RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 MIER3Q7Z3K6 550 aa3.92□□□□□ -1.78
SMC4-218ENST00000486711 KRTAP7-1Q8IUC3 87 aa3.92□□□□□ -1.78
SMC4-218ENST00000486711 SIDT2Q8NBJ9 832 aaKnown RBP3.92□□□□□ -1.78
SMC4-218ENST00000486711 TRPV3Q8NET8 790 aa3.92□□□□□ -1.78
SMC4-218ENST00000486711 OR2T6Q8NHC8 308 aa3.92□□□□□ -1.78
SMC4-218ENST00000486711 SMPDL3AQ92484 453 aa3.92□□□□□ -1.78
SMC4-218ENST00000486711 LITAFQ99732 161 aa3.92□□□□□ -1.78
SMC4-218ENST00000486711 ASCL2Q99929 193 aa3.92□□□□□ -1.78
SMC4-218ENST00000486711 DDX47Q9H0S4 455 aaKnown RBP3.92□□□□□ -1.78
SMC4-218ENST00000486711 ABCG4Q9H172 646 aa3.92□□□□□ -1.78
SMC4-218ENST00000486711 MED20Q9H944 212 aa3.92□□□□□ -1.78
SMC4-218ENST00000486711 UBE2TQ9NPD8 197 aaPredicted RBP3.92□□□□□ -1.78
SMC4-218ENST00000486711 B3GAT2Q9NPZ5 323 aa3.92□□□□□ -1.78
SMC4-218ENST00000486711 FETUBQ9UGM5 382 aa3.92□□□□□ -1.78
SMC4-218ENST00000486711 PSORS1C1Q9UIG5 152 aa3.92□□□□□ -1.78
SMC4-218ENST00000486711 TRMT6Q9UJA5 497 aaKnown RBP3.92□□□□□ -1.78
SMC4-218ENST00000486711 PILRAQ9UKJ1 303 aa3.92□□□□□ -1.78
SMC4-218ENST00000486711 SH3GLB1Q9Y371 365 aa3.92□□□□□ -1.78
SMC4-218ENST00000486711 ZHX2Q9Y6X8 837 aa3.92□□□□□ -1.78
SMC4-218ENST00000486711 MYH14Q7Z406 1995 aaKnown RBP3.92□□□□□ -1.78
SMC4-218ENST00000486711 UMODL1Q5DID0 1318 aa3.92□□□□□ -1.78
SMC4-218ENST00000486711 BICDL2A1A5D9 508 aa3.91□□□□□ -1.78
SMC4-218ENST00000486711 SLC9B1P1A6NJY1 282 aa3.91□□□□□ -1.78
SMC4-218ENST00000486711 NR5A2O00482 541 aa3.91□□□□□ -1.78
SMC4-218ENST00000486711 OGTO15294 1046 aa3.91□□□□□ -1.78
SMC4-218ENST00000486711 ECE2O60344 883 aa3.91□□□□□ -1.78
SMC4-218ENST00000486711 MTRF1O75570 445 aaKnown RBP3.91□□□□□ -1.78
SMC4-218ENST00000486711 CLDN1O95832 211 aa3.91□□□□□ -1.78
SMC4-218ENST00000486711 CCDC192P0DO97 292 aa3.91□□□□□ -1.78
SMC4-218ENST00000486711 ZNF26P17031 533 aaPredicted RBP3.91□□□□□ -1.78
SMC4-218ENST00000486711 PRKACGP22612 351 aa3.91□□□□□ -1.78
SMC4-218ENST00000486711 GPR183P32249 361 aa3.91□□□□□ -1.78
SMC4-218ENST00000486711 NSFP46459 744 aaKnown RBP3.91□□□□□ -1.78
SMC4-218ENST00000486711 TNFSF10P50591 281 aa3.91□□□□□ -1.78
SMC4-218ENST00000486711 BTG1P62324 171 aa3.91□□□□□ -1.78
SMC4-218ENST00000486711 GCKRQ14397 625 aa3.91□□□□□ -1.78
SMC4-218ENST00000486711 TATDN1Q6P1N9 297 aa3.91□□□□□ -1.78
SMC4-218ENST00000486711 ZSCAN30Q86W11 494 aa3.91□□□□□ -1.78
SMC4-218ENST00000486711 NLRP14Q86W24 1093 aa3.91□□□□□ -1.78
SMC4-218ENST00000486711 STHQ8IWL8 128 aa3.91□□□□□ -1.78
SMC4-218ENST00000486711 BATF2Q8N1L9 274 aa3.91□□□□□ -1.78
SMC4-218ENST00000486711 LEMD2Q8NC56 503 aa3.91□□□□□ -1.78
SMC4-218ENST00000486711 CCDC197Q8NCU1 140 aa3.91□□□□□ -1.78
SMC4-218ENST00000486711 OR4A16Q8NH70 328 aa3.91□□□□□ -1.78
SMC4-218ENST00000486711 URGCPQ8TCY9 931 aa3.91□□□□□ -1.78
SMC4-218ENST00000486711 UBTD2Q8WUN7 234 aa3.91□□□□□ -1.78
SMC4-218ENST00000486711 PRCCQ92733 491 aaPredicted RBP3.91□□□□□ -1.78
SMC4-218ENST00000486711 NTMT1Q9BV86 223 aa3.91□□□□□ -1.78
SMC4-218ENST00000486711 WWTR1Q9GZV5 400 aa3.91□□□□□ -1.78
SMC4-218ENST00000486711 ZNF665Q9H7R5 613 aa3.91□□□□□ -1.78
SMC4-218ENST00000486711 CACNG5Q9UF02 275 aa3.91□□□□□ -1.78
SMC4-218ENST00000486711 STRAPQ9Y3F4 350 aaKnown RBP3.91□□□□□ -1.78
SMC4-218ENST00000486711 TEX264Q9Y6I9 313 aa3.91□□□□□ -1.78
SMC4-218ENST00000486711 KIAA1217Q5T5P2 1943 aa3.91□□□□□ -1.78
SMC4-218ENST00000486711 RNF103-CHMP3A0A140T963 221 aa3.9□□□□□ -1.79
SMC4-218ENST00000486711 RNF103O00237 685 aa3.9□□□□□ -1.79
SMC4-218ENST00000486711 CCSO14618 274 aa3.9□□□□□ -1.79
SMC4-218ENST00000486711 SIGLEC5O15389 551 aa3.9□□□□□ -1.79
SMC4-218ENST00000486711 B4GAT1O43505 415 aa3.9□□□□□ -1.79
SMC4-218ENST00000486711 LRCH4O75427 683 aa3.9□□□□□ -1.79
SMC4-218ENST00000486711 STBD1O95210 358 aa3.9□□□□□ -1.79
SMC4-218ENST00000486711 FGF19O95750 216 aa3.9□□□□□ -1.79
SMC4-218ENST00000486711 EPOP01588 193 aa3.9□□□□□ -1.79
SMC4-218ENST00000486711 LYNP07948 512 aa3.9□□□□□ -1.79
SMC4-218ENST00000486711 MYOGP15173 224 aa3.9□□□□□ -1.79
SMC4-218ENST00000486711 CYP3A5P20815 502 aa3.9□□□□□ -1.79
SMC4-218ENST00000486711 MARCKSP29966 332 aaPredicted RBP3.9□□□□□ -1.79
SMC4-218ENST00000486711 CASP9P55211 416 aa3.9□□□□□ -1.79
SMC4-218ENST00000486711 YBEYP58557 167 aaPredicted RBP3.9□□□□□ -1.79
SMC4-218ENST00000486711 KRTAP10-3P60369 221 aa3.9□□□□□ -1.79
SMC4-218ENST00000486711 ABCE1P61221 599 aaKnown RBP3.9□□□□□ -1.79
SMC4-218ENST00000486711 GK2Q14410 553 aaPredicted RBP3.9□□□□□ -1.79
SMC4-218ENST00000486711 MTF1Q14872 753 aa3.9□□□□□ -1.79
SMC4-218ENST00000486711 C3AR1Q16581 482 aa3.9□□□□□ -1.79
SMC4-218ENST00000486711 RFTN2Q52LD8 501 aaPredicted RBP3.9□□□□□ -1.79
SMC4-218ENST00000486711 LCE3CQ5T5A8 94 aa3.9□□□□□ -1.79
SMC4-218ENST00000486711 DND1Q8IYX4 353 aaKnown RBP3.9□□□□□ -1.79
SMC4-218ENST00000486711 ADAD2Q8NCV1 583 aaKnown RBP3.9□□□□□ -1.79
SMC4-218ENST00000486711 NUP37Q8NFH4 326 aa3.9□□□□□ -1.79
SMC4-218ENST00000486711 OR9Q2Q8NGE9 314 aa3.9□□□□□ -1.79
SMC4-218ENST00000486711 OR5M9Q8NGP3 310 aa3.9□□□□□ -1.79
SMC4-218ENST00000486711 EXOC6Q8TAG9 804 aa3.9□□□□□ -1.79
SMC4-218ENST00000486711 ZNF519Q8TB69 540 aa3.9□□□□□ -1.79
SMC4-218ENST00000486711 CD99L2Q8TCZ2 262 aa3.9□□□□□ -1.79
SMC4-218ENST00000486711 SLC13A3Q8WWT9 602 aa3.9□□□□□ -1.79
SMC4-218ENST00000486711 SLCO2A1Q92959 643 aa3.9□□□□□ -1.79
SMC4-218ENST00000486711 DTD2Q96FN9 168 aa3.9□□□□□ -1.79
SMC4-218ENST00000486711 ART5Q96L15 291 aa3.9□□□□□ -1.79
SMC4-218ENST00000486711 FAM218AQ96MZ4 157 aa3.9□□□□□ -1.79
SMC4-218ENST00000486711 TMEM237Q96Q45 408 aa3.9□□□□□ -1.79
SMC4-218ENST00000486711 ZNF300Q96RE9 604 aaPredicted RBP3.9□□□□□ -1.79
SMC4-218ENST00000486711 S1PR3Q99500 378 aa3.9□□□□□ -1.79
SMC4-218ENST00000486711 SSX3Q99909 188 aa3.9□□□□□ -1.79
SMC4-218ENST00000486711 TRPV6Q9H1D0 765 aa3.9□□□□□ -1.79
SMC4-218ENST00000486711 DCLRE1BQ9H816 532 aa3.9□□□□□ -1.79
SMC4-218ENST00000486711 SYTL2Q9HCH5 934 aa3.9□□□□□ -1.79
SMC4-218ENST00000486711 ACOXLQ9NUZ1 547 aa3.9□□□□□ -1.79
SMC4-218ENST00000486711 MED17Q9NVC6 651 aa3.9□□□□□ -1.79
SMC4-218ENST00000486711 TEX10Q9NXF1 929 aaPredicted RBP3.9□□□□□ -1.79
SMC4-218ENST00000486711 NLGN3Q9NZ94 848 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms