RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 PRAMEF33A0A0G2JMD5 474 aa18.81■□□□□ 0.6
LIMS2-215ENST00000484252 PRAMEF10O60809 474 aa18.81■□□□□ 0.6
LIMS2-215ENST00000484252 LILRB5O75023 590 aa18.81■□□□□ 0.6
LIMS2-215ENST00000484252 FKTNO75072 461 aa18.81■□□□□ 0.6
LIMS2-215ENST00000484252 KLHL18O94889 574 aa18.81■□□□□ 0.6
LIMS2-215ENST00000484252 KLK1P06870 262 aa18.81■□□□□ 0.6
LIMS2-215ENST00000484252 UQCRC2P22695 453 aa18.81■□□□□ 0.6
LIMS2-215ENST00000484252 SERPINB1P30740 379 aa18.81■□□□□ 0.6
LIMS2-215ENST00000484252 RGS6P49758 472 aa18.81■□□□□ 0.6
LIMS2-215ENST00000484252 TAP2Q03519 686 aa18.81■□□□□ 0.6
LIMS2-215ENST00000484252 PRKCDQ05655 676 aa18.81■□□□□ 0.6
LIMS2-215ENST00000484252 ZNF77Q15935 545 aa18.81■□□□□ 0.6
LIMS2-215ENST00000484252 ARMCX4Q5H9R4 360 aa18.81■□□□□ 0.6
LIMS2-215ENST00000484252 PARS2Q7L3T8 475 aaKnown RBP18.81■□□□□ 0.6
LIMS2-215ENST00000484252 LRRC56Q8IYG6 542 aaPredicted RBP18.81■□□□□ 0.6
LIMS2-215ENST00000484252 CDCA4Q9BXL8 241 aa18.81■□□□□ 0.6
LIMS2-215ENST00000484252 TRBC2A0A5B9 178 aa18.81■□□□□ 0.6
LIMS2-215ENST00000484252 SAP18O00422 153 aaKnown RBP18.81■□□□□ 0.6
LIMS2-215ENST00000484252 EFCAB14O75071 495 aa18.81■□□□□ 0.6
LIMS2-215ENST00000484252 MYCP01106 439 aaPredicted RBP18.81■□□□□ 0.6
LIMS2-215ENST00000484252 IFNW1P05000 195 aa18.81■□□□□ 0.6
LIMS2-215ENST00000484252 DBTP11182 482 aaKnown RBP18.81■□□□□ 0.6
LIMS2-215ENST00000484252 S100A5P33763 92 aa18.81■□□□□ 0.6
LIMS2-215ENST00000484252 SOAT1P35610 550 aa18.81■□□□□ 0.6
LIMS2-215ENST00000484252 LIMK1P53667 647 aa18.81■□□□□ 0.6
LIMS2-215ENST00000484252 DSTNP60981 165 aa18.81■□□□□ 0.6
LIMS2-215ENST00000484252 WDR5P61964 334 aaKnown RBP18.81■□□□□ 0.6
LIMS2-215ENST00000484252 FPGSQ05932 587 aa18.81■□□□□ 0.6
LIMS2-215ENST00000484252 GRIN2CQ14957 1233 aa18.81■□□□□ 0.6
LIMS2-215ENST00000484252 PNCKQ6P2M8 343 aa18.81■□□□□ 0.6
LIMS2-215ENST00000484252 LYSMD2Q8IV50 215 aa18.81■□□□□ 0.6
LIMS2-215ENST00000484252 ZNF514Q96K75 400 aaPredicted RBP18.81■□□□□ 0.6
LIMS2-215ENST00000484252 NLNQ9BYT8 704 aa18.81■□□□□ 0.6
LIMS2-215ENST00000484252 MS4A12Q9NXJ0 267 aa18.81■□□□□ 0.6
LIMS2-215ENST00000484252 ZNF229Q9UJW7 825 aa18.81■□□□□ 0.6
LIMS2-215ENST00000484252 MYOFQ9NZM1 2061 aa18.81■□□□□ 0.6
LIMS2-215ENST00000484252 ZAR1LA6NP61 321 aa18.8■□□□□ 0.6
LIMS2-215ENST00000484252 J3KTA2 159 aa18.8■□□□□ 0.6
LIMS2-215ENST00000484252 PCDH17O14917 1159 aa18.8■□□□□ 0.6
LIMS2-215ENST00000484252 PI15O43692 258 aa18.8■□□□□ 0.6
LIMS2-215ENST00000484252 TLL1O43897 1013 aa18.8■□□□□ 0.6
LIMS2-215ENST00000484252 MOSPD3O75425 235 aa18.8■□□□□ 0.6
LIMS2-215ENST00000484252 PTHP01270 115 aa18.8■□□□□ 0.6
LIMS2-215ENST00000484252 ALDH9A1P49189 494 aa18.8■□□□□ 0.6
LIMS2-215ENST00000484252 PTGES3Q15185 160 aaKnown RBP18.8■□□□□ 0.6
LIMS2-215ENST00000484252 MAPK11Q15759 364 aa18.8■□□□□ 0.6
LIMS2-215ENST00000484252 POM121L1PQ3SYA9 428 aa18.8■□□□□ 0.6
LIMS2-215ENST00000484252 TIMM50Q3ZCQ8 353 aa18.8■□□□□ 0.6
LIMS2-215ENST00000484252 COLEC12Q5KU26 742 aa18.8■□□□□ 0.6
LIMS2-215ENST00000484252 FAM92BQ6ZTR7 304 aa18.8■□□□□ 0.6
LIMS2-215ENST00000484252 ZNF765Q7L2R6 523 aa18.8■□□□□ 0.6
LIMS2-215ENST00000484252 TRAPPC5Q8IUR0 188 aa18.8■□□□□ 0.6
LIMS2-215ENST00000484252 SLC44A2Q8IWA5 706 aaPredicted RBP18.8■□□□□ 0.6
LIMS2-215ENST00000484252 NATD1Q8N6N6 113 aa18.8■□□□□ 0.6
LIMS2-215ENST00000484252 OR5AK3PQ8NH89 298 aa18.8■□□□□ 0.6
LIMS2-215ENST00000484252 ZNF296Q8WUU4 475 aaPredicted RBP18.8■□□□□ 0.6
LIMS2-215ENST00000484252 LINC00615Q96LM1 132 aaPredicted RBP18.8■□□□□ 0.6
LIMS2-215ENST00000484252 C6orf62Q9GZU0 229 aaPredicted RBP18.8■□□□□ 0.6
LIMS2-215ENST00000484252 MTG2Q9H4K7 406 aa18.8■□□□□ 0.6
LIMS2-215ENST00000484252 TRIM39Q9HCM9 518 aa18.8■□□□□ 0.6
LIMS2-215ENST00000484252 MIEF1Q9NQG6 463 aa18.8■□□□□ 0.6
LIMS2-215ENST00000484252 CLN6Q9NWW5 311 aa18.8■□□□□ 0.6
LIMS2-215ENST00000484252 AHSPQ9NZD4 102 aa18.8■□□□□ 0.6
LIMS2-215ENST00000484252 ANKMY1Q9P2S6 941 aa18.8■□□□□ 0.6
LIMS2-215ENST00000484252 RAB23Q9ULC3 237 aa18.8■□□□□ 0.6
LIMS2-215ENST00000484252 C17orf113A0A1B0GUU1 675 aa18.8■□□□□ 0.6
LIMS2-215ENST00000484252 DSCR3O14972 297 aa18.8■□□□□ 0.6
LIMS2-215ENST00000484252 IL3P08700 152 aa18.8■□□□□ 0.6
LIMS2-215ENST00000484252 TPRG1LQ5T0D9 272 aa18.8■□□□□ 0.6
LIMS2-215ENST00000484252 REEP3Q6NUK4 255 aa18.8■□□□□ 0.6
LIMS2-215ENST00000484252 NANOGNBQ7Z5D8 188 aa18.8■□□□□ 0.6
LIMS2-215ENST00000484252 AQP11Q8NBQ7 271 aa18.8■□□□□ 0.6
LIMS2-215ENST00000484252 B3GNT7Q8NFL0 401 aa18.8■□□□□ 0.6
LIMS2-215ENST00000484252 CTRCQ99895 268 aa18.8■□□□□ 0.6
LIMS2-215ENST00000484252 CDADC1Q9BWV3 514 aa18.8■□□□□ 0.6
LIMS2-215ENST00000484252 DPEP2Q9H4A9 486 aa18.8■□□□□ 0.6
LIMS2-215ENST00000484252 ABCB10Q9NRK6 738 aa18.8■□□□□ 0.6
LIMS2-215ENST00000484252 TMEM39AQ9NV64 488 aa18.8■□□□□ 0.6
LIMS2-215ENST00000484252 FTSJ1Q9UET6 329 aa18.8■□□□□ 0.6
LIMS2-215ENST00000484252 KCND3Q9UK17 655 aa18.8■□□□□ 0.6
LIMS2-215ENST00000484252 ITM2BQ9Y287 266 aa18.8■□□□□ 0.6
LIMS2-215ENST00000484252 WBP11Q9Y2W2 641 aaKnown RBP18.8■□□□□ 0.6
LIMS2-215ENST00000484252 IFT52Q9Y366 437 aa18.8■□□□□ 0.6
LIMS2-215ENST00000484252 PEX16Q9Y5Y5 336 aa18.8■□□□□ 0.6
LIMS2-215ENST00000484252 SOD1P00441 154 aa18.79■□□□□ 0.6
LIMS2-215ENST00000484252 CRISP1P54107 249 aa18.79■□□□□ 0.6
LIMS2-215ENST00000484252 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.79■□□□□ 0.6
LIMS2-215ENST00000484252 KRT78Q8N1N4 520 aa18.79■□□□□ 0.6
LIMS2-215ENST00000484252 VN1R2Q8NFZ6 395 aa18.79■□□□□ 0.6
LIMS2-215ENST00000484252 GTPBP3Q969Y2 492 aaKnown RBP18.79■□□□□ 0.6
LIMS2-215ENST00000484252 OR2AG1Q9H205 316 aa18.79■□□□□ 0.6
LIMS2-215ENST00000484252 PCM1Q15154 2024 aa18.79■□□□□ 0.6
LIMS2-215ENST00000484252 LOC100506127A0A0U1RQW1 187 aa18.78■□□□□ 0.6
LIMS2-215ENST00000484252 PIPP12273 146 aaPredicted RBP18.78■□□□□ 0.6
LIMS2-215ENST00000484252 DDX5P17844 614 aaKnown RBP18.78■□□□□ 0.6
LIMS2-215ENST00000484252 GRK5P34947 590 aa18.78■□□□□ 0.6
LIMS2-215ENST00000484252 TMIGD1Q6UXZ0 262 aa18.78■□□□□ 0.6
LIMS2-215ENST00000484252 TRMT11Q7Z4G4 463 aaKnown RBP18.78■□□□□ 0.6
LIMS2-215ENST00000484252 TAGAPQ8N103 731 aa18.78■□□□□ 0.6
LIMS2-215ENST00000484252 WFIKKN2Q8TEU8 576 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms