RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 TMEM64Q6YI46 380 aa11.05□□□□□ -0.64
PRKCB-207ENST00000486868 CCDC80Q76M96 950 aa11.05□□□□□ -0.64
PRKCB-207ENST00000486868 EIF3MQ7L2H7 374 aaKnown RBP11.05□□□□□ -0.64
PRKCB-207ENST00000486868 SPRED1Q7Z699 444 aa11.05□□□□□ -0.64
PRKCB-207ENST00000486868 WDR5BQ86VZ2 330 aa11.05□□□□□ -0.64
PRKCB-207ENST00000486868 CARFQ8N187 725 aa11.05□□□□□ -0.64
PRKCB-207ENST00000486868 METTL25Q8N6Q8 603 aa11.05□□□□□ -0.64
PRKCB-207ENST00000486868 C11orf65Q8NCR3 313 aa11.05□□□□□ -0.64
PRKCB-207ENST00000486868 MOAP1Q96BY2 351 aa11.05□□□□□ -0.64
PRKCB-207ENST00000486868 NEURL3Q96EH8 262 aa11.05□□□□□ -0.64
PRKCB-207ENST00000486868 PYURFQ96I23 114 aa11.05□□□□□ -0.64
PRKCB-207ENST00000486868 ZNF597Q96LX8 424 aa11.05□□□□□ -0.64
PRKCB-207ENST00000486868 HSPA12BQ96MM6 686 aa11.05□□□□□ -0.64
PRKCB-207ENST00000486868 SERINC2Q96SA4 455 aa11.05□□□□□ -0.64
PRKCB-207ENST00000486868 DPH2Q9BQC3 489 aaPredicted RBP11.05□□□□□ -0.64
PRKCB-207ENST00000486868 SLC35A5Q9BS91 424 aa11.05□□□□□ -0.64
PRKCB-207ENST00000486868 SORBS1Q9BX66 1292 aaKnown RBP11.05□□□□□ -0.64
PRKCB-207ENST00000486868 OSBPL10Q9BXB5 764 aa11.05□□□□□ -0.64
PRKCB-207ENST00000486868 NLNQ9BYT8 704 aa11.05□□□□□ -0.64
PRKCB-207ENST00000486868 SEMA6CQ9H3T2 930 aa11.05□□□□□ -0.64
PRKCB-207ENST00000486868 EPB41L1Q9H4G0 881 aa11.05□□□□□ -0.64
PRKCB-207ENST00000486868 KLHL31Q9H511 634 aa11.05□□□□□ -0.64
PRKCB-207ENST00000486868 PIF1Q9H611 641 aa11.05□□□□□ -0.64
PRKCB-207ENST00000486868 BATF3Q9NR55 127 aa11.05□□□□□ -0.64
PRKCB-207ENST00000486868 C1GALT1Q9NS00 363 aa11.05□□□□□ -0.64
PRKCB-207ENST00000486868 MS4A12Q9NXJ0 267 aa11.05□□□□□ -0.64
PRKCB-207ENST00000486868 EPHA6Q9UF33 1036 aa11.05□□□□□ -0.64
PRKCB-207ENST00000486868 PHF11Q9UIL8 331 aa11.05□□□□□ -0.64
PRKCB-207ENST00000486868 POMT2Q9UKY4 750 aa11.05□□□□□ -0.64
PRKCB-207ENST00000486868 PSME2Q9UL46 239 aa11.05□□□□□ -0.64
PRKCB-207ENST00000486868 USP22Q9UPT9 525 aa11.05□□□□□ -0.64
PRKCB-207ENST00000486868 TNRC18O15417 2968 aaPredicted RBP11.05□□□□□ -0.64
PRKCB-207ENST00000486868 LRP4O75096 1905 aa11.04□□□□□ -0.64
PRKCB-207ENST00000486868 GSAPA4D1B5 854 aa11.04□□□□□ -0.64
PRKCB-207ENST00000486868 MYO1GB0I1T2 1018 aa11.04□□□□□ -0.64
PRKCB-207ENST00000486868 STK25O00506 426 aa11.04□□□□□ -0.64
PRKCB-207ENST00000486868 CLOCKO15516 846 aa11.04□□□□□ -0.64
PRKCB-207ENST00000486868 AQP9O43315 295 aa11.04□□□□□ -0.64
PRKCB-207ENST00000486868 SERPIND1P05546 499 aa11.04□□□□□ -0.64
PRKCB-207ENST00000486868 CELA2BP08218 269 aaPredicted RBP11.04□□□□□ -0.64
PRKCB-207ENST00000486868 IFI6P09912 130 aa11.04□□□□□ -0.64
PRKCB-207ENST00000486868 MAGP20916 626 aa11.04□□□□□ -0.64
PRKCB-207ENST00000486868 AFF3P51826 1226 aaKnown RBP11.04□□□□□ -0.64
PRKCB-207ENST00000486868 AQP4P55087 323 aa11.04□□□□□ -0.64
PRKCB-207ENST00000486868 MANFP55145 182 aaKnown RBP11.04□□□□□ -0.64
PRKCB-207ENST00000486868 ZXDAP98168 799 aa11.04□□□□□ -0.64
PRKCB-207ENST00000486868 SLAMF1Q13291 335 aa11.04□□□□□ -0.64
PRKCB-207ENST00000486868 SLC14A1Q13336 389 aa11.04□□□□□ -0.64
PRKCB-207ENST00000486868 GAB1Q13480 694 aa11.04□□□□□ -0.64
PRKCB-207ENST00000486868 ZNF542PQ5EBM4 170 aa11.04□□□□□ -0.64
PRKCB-207ENST00000486868 GCNT6Q5T4J0 391 aa11.04□□□□□ -0.64
PRKCB-207ENST00000486868 NDUFAF5Q5TEU4 345 aa11.04□□□□□ -0.64
PRKCB-207ENST00000486868 SAXO2Q658L1 398 aa11.04□□□□□ -0.64
PRKCB-207ENST00000486868 ZBTB49Q6ZSB9 765 aa11.04□□□□□ -0.64
PRKCB-207ENST00000486868 CBLL1Q75N03 491 aa11.04□□□□□ -0.64
PRKCB-207ENST00000486868 ABHD13Q7L211 337 aa11.04□□□□□ -0.64
PRKCB-207ENST00000486868 FAM20CQ8IXL6 584 aa11.04□□□□□ -0.64
PRKCB-207ENST00000486868 ARL14Q8N4G2 192 aa11.04□□□□□ -0.64
PRKCB-207ENST00000486868 SFXN5Q8TD22 340 aa11.04□□□□□ -0.64
PRKCB-207ENST00000486868 NETO1Q8TDF5 533 aa11.04□□□□□ -0.64
PRKCB-207ENST00000486868 UTP15Q8TED0 518 aaKnown RBP11.04□□□□□ -0.64
PRKCB-207ENST00000486868 CD180Q99467 661 aa11.04□□□□□ -0.64
PRKCB-207ENST00000486868 C17orf62Q9BQA9 187 aa11.04□□□□□ -0.64
PRKCB-207ENST00000486868 OSBPL11Q9BXB4 747 aa11.04□□□□□ -0.64
PRKCB-207ENST00000486868 NPLQ9BXD5 320 aaPredicted RBP11.04□□□□□ -0.64
PRKCB-207ENST00000486868 ASPSCR1Q9BZE9 553 aa11.04□□□□□ -0.64
PRKCB-207ENST00000486868 CLK4Q9HAZ1 481 aaKnown RBP11.04□□□□□ -0.64
PRKCB-207ENST00000486868 LYRM4Q9HD34 91 aa11.04□□□□□ -0.64
PRKCB-207ENST00000486868 SLC35C2Q9NQQ7 365 aa11.04□□□□□ -0.64
PRKCB-207ENST00000486868 ENAMQ9NRM1 1142 aa11.04□□□□□ -0.64
PRKCB-207ENST00000486868 DNAJB9Q9UBS3 223 aa11.04□□□□□ -0.64
PRKCB-207ENST00000486868 CES1P1Q9UKY3 287 aa11.04□□□□□ -0.64
PRKCB-207ENST00000486868 FAF1Q9UNN5 650 aaPredicted RBP11.04□□□□□ -0.64
PRKCB-207ENST00000486868 DOLKQ9UPQ8 538 aa11.04□□□□□ -0.64
PRKCB-207ENST00000486868 SLC22A7Q9Y694 548 aa11.04□□□□□ -0.64
PRKCB-207ENST00000486868 SLCO1B1Q9Y6L6 691 aa11.04□□□□□ -0.64
PRKCB-207ENST00000486868 BCAT2O15382 392 aaPredicted RBP11.03□□□□□ -0.64
PRKCB-207ENST00000486868 PROM1O43490 865 aa11.03□□□□□ -0.64
PRKCB-207ENST00000486868 NOBOXO60393 691 aa11.03□□□□□ -0.64
PRKCB-207ENST00000486868 SRPX2O60687 465 aaPredicted RBP11.03□□□□□ -0.64
PRKCB-207ENST00000486868 CTSVO60911 334 aa11.03□□□□□ -0.64
PRKCB-207ENST00000486868 IFNA14P01570 189 aa11.03□□□□□ -0.64
PRKCB-207ENST00000486868 ARAFP10398 606 aa11.03□□□□□ -0.64
PRKCB-207ENST00000486868 NTSP30990 170 aa11.03□□□□□ -0.64
PRKCB-207ENST00000486868 ANXA11P50995 505 aaKnown RBP11.03□□□□□ -0.64
PRKCB-207ENST00000486868 C21orf59P57076 290 aa11.03□□□□□ -0.64
PRKCB-207ENST00000486868 EEF1A2Q05639 463 aaKnown RBP11.03□□□□□ -0.64
PRKCB-207ENST00000486868 MED21Q13503 144 aa11.03□□□□□ -0.64
PRKCB-207ENST00000486868 C1orf61Q13536 156 aa11.03□□□□□ -0.64
PRKCB-207ENST00000486868 PRSS53Q2L4Q9 553 aa11.03□□□□□ -0.64
PRKCB-207ENST00000486868 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.03□□□□□ -0.64
PRKCB-207ENST00000486868 ZC3H12BQ5HYM0 836 aaKnown RBP11.03□□□□□ -0.64
PRKCB-207ENST00000486868 SLC48A1Q6P1K1 146 aa11.03□□□□□ -0.64
PRKCB-207ENST00000486868 BHLHB9Q6PI77 547 aa11.03□□□□□ -0.64
PRKCB-207ENST00000486868 PIWIL3Q7Z3Z3 882 aaKnown RBP11.03□□□□□ -0.64
PRKCB-207ENST00000486868 AMIGO2Q86SJ2 522 aa11.03□□□□□ -0.64
PRKCB-207ENST00000486868 C10orf111Q8N326 155 aa11.03□□□□□ -0.64
PRKCB-207ENST00000486868 SVOPLQ8N434 492 aa11.03□□□□□ -0.64
PRKCB-207ENST00000486868 MARVELD2Q8N4S9 558 aa11.03□□□□□ -0.64
PRKCB-207ENST00000486868 OR10G6Q8NH81 332 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms