RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 SKP1P63208 163 aa12.16□□□□□ -0.46
SSR4-211ENST00000486204 RUNX2Q13950 521 aa12.16□□□□□ -0.46
SSR4-211ENST00000486204 TMEM35AQ53FP2 167 aa12.16□□□□□ -0.46
SSR4-211ENST00000486204 TCHHL1Q5QJ38 904 aaPredicted RBP12.16□□□□□ -0.46
SSR4-211ENST00000486204 DEPDC1Q5TB30 811 aa12.16□□□□□ -0.46
SSR4-211ENST00000486204 FRG2Q64ET8 278 aa12.16□□□□□ -0.46
SSR4-211ENST00000486204 CPZQ66K79 652 aa12.16□□□□□ -0.46
SSR4-211ENST00000486204 TRIM40Q6P9F5 258 aa12.16□□□□□ -0.46
SSR4-211ENST00000486204 GPRIN3Q6ZVF9 776 aa12.16□□□□□ -0.46
SSR4-211ENST00000486204 MED25Q71SY5 747 aa12.16□□□□□ -0.46
SSR4-211ENST00000486204 MILR1Q7Z6M3 343 aa12.16□□□□□ -0.46
SSR4-211ENST00000486204 C10orf107Q8IVU9 208 aa12.16□□□□□ -0.46
SSR4-211ENST00000486204 APLFQ8IW19 511 aaPredicted RBP12.16□□□□□ -0.46
SSR4-211ENST00000486204 CCNYL1Q8N7R7 359 aa12.16□□□□□ -0.46
SSR4-211ENST00000486204 CCDC63Q8NA47 563 aa12.16□□□□□ -0.46
SSR4-211ENST00000486204 REPS1Q96D71 796 aa12.16□□□□□ -0.46
SSR4-211ENST00000486204 CMTM7Q96FZ5 175 aa12.16□□□□□ -0.46
SSR4-211ENST00000486204 PEX11GQ96HA9 241 aa12.16□□□□□ -0.46
SSR4-211ENST00000486204 MAGEB10Q96LZ2 347 aaPredicted RBP12.16□□□□□ -0.46
SSR4-211ENST00000486204 FRG2BQ96QU4 278 aa12.16□□□□□ -0.46
SSR4-211ENST00000486204 MECRQ9BV79 373 aa12.16□□□□□ -0.46
SSR4-211ENST00000486204 YIPF2Q9BWQ6 316 aa12.16□□□□□ -0.46
SSR4-211ENST00000486204 RBCK1Q9BYM8 510 aa12.16□□□□□ -0.46
SSR4-211ENST00000486204 VN1R1Q9GZP7 353 aa12.16□□□□□ -0.46
SSR4-211ENST00000486204 OR51B5Q9H339 312 aa12.16□□□□□ -0.46
SSR4-211ENST00000486204 CLK4Q9HAZ1 481 aaKnown RBP12.16□□□□□ -0.46
SSR4-211ENST00000486204 SEMA3GQ9NS98 782 aa12.16□□□□□ -0.46
SSR4-211ENST00000486204 FARSBQ9NSD9 589 aaKnown RBP12.16□□□□□ -0.46
SSR4-211ENST00000486204 PSD3Q9NYI0 1048 aa12.16□□□□□ -0.46
SSR4-211ENST00000486204 MAP10Q9P2G4 905 aa12.16□□□□□ -0.46
SSR4-211ENST00000486204 C3orf18Q9UK00 162 aa12.16□□□□□ -0.46
SSR4-211ENST00000486204 STK38LQ9Y2H1 464 aa12.16□□□□□ -0.46
SSR4-211ENST00000486204 ACTL7BQ9Y614 415 aa12.16□□□□□ -0.46
SSR4-211ENST00000486204 AKAP9Q99996 3911 aa12.16□□□□□ -0.46
SSR4-211ENST00000486204 RTCAO00442 366 aaKnown RBP12.15□□□□□ -0.46
SSR4-211ENST00000486204 SH3BGRLO75368 114 aa12.15□□□□□ -0.46
SSR4-211ENST00000486204 DNAJB5O75953 348 aa12.15□□□□□ -0.46
SSR4-211ENST00000486204 MLYCDO95822 493 aa12.15□□□□□ -0.46
SSR4-211ENST00000486204 IGHEP01854 428 aa12.15□□□□□ -0.46
SSR4-211ENST00000486204 ALDH3A1P30838 453 aa12.15□□□□□ -0.46
SSR4-211ENST00000486204 HPDP32754 393 aaPredicted RBP12.15□□□□□ -0.46
SSR4-211ENST00000486204 HTR6P50406 440 aa12.15□□□□□ -0.46
SSR4-211ENST00000486204 PKNOX1P55347 436 aa12.15□□□□□ -0.46
SSR4-211ENST00000486204 NAA20P61599 178 aa12.15□□□□□ -0.46
SSR4-211ENST00000486204 BTN3A2P78410 334 aa12.15□□□□□ -0.46
SSR4-211ENST00000486204 CHAF1BQ13112 559 aa12.15□□□□□ -0.46
SSR4-211ENST00000486204 CUL3Q13618 768 aa12.15□□□□□ -0.46
SSR4-211ENST00000486204 MPP2Q14168 576 aa12.15□□□□□ -0.46
SSR4-211ENST00000486204 PRR30Q53SZ7 412 aaPredicted RBP12.15□□□□□ -0.46
SSR4-211ENST00000486204 C10orf62Q5T681 223 aaPredicted RBP12.15□□□□□ -0.46
SSR4-211ENST00000486204 TMEM205Q6UW68 189 aa12.15□□□□□ -0.46
SSR4-211ENST00000486204 KIRREL2Q6UWL6 708 aa12.15□□□□□ -0.46
SSR4-211ENST00000486204 CDYL2Q8N8U2 506 aa12.15□□□□□ -0.46
SSR4-211ENST00000486204 OR6Y1Q8NGX8 325 aa12.15□□□□□ -0.46
SSR4-211ENST00000486204 NACC2Q96BF6 587 aa12.15□□□□□ -0.46
SSR4-211ENST00000486204 TLCD1Q96CP7 247 aa12.15□□□□□ -0.46
SSR4-211ENST00000486204 KCNC2Q96PR1 638 aa12.15□□□□□ -0.46
SSR4-211ENST00000486204 OR1F2PQ96R84 312 aa12.15□□□□□ -0.46
SSR4-211ENST00000486204 KCNA7Q96RP8 456 aa12.15□□□□□ -0.46
SSR4-211ENST00000486204 SERINC2Q96SA4 455 aa12.15□□□□□ -0.46
SSR4-211ENST00000486204 GATA5Q9BWX5 397 aaPredicted RBP12.15□□□□□ -0.46
SSR4-211ENST00000486204 SORBS1Q9BX66 1292 aaKnown RBP12.15□□□□□ -0.46
SSR4-211ENST00000486204 NPLQ9BXD5 320 aaPredicted RBP12.15□□□□□ -0.46
SSR4-211ENST00000486204 TRIM55Q9BYV6 548 aa12.15□□□□□ -0.46
SSR4-211ENST00000486204 CENPHQ9H3R5 247 aa12.15□□□□□ -0.46
SSR4-211ENST00000486204 TMBIM4Q9HC24 238 aa12.15□□□□□ -0.46
SSR4-211ENST00000486204 TNFRSF12AQ9NP84 129 aa12.15□□□□□ -0.46
SSR4-211ENST00000486204 P4HTMQ9NXG6 502 aa12.15□□□□□ -0.46
SSR4-211ENST00000486204 MKL2Q9ULH7 1088 aa12.15□□□□□ -0.46
SSR4-211ENST00000486204 ITPR3Q14573 2671 aa12.15□□□□□ -0.46
SSR4-211ENST00000486204 ADGRG4Q8IZF6 3080 aa12.14□□□□□ -0.47
SSR4-211ENST00000486204 LOC102723996A0A087X1L8 192 aa12.14□□□□□ -0.47
SSR4-211ENST00000486204 OR2W5A6NFC9 320 aa12.14□□□□□ -0.47
SSR4-211ENST00000486204 ARGFXA6NJG6 315 aa12.14□□□□□ -0.47
SSR4-211ENST00000486204 MASP2O00187 686 aa12.14□□□□□ -0.47
SSR4-211ENST00000486204 SAP18O00422 153 aaKnown RBP12.14□□□□□ -0.47
SSR4-211ENST00000486204 TRIM13O60858 407 aa12.14□□□□□ -0.47
SSR4-211ENST00000486204 ESRRBO95718 433 aa12.14□□□□□ -0.47
SSR4-211ENST00000486204 PDYNP01213 254 aa12.14□□□□□ -0.47
SSR4-211ENST00000486204 ENO1P06733 434 aaKnown RBP12.14□□□□□ -0.47
SSR4-211ENST00000486204 CYC1P08574 325 aa12.14□□□□□ -0.47
SSR4-211ENST00000486204 DHRS4L1P0CG22 281 aa12.14□□□□□ -0.47
SSR4-211ENST00000486204 RNH1P13489 461 aaKnown RBP12.14□□□□□ -0.47
SSR4-211ENST00000486204 IL10P22301 178 aa12.14□□□□□ -0.47
SSR4-211ENST00000486204 HIST1H1TP22492 207 aaPredicted RBP12.14□□□□□ -0.47
SSR4-211ENST00000486204 ATP5A1P25705 553 aaKnown RBP12.14□□□□□ -0.47
SSR4-211ENST00000486204 TSFMP43897 325 aaKnown RBP12.14□□□□□ -0.47
SSR4-211ENST00000486204 PGDP52209 483 aa12.14□□□□□ -0.47
SSR4-211ENST00000486204 ARFIP1P53367 373 aa12.14□□□□□ -0.47
SSR4-211ENST00000486204 EMP2P54851 167 aa12.14□□□□□ -0.47
SSR4-211ENST00000486204 MTTPP55157 894 aa12.14□□□□□ -0.47
SSR4-211ENST00000486204 FOXA1P55317 472 aa12.14□□□□□ -0.47
SSR4-211ENST00000486204 PHEXP78562 749 aa12.14□□□□□ -0.47
SSR4-211ENST00000486204 RHAGQ02094 409 aa12.14□□□□□ -0.47
SSR4-211ENST00000486204 CHSY3Q70JA7 882 aa12.14□□□□□ -0.47
SSR4-211ENST00000486204 ACOT4Q8N9L9 421 aa12.14□□□□□ -0.47
SSR4-211ENST00000486204 TMEM52Q8NDY8 209 aa12.14□□□□□ -0.47
SSR4-211ENST00000486204 OR11G2Q8NGC1 345 aa12.14□□□□□ -0.47
SSR4-211ENST00000486204 TBC1D20Q96BZ9 403 aa12.14□□□□□ -0.47
SSR4-211ENST00000486204 MTFMTQ96DP5 389 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms