RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 TBC1D20Q96BZ9 403 aa10.76□□□□□ -0.69
NUP50-216ENST00000486184 C19orf60Q96EN9 201 aa10.76□□□□□ -0.69
NUP50-216ENST00000486184 VPS50Q96JG6 964 aa10.76□□□□□ -0.69
NUP50-216ENST00000486184 PPP3R2Q96LZ3 170 aa10.76□□□□□ -0.69
NUP50-216ENST00000486184 C7orf26Q96N11 449 aa10.76□□□□□ -0.69
NUP50-216ENST00000486184 CRB3Q9BUF7 120 aa10.76□□□□□ -0.69
NUP50-216ENST00000486184 TGIF2Q9GZN2 237 aa10.76□□□□□ -0.69
NUP50-216ENST00000486184 C20orf27Q9GZN8 174 aa10.76□□□□□ -0.69
NUP50-216ENST00000486184 DDX31Q9H8H2 851 aaKnown RBP10.76□□□□□ -0.69
NUP50-216ENST00000486184 LRTM1Q9HBL6 345 aa10.76□□□□□ -0.69
NUP50-216ENST00000486184 LYRM4Q9HD34 91 aa10.76□□□□□ -0.69
NUP50-216ENST00000486184 SLC22A11Q9NSA0 550 aa10.76□□□□□ -0.69
NUP50-216ENST00000486184 PNPOQ9NVS9 261 aa10.76□□□□□ -0.69
NUP50-216ENST00000486184 C1orf109Q9NX04 203 aa10.76□□□□□ -0.69
NUP50-216ENST00000486184 VTI1BQ9UEU0 232 aa10.76□□□□□ -0.69
NUP50-216ENST00000486184 MARCOQ9UEW3 520 aaPredicted RBP10.76□□□□□ -0.69
NUP50-216ENST00000486184 HAO1Q9UJM8 370 aa10.76□□□□□ -0.69
NUP50-216ENST00000486184 MKL2Q9ULH7 1088 aa10.76□□□□□ -0.69
NUP50-216ENST00000486184 DAPP1Q9UN19 280 aa10.76□□□□□ -0.69
NUP50-216ENST00000486184 MRPS18BQ9Y676 258 aaKnown RBP10.76□□□□□ -0.69
NUP50-216ENST00000486184 ACACAQ13085 2346 aa10.75□□□□□ -0.69
NUP50-216ENST00000486184 IGLV3-12A0A075B6K2 115 aa10.75□□□□□ -0.69
NUP50-216ENST00000486184 BLACEA4D250 179 aa10.75□□□□□ -0.69
NUP50-216ENST00000486184 CLDN4O14493 209 aa10.75□□□□□ -0.69
NUP50-216ENST00000486184 PCDH7O60245 1069 aa10.75□□□□□ -0.69
NUP50-216ENST00000486184 B4GALT2O60909 372 aa10.75□□□□□ -0.69
NUP50-216ENST00000486184 EEDO75530 441 aaKnown RBP10.75□□□□□ -0.69
NUP50-216ENST00000486184 CREG1O75629 220 aa10.75□□□□□ -0.69
NUP50-216ENST00000486184 CDC123O75794 336 aaPredicted RBP10.75□□□□□ -0.69
NUP50-216ENST00000486184 SCELO95171 688 aa10.75□□□□□ -0.69
NUP50-216ENST00000486184 BMP10O95393 424 aa10.75□□□□□ -0.69
NUP50-216ENST00000486184 GBAP04062 536 aa10.75□□□□□ -0.69
NUP50-216ENST00000486184 CAPNS1P04632 268 aa10.75□□□□□ -0.69
NUP50-216ENST00000486184 FHP07954 510 aa10.75□□□□□ -0.69
NUP50-216ENST00000486184 FAM58BPP0C7Q3 252 aa10.75□□□□□ -0.69
NUP50-216ENST00000486184 MAPK1P28482 360 aa10.75□□□□□ -0.69
NUP50-216ENST00000486184 OTX2P32243 289 aa10.75□□□□□ -0.69
NUP50-216ENST00000486184 LIM2P55344 173 aa10.75□□□□□ -0.69
NUP50-216ENST00000486184 TMPRSS3P57727 454 aa10.75□□□□□ -0.69
NUP50-216ENST00000486184 RPL38P63173 70 aaKnown RBP10.75□□□□□ -0.69
NUP50-216ENST00000486184 KLC1Q07866 573 aa10.75□□□□□ -0.69
NUP50-216ENST00000486184 RUNX2Q13950 521 aa10.75□□□□□ -0.69
NUP50-216ENST00000486184 UGT3A2Q3SY77 523 aa10.75□□□□□ -0.69
NUP50-216ENST00000486184 TUBB8Q3ZCM7 444 aa10.75□□□□□ -0.69
NUP50-216ENST00000486184 ATP6AP1LQ52LC2 224 aa10.75□□□□□ -0.69
NUP50-216ENST00000486184 FAM47EQ6ZV65 393 aa10.75□□□□□ -0.69
NUP50-216ENST00000486184 GPR180Q86V85 440 aa10.75□□□□□ -0.69
NUP50-216ENST00000486184 WDR75Q8IWA0 830 aaKnown RBP10.75□□□□□ -0.69
NUP50-216ENST00000486184 ZC3H7AQ8IWR0 971 aaKnown RBP10.75□□□□□ -0.69
NUP50-216ENST00000486184 ZNF454Q8N9F8 522 aa10.75□□□□□ -0.69
NUP50-216ENST00000486184 FAM47BQ8NA70 645 aa10.75□□□□□ -0.69
NUP50-216ENST00000486184 CDC26Q8NHZ8 85 aa10.75□□□□□ -0.69
NUP50-216ENST00000486184 PIWIL2Q8TC59 973 aaKnown RBP10.75□□□□□ -0.69
NUP50-216ENST00000486184 CHTF18Q8WVB6 975 aa10.75□□□□□ -0.69
NUP50-216ENST00000486184 TUBGCP3Q96CW5 907 aa10.75□□□□□ -0.69
NUP50-216ENST00000486184 APIPQ96GX9 242 aa10.75□□□□□ -0.69
NUP50-216ENST00000486184 METTL2AQ96IZ6 378 aaKnown RBP10.75□□□□□ -0.69
NUP50-216ENST00000486184 SLC45A3Q96JT2 553 aa10.75□□□□□ -0.69
NUP50-216ENST00000486184 PPP1R36Q96LQ0 422 aa10.75□□□□□ -0.69
NUP50-216ENST00000486184 TUBB1Q9H4B7 451 aa10.75□□□□□ -0.69
NUP50-216ENST00000486184 SEMA3GQ9NS98 782 aa10.75□□□□□ -0.69
NUP50-216ENST00000486184 IL17BQ9UHF5 180 aa10.75□□□□□ -0.69
NUP50-216ENST00000486184 MCM8Q9UJA3 840 aa10.75□□□□□ -0.69
NUP50-216ENST00000486184 C3orf18Q9UK00 162 aa10.75□□□□□ -0.69
NUP50-216ENST00000486184 PTGDR2Q9Y5Y4 395 aa10.75□□□□□ -0.69
NUP50-216ENST00000486184 CROCCQ5TZA2 2017 aa10.75□□□□□ -0.69
NUP50-216ENST00000486184 A0A0A6YYD5 115 aa10.74□□□□□ -0.69
NUP50-216ENST00000486184 ATP6AP2A0A1C7CYW4 349 aa10.74□□□□□ -0.69
NUP50-216ENST00000486184 CDC14CA4D256 554 aa10.74□□□□□ -0.69
NUP50-216ENST00000486184 VSTM2BA6NLU5 285 aa10.74□□□□□ -0.69
NUP50-216ENST00000486184 IDSB3KWA1 339 aa10.74□□□□□ -0.69
NUP50-216ENST00000486184 TERTO14746 1132 aaKnown RBP10.74□□□□□ -0.69
NUP50-216ENST00000486184 HDAC3O15379 428 aa10.74□□□□□ -0.69
NUP50-216ENST00000486184 VPS4BO75351 444 aa10.74□□□□□ -0.69
NUP50-216ENST00000486184 JRKO75564 520 aa10.74□□□□□ -0.69
NUP50-216ENST00000486184 ATP6AP2O75787 350 aa10.74□□□□□ -0.69
NUP50-216ENST00000486184 ANXA4P09525 319 aaPredicted RBP10.74□□□□□ -0.69
NUP50-216ENST00000486184 NR2F6P10588 404 aa10.74□□□□□ -0.69
NUP50-216ENST00000486184 F8A1P23610 371 aa10.74□□□□□ -0.69
NUP50-216ENST00000486184 PRPH2P23942 346 aa10.74□□□□□ -0.69
NUP50-216ENST00000486184 TPP2P29144 1249 aaPredicted RBP10.74□□□□□ -0.69
NUP50-216ENST00000486184 TIA1P31483 386 aaKnown RBP eCLIP10.74□□□□□ -0.69
NUP50-216ENST00000486184 GSTM5P46439 218 aa10.74□□□□□ -0.69
NUP50-216ENST00000486184 EMP2P54851 167 aa10.74□□□□□ -0.69
NUP50-216ENST00000486184 TRA2BP62995 288 aaKnown RBP10.74□□□□□ -0.69
NUP50-216ENST00000486184 GUCY1A3Q02108 690 aa10.74□□□□□ -0.69
NUP50-216ENST00000486184 TNFRSF17Q02223 184 aa10.74□□□□□ -0.69
NUP50-216ENST00000486184 TBL3Q12788 808 aaKnown RBP10.74□□□□□ -0.69
NUP50-216ENST00000486184 SLC13A2Q13183 592 aa10.74□□□□□ -0.69
NUP50-216ENST00000486184 MAD2L1Q13257 205 aaPredicted RBP10.74□□□□□ -0.69
NUP50-216ENST00000486184 ERV3-1Q14264 604 aa10.74□□□□□ -0.69
NUP50-216ENST00000486184 SSPNQ14714 243 aa10.74□□□□□ -0.69
NUP50-216ENST00000486184 ATG14Q6ZNE5 492 aa10.74□□□□□ -0.69
NUP50-216ENST00000486184 ZNF595Q8IYB9 648 aa10.74□□□□□ -0.69
NUP50-216ENST00000486184 SPSB2Q99619 263 aa10.74□□□□□ -0.69
NUP50-216ENST00000486184 MAPKAP1Q9BPZ7 522 aa10.74□□□□□ -0.69
NUP50-216ENST00000486184 FAIM2Q9BWQ8 316 aa10.74□□□□□ -0.69
NUP50-216ENST00000486184 EBPLQ9BY08 206 aa10.74□□□□□ -0.69
NUP50-216ENST00000486184 ZNF717Q9BY31 904 aaPredicted RBP10.74□□□□□ -0.69
NUP50-216ENST00000486184 NUF2Q9BZD4 464 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms