 UGT2B10P36537 528 aa11.75□□□□□ -0.53
PTCD2-204ENST00000486995 DSTNP60981 165 aa11.75□□□□□ -0.53
PTCD2-204ENST00000486995 CAMK1Q14012 370 aa11.75□□□□□ -0.53
PTCD2-204ENST00000486995 PUM1Q14671 1186 aaKnown RBP eCLIP11.75□□□□□ -0.53
PTCD2-204ENST00000486995 KRT78Q8N1N4 520 aa11.75□□□□□ -0.53
PTCD2-204ENST00000486995 DEPDC4Q8N2C3 294 aa11.75□□□□□ -0.53
PTCD2-204ENST00000486995 GTPBP3Q969Y2 492 aaKnown RBP11.75□□□□□ -0.53
PTCD2-204ENST00000486995 ZNF707Q96C28 371 aaPredicted RBP11.75□□□□□ -0.53
PTCD2-204ENST00000486995 PDXPQ96GD0 296 aa11.75□□□□□ -0.53
PTCD2-204ENST00000486995 ZFYVE19Q96K21 471 aa11.75□□□□□ -0.53
PTCD2-204ENST00000486995 RAD9AQ99638 391 aa11.75□□□□□ -0.53
PTCD2-204ENST00000486995 RSPO3Q9BXY4 272 aaPredicted RBP11.75□□□□□ -0.53
PTCD2-204ENST00000486995 ZNF556Q9HAH1 456 aa11.75□□□□□ -0.53
PTCD2-204ENST00000486995 RHCGQ9UBD6 479 aa11.75□□□□□ -0.53
PTCD2-204ENST00000486995 SLC23A2Q9UGH3 650 aa11.75□□□□□ -0.53
PTCD2-204ENST00000486995 SNX8Q9Y5X2 465 aa11.75□□□□□ -0.53
PTCD2-204ENST00000486995 KRBA1A5PL33 1030 aa11.75□□□□□ -0.53
PTCD2-204ENST00000486995 RTCAO00442 366 aaKnown RBP11.75□□□□□ -0.53
PTCD2-204ENST00000486995 FFAR1O14842 300 aa11.75□□□□□ -0.53
PTCD2-204ENST00000486995 CCNB2O95067 398 aa11.75□□□□□ -0.53
PTCD2-204ENST00000486995 GADD45GO95257 159 aa11.75□□□□□ -0.53
PTCD2-204ENST00000486995 GASTP01350 101 aa11.75□□□□□ -0.53
PTCD2-204ENST00000486995 RHCEP18577 417 aa11.75□□□□□ -0.53
PTCD2-204ENST00000486995 DDCP20711 480 aa11.75□□□□□ -0.53
PTCD2-204ENST00000486995 KELP23276 732 aa11.75□□□□□ -0.53
PTCD2-204ENST00000486995 GADD45AP24522 165 aa11.75□□□□□ -0.53
PTCD2-204ENST00000486995 CLK1P49759 484 aaKnown RBP11.75□□□□□ -0.53
PTCD2-204ENST00000486995 ELAVL3Q14576 367 aaKnown RBP11.75□□□□□ -0.53
PTCD2-204ENST00000486995 PTGES3Q15185 160 aaKnown RBP11.75□□□□□ -0.53
PTCD2-204ENST00000486995 GAB4Q2WGN9 574 aa11.75□□□□□ -0.53
PTCD2-204ENST00000486995 TMEM52BQ4KMG9 183 aa11.75□□□□□ -0.53
PTCD2-204ENST00000486995 DEPDC1Q5TB30 811 aa11.75□□□□□ -0.53
PTCD2-204ENST00000486995 REEP3Q6NUK4 255 aa11.75□□□□□ -0.53
PTCD2-204ENST00000486995 ERN2Q76MJ5 926 aaKnown RBP11.75□□□□□ -0.53
PTCD2-204ENST00000486995 SLC46A3Q7Z3Q1 461 aa11.75□□□□□ -0.53
PTCD2-204ENST00000486995 PDZD3Q86UT5 571 aa11.75□□□□□ -0.53
PTCD2-204ENST00000486995 PIAS4Q8N2W9 510 aaPredicted RBP11.75□□□□□ -0.53
PTCD2-204ENST00000486995 KIAA1958Q8N8K9 716 aa11.75□□□□□ -0.53
PTCD2-204ENST00000486995 ANKRD53Q8N9V6 530 aa11.75□□□□□ -0.53
PTCD2-204ENST00000486995 ZNF675Q8TD23 568 aa11.75□□□□□ -0.53
PTCD2-204ENST00000486995 APOBEC4Q8WW27 367 aaKnown RBP11.75□□□□□ -0.53
PTCD2-204ENST00000486995 TM4SF18Q96CE8 201 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms