RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 TRMT6Q9UJA5 497 aaKnown RBP11.92□□□□□ -0.5
UBR4-213ENST00000483922 MMACHCQ9Y4U1 282 aa11.92□□□□□ -0.5
UBR4-213ENST00000483922 ANK3Q12955 4377 aaKnown RBP11.92□□□□□ -0.5
UBR4-213ENST00000483922 NCKAP5O14513 1909 aa11.92□□□□□ -0.5
UBR4-213ENST00000483922 ZANQ9Y493 2812 aa11.92□□□□□ -0.5
UBR4-213ENST00000483922 A0A1W2PPR1 153 aa11.91□□□□□ -0.5
UBR4-213ENST00000483922 FIGNL2A6NMB9 653 aa11.91□□□□□ -0.5
UBR4-213ENST00000483922 KIAA1324LA8MWY0 1029 aaPredicted RBP11.91□□□□□ -0.5
UBR4-213ENST00000483922 CYR61O00622 381 aa11.91□□□□□ -0.5
UBR4-213ENST00000483922 SUSD5O60279 629 aa11.91□□□□□ -0.5
UBR4-213ENST00000483922 GUCA1CO95843 209 aa11.91□□□□□ -0.5
UBR4-213ENST00000483922 FGGP02679 453 aa11.91□□□□□ -0.5
UBR4-213ENST00000483922 MLNP12872 115 aa11.91□□□□□ -0.5
UBR4-213ENST00000483922 HNRNPH1P31943 449 aaKnown RBP11.91□□□□□ -0.5
UBR4-213ENST00000483922 GPS1Q13098 491 aa11.91□□□□□ -0.5
UBR4-213ENST00000483922 SP140Q13342 867 aa11.91□□□□□ -0.5
UBR4-213ENST00000483922 CSHL1Q14406 222 aa11.91□□□□□ -0.5
UBR4-213ENST00000483922 DAZAP2Q15038 168 aaPredicted RBP11.91□□□□□ -0.5
UBR4-213ENST00000483922 SLC25A35Q3KQZ1 300 aa11.91□□□□□ -0.5
UBR4-213ENST00000483922 NDUFAF5Q5TEU4 345 aa11.91□□□□□ -0.5
UBR4-213ENST00000483922 ARMC3Q5W041 872 aa11.91□□□□□ -0.5
UBR4-213ENST00000483922 NIPAL1Q6NVV3 410 aa11.91□□□□□ -0.5
UBR4-213ENST00000483922 NXPE4Q6UWF7 544 aa11.91□□□□□ -0.5
UBR4-213ENST00000483922 PAMR1Q6UXH9 720 aa11.91□□□□□ -0.5
UBR4-213ENST00000483922 WDR53Q7Z5U6 358 aaPredicted RBP11.91□□□□□ -0.5
UBR4-213ENST00000483922 SLC22A16Q86VW1 577 aa11.91□□□□□ -0.5
UBR4-213ENST00000483922 GPALPP1Q8IXQ4 340 aa11.91□□□□□ -0.5
UBR4-213ENST00000483922 FAM109AQ8N4B1 249 aa11.91□□□□□ -0.5
UBR4-213ENST00000483922 C2CD4AQ8NCU7 369 aaPredicted RBP11.91□□□□□ -0.5
UBR4-213ENST00000483922 MYRIPQ8NFW9 859 aa11.91□□□□□ -0.5
UBR4-213ENST00000483922 ASB15Q8WXK1 588 aa11.91□□□□□ -0.5
UBR4-213ENST00000483922 MS4A6EQ96DS6 147 aa11.91□□□□□ -0.5
UBR4-213ENST00000483922 RMND5BQ96G75 393 aaPredicted RBP11.91□□□□□ -0.5
UBR4-213ENST00000483922 CSF3RQ99062 836 aa11.91□□□□□ -0.5
UBR4-213ENST00000483922 FAM173AQ9BQD7 235 aa11.91□□□□□ -0.5
UBR4-213ENST00000483922 PLEKHF2Q9H8W4 249 aa11.91□□□□□ -0.5
UBR4-213ENST00000483922 SH2D2AQ9NP31 389 aa11.91□□□□□ -0.5
UBR4-213ENST00000483922 PRTFDC1Q9NRG1 225 aa11.91□□□□□ -0.5
UBR4-213ENST00000483922 ARL15Q9NXU5 204 aa11.91□□□□□ -0.5
UBR4-213ENST00000483922 ALKBH4Q9NXW9 302 aa11.91□□□□□ -0.5
UBR4-213ENST00000483922 SLC17A6Q9P2U8 582 aa11.91□□□□□ -0.5
UBR4-213ENST00000483922 JMJD1CQ15652 2540 aa11.9□□□□□ -0.5
UBR4-213ENST00000483922 PSMD12O00232 456 aaPredicted RBP11.9□□□□□ -0.5
UBR4-213ENST00000483922 WDR1O75083 606 aa11.9□□□□□ -0.5
UBR4-213ENST00000483922 SERPINA6P08185 405 aa11.9□□□□□ -0.5
UBR4-213ENST00000483922 UQCRC1P31930 480 aa11.9□□□□□ -0.5
UBR4-213ENST00000483922 PIGAP37287 484 aa11.9□□□□□ -0.5
UBR4-213ENST00000483922 MAN2A2P49641 1150 aa11.9□□□□□ -0.5
UBR4-213ENST00000483922 DGKQP52824 942 aa11.9□□□□□ -0.5
UBR4-213ENST00000483922 HSD17B7P56937 341 aa11.9□□□□□ -0.5
UBR4-213ENST00000483922 SLC10A1Q14973 349 aa11.9□□□□□ -0.5
UBR4-213ENST00000483922 RBBP5Q15291 538 aaKnown RBP11.9□□□□□ -0.5
UBR4-213ENST00000483922 PPP1R3AQ16821 1122 aa11.9□□□□□ -0.5
UBR4-213ENST00000483922 DEFB113Q30KQ7 82 aa11.9□□□□□ -0.5
UBR4-213ENST00000483922 C18orf21Q32NC0 220 aaPredicted RBP11.9□□□□□ -0.5
UBR4-213ENST00000483922 RIPPLY2Q5TAB7 128 aa11.9□□□□□ -0.5
UBR4-213ENST00000483922 ADNP2Q6IQ32 1131 aa11.9□□□□□ -0.5
UBR4-213ENST00000483922 SBSNQ6UWP8 590 aa11.9□□□□□ -0.5
UBR4-213ENST00000483922 LYPD8Q6UX82 237 aa11.9□□□□□ -0.5
UBR4-213ENST00000483922 CHSY3Q70JA7 882 aa11.9□□□□□ -0.5
UBR4-213ENST00000483922 VN1R5Q7Z5H4 357 aa11.9□□□□□ -0.5
UBR4-213ENST00000483922 CLNKQ7Z7G1 428 aa11.9□□□□□ -0.5
UBR4-213ENST00000483922 BIVMQ86UB2 503 aa11.9□□□□□ -0.5
UBR4-213ENST00000483922 THOC6Q86W42 341 aaKnown RBP11.9□□□□□ -0.5
UBR4-213ENST00000483922 FAM47BQ8NA70 645 aa11.9□□□□□ -0.5
UBR4-213ENST00000483922 ARMC2Q8NEN0 867 aa11.9□□□□□ -0.5
UBR4-213ENST00000483922 TRPV3Q8NET8 790 aa11.9□□□□□ -0.5
UBR4-213ENST00000483922 TNIP2Q8NFZ5 429 aa11.9□□□□□ -0.5
UBR4-213ENST00000483922 CAPZA3Q96KX2 299 aa11.9□□□□□ -0.5
UBR4-213ENST00000483922 ACAD8Q9UKU7 415 aa11.9□□□□□ -0.5
UBR4-213ENST00000483922 GUCA1BQ9UMX6 200 aa11.9□□□□□ -0.5
UBR4-213ENST00000483922 SLC22A14Q9Y267 594 aa11.9□□□□□ -0.5
UBR4-213ENST00000483922 ATG4BQ9Y4P1 393 aa11.9□□□□□ -0.5
UBR4-213ENST00000483922 LRIT2A6NDA9 550 aa11.89□□□□□ -0.51
UBR4-213ENST00000483922 ACOT7O00154 380 aa11.89□□□□□ -0.51
UBR4-213ENST00000483922 CLDN4O14493 209 aa11.89□□□□□ -0.51
UBR4-213ENST00000483922 PRAMEF4O60810 478 aa11.89□□□□□ -0.51
UBR4-213ENST00000483922 ETHE1O95571 254 aa11.89□□□□□ -0.51
UBR4-213ENST00000483922 KRT14P02533 472 aa11.89□□□□□ -0.51
UBR4-213ENST00000483922 HIST1H2AGP0C0S8 130 aaPredicted RBP11.89□□□□□ -0.51
UBR4-213ENST00000483922 HIST1H2ADP20671 130 aa11.89□□□□□ -0.51
UBR4-213ENST00000483922 RAB38P57729 211 aa11.89□□□□□ -0.51
UBR4-213ENST00000483922 SKP1P63208 163 aa11.89□□□□□ -0.51
UBR4-213ENST00000483922 RNF4P78317 190 aa11.89□□□□□ -0.51
UBR4-213ENST00000483922 CCZ1BP86790 482 aa11.89□□□□□ -0.51
UBR4-213ENST00000483922 CCZ1P86791 482 aaPredicted RBP11.89□□□□□ -0.51
UBR4-213ENST00000483922 SLC13A2Q13183 592 aa11.89□□□□□ -0.51
UBR4-213ENST00000483922 BMPR2Q13873 1038 aa11.89□□□□□ -0.51
UBR4-213ENST00000483922 FLYWCH1Q4VC44 716 aa11.89□□□□□ -0.51
UBR4-213ENST00000483922 PRAMEF9Q5VWM5 478 aa11.89□□□□□ -0.51
UBR4-213ENST00000483922 LRRC8EQ6NSJ5 796 aa11.89□□□□□ -0.51
UBR4-213ENST00000483922 HSDL2Q6YN16 418 aa11.89□□□□□ -0.51
UBR4-213ENST00000483922 RTL4Q6ZR62 310 aa11.89□□□□□ -0.51
UBR4-213ENST00000483922 FAM47EQ6ZV65 393 aa11.89□□□□□ -0.51
UBR4-213ENST00000483922 CAMKMTQ7Z624 323 aa11.89□□□□□ -0.51
UBR4-213ENST00000483922 IGDCC3Q8IVU1 814 aa11.89□□□□□ -0.51
UBR4-213ENST00000483922 LMNTD2Q8IXW0 634 aa11.89□□□□□ -0.51
UBR4-213ENST00000483922 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.89□□□□□ -0.51
UBR4-213ENST00000483922 MYO1HQ8N1T3 1032 aa11.89□□□□□ -0.51
UBR4-213ENST00000483922 NAT8LQ8N9F0 302 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms