RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 RELNP78509 3460 aa3.9□□□□□ -1.79
SMARCC1-207ENST00000485833 UTP20O75691 2785 aaKnown RBP3.9□□□□□ -1.79
SMARCC1-207ENST00000485833 ITPR3Q14573 2671 aa3.89□□□□□ -1.79
SMARCC1-207ENST00000485833 ABCA7Q8IZY2 2146 aa3.89□□□□□ -1.79
SMARCC1-207ENST00000485833 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.89□□□□□ -1.79
SMARCC1-207ENST00000485833 RANBP6O60518 1105 aaKnown RBP3.89□□□□□ -1.79
SMARCC1-207ENST00000485833 SAT1P21673 171 aa3.89□□□□□ -1.79
SMARCC1-207ENST00000485833 CDH3P22223 829 aa3.89□□□□□ -1.79
SMARCC1-207ENST00000485833 TCF7P36402 384 aaPredicted RBP3.89□□□□□ -1.79
SMARCC1-207ENST00000485833 MNDAP41218 407 aa3.89□□□□□ -1.79
SMARCC1-207ENST00000485833 LIMK1P53667 647 aa3.89□□□□□ -1.79
SMARCC1-207ENST00000485833 SIM2Q14190 667 aaPredicted RBP3.89□□□□□ -1.79
SMARCC1-207ENST00000485833 SQLEQ14534 574 aa3.89□□□□□ -1.79
SMARCC1-207ENST00000485833 NTRK2Q16620 822 aa3.89□□□□□ -1.79
SMARCC1-207ENST00000485833 ODF4Q2M2E3 257 aa3.89□□□□□ -1.79
SMARCC1-207ENST00000485833 SLC25A53Q5H9E4 307 aa3.89□□□□□ -1.79
SMARCC1-207ENST00000485833 WLSQ5T9L3 541 aa3.89□□□□□ -1.79
SMARCC1-207ENST00000485833 RNASEH2BQ5TBB1 312 aaKnown RBP3.89□□□□□ -1.79
SMARCC1-207ENST00000485833 Q6ZS52 159 aa3.89□□□□□ -1.79
SMARCC1-207ENST00000485833 PTAR1Q7Z6K3 402 aaPredicted RBP3.89□□□□□ -1.79
SMARCC1-207ENST00000485833 NUDT13Q86X67 352 aa3.89□□□□□ -1.79
SMARCC1-207ENST00000485833 EID3Q8N140 333 aa3.89□□□□□ -1.79
SMARCC1-207ENST00000485833 LRRC43Q8N309 656 aa3.89□□□□□ -1.79
SMARCC1-207ENST00000485833 OR10G8Q8NGN5 311 aa3.89□□□□□ -1.79
SMARCC1-207ENST00000485833 ITFG1Q8TB96 612 aa3.89□□□□□ -1.79
SMARCC1-207ENST00000485833 ARHGAP45Q92619 1136 aa3.89□□□□□ -1.79
SMARCC1-207ENST00000485833 FRAT1Q92837 279 aaPredicted RBP3.89□□□□□ -1.79
SMARCC1-207ENST00000485833 CALML4Q96GE6 196 aa3.89□□□□□ -1.79
SMARCC1-207ENST00000485833 B3GALT6Q96L58 329 aa3.89□□□□□ -1.79
SMARCC1-207ENST00000485833 SDF4Q9BRK5 362 aa3.89□□□□□ -1.79
SMARCC1-207ENST00000485833 FTHL17Q9BXU8 183 aa3.89□□□□□ -1.79
SMARCC1-207ENST00000485833 OR2B2Q9GZK3 357 aa3.89□□□□□ -1.79
SMARCC1-207ENST00000485833 MIS12Q9H081 205 aa3.89□□□□□ -1.79
SMARCC1-207ENST00000485833 TMEM117Q9H0C3 514 aa3.89□□□□□ -1.79
SMARCC1-207ENST00000485833 EQTNQ9NQ60 294 aa3.89□□□□□ -1.79
SMARCC1-207ENST00000485833 HEBP1Q9NRV9 189 aa3.89□□□□□ -1.79
SMARCC1-207ENST00000485833 RGS18Q9NS28 235 aa3.89□□□□□ -1.79
SMARCC1-207ENST00000485833 TBC1D22BQ9NU19 505 aa3.89□□□□□ -1.79
SMARCC1-207ENST00000485833 TMEM161AQ9NX61 479 aa3.89□□□□□ -1.79
SMARCC1-207ENST00000485833 DPP3Q9NY33 737 aa3.89□□□□□ -1.79
SMARCC1-207ENST00000485833 NDRG2Q9UN36 371 aaKnown RBP3.89□□□□□ -1.79
SMARCC1-207ENST00000485833 ANGPTL3Q9Y5C1 460 aa3.89□□□□□ -1.79
SMARCC1-207ENST00000485833 KIF26AQ9ULI4 1882 aaPredicted RBP3.89□□□□□ -1.79
SMARCC1-207ENST00000485833 COL5A1P20908 1838 aaPredicted RBP3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 ADAMTS9Q9P2N4 1935 aa3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 SPAARA0A1B0GVQ0 90 aa3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 KPNA7A9QM74 516 aa3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 TEX28O15482 410 aa3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 LRP3O75074 770 aa3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 HSPD1P10809 573 aaKnown RBP3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 TOP1P11387 765 aaKnown RBP3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 GATA1P15976 413 aaPredicted RBP3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 ALOX12P18054 663 aa3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 MMP12P39900 470 aa3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 OPRL1P41146 370 aa3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 MATR3P43243 847 aaKnown RBP eCLIP3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 RPL21P46778 160 aaKnown RBP3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 LEPRP48357 1165 aaKnown RBP3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 SLC11A1P49279 550 aa3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 CLNS1AP54105 237 aaKnown RBP3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 PAX9P55771 341 aa3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 SLC8A3P57103 927 aa3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 ENPP2Q13822 863 aa3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 E2F5Q15329 346 aa3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 MEA1Q16626 185 aa3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 C2CD6Q53TS8 623 aa3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 XKR3Q5GH77 459 aa3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 SPINK14Q6IE38 97 aa3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 Q6ZRP5 223 aa3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 STOX1Q6ZVD7 989 aa3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 SLC24A5Q71RS6 500 aa3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 ECHDC2Q86YB7 292 aa3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 MARCH9Q86YJ5 346 aa3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 TBC1D10CQ8IV04 446 aa3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 LINC00346Q8IVM7 164 aa3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 TAGAPQ8N103 731 aa3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 DEFB124Q8NES8 71 aa3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 OR13C3Q8NGS6 347 aa3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 VANGL1Q8TAA9 524 aaPredicted RBP3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 SMAP2Q8WU79 429 aaPredicted RBP3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 SSMEM1Q8WWF3 244 aa3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 DGCR6LQ9BY27 220 aa3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 MRPL1Q9BYD6 325 aaKnown RBP3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 WWTR1Q9GZV5 400 aa3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 SHARPINQ9H0F6 387 aa3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 WNT5BQ9H1J7 359 aa3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 VAT1LQ9HCJ6 419 aa3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 Q9N2K0 584 aa3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 FAM207AQ9NSI2 230 aaPredicted RBP3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 GIMAP4Q9NUV9 329 aa3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 OR6C2Q9NZP2 312 aa3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 PPP1R3CQ9UQK1 317 aa3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 PCNX3Q9H6A9 2034 aa3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 COL6A6A6NMZ7 2263 aa3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 LRRK2Q5S007 2527 aa3.88□□□□□ -1.79
SMARCC1-207ENST00000485833 PTPRBP23467 1997 aa3.87□□□□□ -1.79
SMARCC1-207ENST00000485833 hCG_1807616A0A1W2PRN6 198 aa3.87□□□□□ -1.79
SMARCC1-207ENST00000485833 MEX3AA1L020 520 aaKnown RBP3.87□□□□□ -1.79
SMARCC1-207ENST00000485833 C2orf81A6NN90 581 aa3.87□□□□□ -1.79
SMARCC1-207ENST00000485833 C15orf61A6NNL5 157 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms