RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 CERS1P27544 350 aa12.09□□□□□ -0.47
HDAC6-229ENST00000486665 TIA1P31483 386 aaKnown RBP eCLIP12.09□□□□□ -0.47
HDAC6-229ENST00000486665 RORAP35398 523 aa12.09□□□□□ -0.47
HDAC6-229ENST00000486665 ARFIP1P53367 373 aa12.09□□□□□ -0.47
HDAC6-229ENST00000486665 CBX1P83916 185 aa12.09□□□□□ -0.47
HDAC6-229ENST00000486665 SLAMF1Q13291 335 aa12.09□□□□□ -0.47
HDAC6-229ENST00000486665 SPIN4Q56A73 249 aa12.09□□□□□ -0.47
HDAC6-229ENST00000486665 CCNYL2Q5T2Q4 361 aa12.09□□□□□ -0.47
HDAC6-229ENST00000486665 IL23RQ5VWK5 629 aa12.09□□□□□ -0.47
HDAC6-229ENST00000486665 MRM1Q6IN84 353 aaKnown RBP12.09□□□□□ -0.47
HDAC6-229ENST00000486665 LCN10Q6JVE6 187 aa12.09□□□□□ -0.47
HDAC6-229ENST00000486665 RHBDD2Q6NTF9 364 aa12.09□□□□□ -0.47
HDAC6-229ENST00000486665 GALNT18Q6P9A2 607 aa12.09□□□□□ -0.47
HDAC6-229ENST00000486665 ACAD11Q709F0 780 aa12.09□□□□□ -0.47
HDAC6-229ENST00000486665 FNDC5Q8NAU1 212 aa12.09□□□□□ -0.47
HDAC6-229ENST00000486665 CEP70Q8NHQ1 597 aa12.09□□□□□ -0.47
HDAC6-229ENST00000486665 TTC9Q92623 222 aa12.09□□□□□ -0.47
HDAC6-229ENST00000486665 CLIP3Q96DZ5 547 aa12.09□□□□□ -0.47
HDAC6-229ENST00000486665 MMABQ96EY8 250 aaPredicted RBP12.09□□□□□ -0.47
HDAC6-229ENST00000486665 METTL2AQ96IZ6 378 aaKnown RBP12.09□□□□□ -0.47
HDAC6-229ENST00000486665 MARK4Q96L34 752 aa12.09□□□□□ -0.47
HDAC6-229ENST00000486665 GBP5Q96PP8 586 aa12.09□□□□□ -0.47
HDAC6-229ENST00000486665 SERINC2Q96SA4 455 aa12.09□□□□□ -0.47
HDAC6-229ENST00000486665 SPRY4Q9C004 299 aa12.09□□□□□ -0.47
HDAC6-229ENST00000486665 SLC7A5P2Q9GIP4 190 aa12.09□□□□□ -0.47
HDAC6-229ENST00000486665 AKIRIN1Q9H9L7 192 aaPredicted RBP12.09□□□□□ -0.47
HDAC6-229ENST00000486665 TCF7L2Q9NQB0 619 aa12.09□□□□□ -0.47
HDAC6-229ENST00000486665 SLC22A11Q9NSA0 550 aa12.09□□□□□ -0.47
HDAC6-229ENST00000486665 FOXJ2Q9P0K8 574 aa12.09□□□□□ -0.47
HDAC6-229ENST00000486665 BAIAP2L1Q9UHR4 511 aa12.09□□□□□ -0.47
HDAC6-229ENST00000486665 ADAM29Q9UKF5 820 aa12.09□□□□□ -0.47
HDAC6-229ENST00000486665 ASB4Q9Y574 426 aa12.09□□□□□ -0.47
HDAC6-229ENST00000486665 PCDHGA8Q9Y5G5 932 aa12.09□□□□□ -0.47
HDAC6-229ENST00000486665 MAU2Q9Y6X3 613 aa12.09□□□□□ -0.47
HDAC6-229ENST00000486665 BOD1L1Q8NFC6 3051 aa12.08□□□□□ -0.48
HDAC6-229ENST00000486665 E9PBE3 544 aa12.08□□□□□ -0.48
HDAC6-229ENST00000486665 CHST10O43529 356 aa12.08□□□□□ -0.48
HDAC6-229ENST00000486665 KLHL41O60662 606 aa12.08□□□□□ -0.48
HDAC6-229ENST00000486665 SCELO95171 688 aa12.08□□□□□ -0.48
HDAC6-229ENST00000486665 FAM107AO95990 144 aa12.08□□□□□ -0.48
HDAC6-229ENST00000486665 ANXA4P09525 319 aaPredicted RBP12.08□□□□□ -0.48
HDAC6-229ENST00000486665 BCKDHAP12694 445 aa12.08□□□□□ -0.48
HDAC6-229ENST00000486665 AVPR1BP47901 424 aa12.08□□□□□ -0.48
HDAC6-229ENST00000486665 DIO3P55073 304 aa12.08□□□□□ -0.48
HDAC6-229ENST00000486665 MTTPP55157 894 aa12.08□□□□□ -0.48
HDAC6-229ENST00000486665 TMPRSS3P57727 454 aa12.08□□□□□ -0.48
HDAC6-229ENST00000486665 ERVK-8P63133 956 aa12.08□□□□□ -0.48
HDAC6-229ENST00000486665 MAT1AQ00266 395 aaKnown RBP12.08□□□□□ -0.48
HDAC6-229ENST00000486665 SYT16Q17RD7 645 aa12.08□□□□□ -0.48
HDAC6-229ENST00000486665 SMU1Q2TAY7 513 aa12.08□□□□□ -0.48
HDAC6-229ENST00000486665 ZNF385CQ66K41 422 aaPredicted RBP12.08□□□□□ -0.48
HDAC6-229ENST00000486665 OGFOD2Q6N063 350 aa12.08□□□□□ -0.48
HDAC6-229ENST00000486665 PAGE2Q7Z2X7 111 aa12.08□□□□□ -0.48
HDAC6-229ENST00000486665 TIPARPQ7Z3E1 657 aaKnown RBP12.08□□□□□ -0.48
HDAC6-229ENST00000486665 SPATA19Q7Z5L4 167 aa12.08□□□□□ -0.48
HDAC6-229ENST00000486665 NUDT13Q86X67 352 aa12.08□□□□□ -0.48
HDAC6-229ENST00000486665 CA13Q8N1Q1 262 aa12.08□□□□□ -0.48
HDAC6-229ENST00000486665 ZCCHC7Q8N3Z6 543 aaKnown RBP12.08□□□□□ -0.48
HDAC6-229ENST00000486665 C16orf78Q8WTQ4 265 aa12.08□□□□□ -0.48
HDAC6-229ENST00000486665 KCNE4Q8WWG9 221 aa12.08□□□□□ -0.48
HDAC6-229ENST00000486665 STON2Q8WXE9 905 aa12.08□□□□□ -0.48
HDAC6-229ENST00000486665 UCN3Q969E3 161 aa12.08□□□□□ -0.48
HDAC6-229ENST00000486665 COL26A1Q96A83 441 aa12.08□□□□□ -0.48
HDAC6-229ENST00000486665 TM4SF18Q96CE8 201 aa12.08□□□□□ -0.48
HDAC6-229ENST00000486665 RILPQ96NA2 401 aa12.08□□□□□ -0.48
HDAC6-229ENST00000486665 SLC46A1Q96NT5 459 aa12.08□□□□□ -0.48
HDAC6-229ENST00000486665 MAPKAP1Q9BPZ7 522 aa12.08□□□□□ -0.48
HDAC6-229ENST00000486665 ZPBPQ9BS86 351 aa12.08□□□□□ -0.48
HDAC6-229ENST00000486665 ASPSCR1Q9BZE9 553 aa12.08□□□□□ -0.48
HDAC6-229ENST00000486665 ROGDIQ9GZN7 287 aa12.08□□□□□ -0.48
HDAC6-229ENST00000486665 COPS7BQ9H9Q2 264 aaPredicted RBP12.08□□□□□ -0.48
HDAC6-229ENST00000486665 TXLNGQ9NUQ3 528 aa12.08□□□□□ -0.48
HDAC6-229ENST00000486665 KCMF1Q9P0J7 381 aa12.08□□□□□ -0.48
HDAC6-229ENST00000486665 MCM8Q9UJA3 840 aa12.08□□□□□ -0.48
HDAC6-229ENST00000486665 SRPK3Q9UPE1 567 aa12.08□□□□□ -0.48
HDAC6-229ENST00000486665 SSUH2Q9Y2M2 353 aa12.08□□□□□ -0.48
HDAC6-229ENST00000486665 TMED5Q9Y3A6 229 aa12.08□□□□□ -0.48
HDAC6-229ENST00000486665 HECTD1Q9ULT8 2610 aa12.07□□□□□ -0.48
HDAC6-229ENST00000486665 A0A1B0GX78 115 aa12.07□□□□□ -0.48
HDAC6-229ENST00000486665 H0YIG0 161 aa12.07□□□□□ -0.48
HDAC6-229ENST00000486665 MEN1O00255 615 aa12.07□□□□□ -0.48
HDAC6-229ENST00000486665 B3GALT2O43825 422 aa12.07□□□□□ -0.48
HDAC6-229ENST00000486665 CPNE3O75131 537 aaKnown RBP12.07□□□□□ -0.48
HDAC6-229ENST00000486665 STK17BO94768 372 aa12.07□□□□□ -0.48
HDAC6-229ENST00000486665 MYO1DO94832 1006 aa12.07□□□□□ -0.48
HDAC6-229ENST00000486665 HBQ1P09105 142 aa12.07□□□□□ -0.48
HDAC6-229ENST00000486665 FAM58BPP0C7Q3 252 aa12.07□□□□□ -0.48
HDAC6-229ENST00000486665 G6PDP11413 515 aa12.07□□□□□ -0.48
HDAC6-229ENST00000486665 SDC1P18827 310 aa12.07□□□□□ -0.48
HDAC6-229ENST00000486665 SLC5A2P31639 672 aa12.07□□□□□ -0.48
HDAC6-229ENST00000486665 TSFMP43897 325 aaKnown RBP12.07□□□□□ -0.48
HDAC6-229ENST00000486665 LIM2P55344 173 aa12.07□□□□□ -0.48
HDAC6-229ENST00000486665 HNRNPH2P55795 449 aaKnown RBP12.07□□□□□ -0.48
HDAC6-229ENST00000486665 PRMT9Q6P2P2 845 aa12.07□□□□□ -0.48
HDAC6-229ENST00000486665 CYP20A1Q6UW02 462 aa12.07□□□□□ -0.48
HDAC6-229ENST00000486665 COX15Q7KZN9 410 aa12.07□□□□□ -0.48
HDAC6-229ENST00000486665 DSELQ8IZU8 1212 aa12.07□□□□□ -0.48
HDAC6-229ENST00000486665 MMP21Q8N119 569 aa12.07□□□□□ -0.48
HDAC6-229ENST00000486665 LIX1Q8N485 282 aa12.07□□□□□ -0.48
HDAC6-229ENST00000486665 GALNT6Q8NCL4 622 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms