RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 HRGP04196 525 aa10.04□□□□□ -0.8
SMARCC1-205ENST00000483847 RFPL3SP0C7P2 107 aa10.04□□□□□ -0.8
SMARCC1-205ENST00000483847 GABRA1P14867 456 aa10.04□□□□□ -0.8
SMARCC1-205ENST00000483847 SCTRP47872 440 aa10.04□□□□□ -0.8
SMARCC1-205ENST00000483847 HK2P52789 917 aa10.04□□□□□ -0.8
SMARCC1-205ENST00000483847 RGS1Q08116 209 aa10.04□□□□□ -0.8
SMARCC1-205ENST00000483847 PHKG1Q16816 387 aa10.04□□□□□ -0.8
SMARCC1-205ENST00000483847 NIPAL1Q6NVV3 410 aa10.04□□□□□ -0.8
SMARCC1-205ENST00000483847 SLC13A5Q86YT5 568 aaPredicted RBP10.04□□□□□ -0.8
SMARCC1-205ENST00000483847 SCUBE1Q8IWY4 988 aa10.04□□□□□ -0.8
SMARCC1-205ENST00000483847 CCDC170Q8IYT3 715 aa10.04□□□□□ -0.8
SMARCC1-205ENST00000483847 ZNF321PQ8N8H1 164 aa10.04□□□□□ -0.8
SMARCC1-205ENST00000483847 CCDC89Q8N998 374 aa10.04□□□□□ -0.8
SMARCC1-205ENST00000483847 ANKRD53Q8N9V6 530 aa10.04□□□□□ -0.8
SMARCC1-205ENST00000483847 KCNJ9Q92806 393 aa10.04□□□□□ -0.8
SMARCC1-205ENST00000483847 SNF8Q96H20 258 aa10.04□□□□□ -0.8
SMARCC1-205ENST00000483847 CALR3Q96L12 384 aaKnown RBP10.04□□□□□ -0.8
SMARCC1-205ENST00000483847 SLC6A15Q9H2J7 730 aa10.04□□□□□ -0.8
SMARCC1-205ENST00000483847 INTS10Q9NVR2 710 aaKnown RBP10.04□□□□□ -0.8
SMARCC1-205ENST00000483847 SAMD15Q9P1V8 674 aa10.04□□□□□ -0.8
SMARCC1-205ENST00000483847 PAK5Q9P286 719 aa10.04□□□□□ -0.8
SMARCC1-205ENST00000483847 ZFP69BQ9UJL9 534 aa10.04□□□□□ -0.8
SMARCC1-205ENST00000483847 ATG4BQ9Y4P1 393 aa10.04□□□□□ -0.8
SMARCC1-205ENST00000483847 MMACHCQ9Y4U1 282 aa10.04□□□□□ -0.8
SMARCC1-205ENST00000483847 EPN1Q9Y6I3 576 aaPredicted RBP10.04□□□□□ -0.8
SMARCC1-205ENST00000483847 ANK3Q12955 4377 aaKnown RBP10.04□□□□□ -0.8
SMARCC1-205ENST00000483847 A0A0G2JN53 185 aa10.03□□□□□ -0.8
SMARCC1-205ENST00000483847 TCRBV7S3A2A0A539 114 aa10.03□□□□□ -0.8
SMARCC1-205ENST00000483847 CTAGE9A4FU28 777 aa10.03□□□□□ -0.8
SMARCC1-205ENST00000483847 TRIM64A6NGJ6 449 aa10.03□□□□□ -0.8
SMARCC1-205ENST00000483847 TRIM64BA6NI03 449 aa10.03□□□□□ -0.8
SMARCC1-205ENST00000483847 BTNL10A8MVZ5 291 aa10.03□□□□□ -0.8
SMARCC1-205ENST00000483847 MIF4GDA9UHW6 222 aaKnown RBP10.03□□□□□ -0.8
SMARCC1-205ENST00000483847 HCN1O60741 890 aa10.03□□□□□ -0.8
SMARCC1-205ENST00000483847 CCND1P24385 295 aa10.03□□□□□ -0.8
SMARCC1-205ENST00000483847 CEACAM8P31997 349 aaPredicted RBP10.03□□□□□ -0.8
SMARCC1-205ENST00000483847 CYLC1P35663 651 aaPredicted RBP10.03□□□□□ -0.8
SMARCC1-205ENST00000483847 PIGAP37287 484 aa10.03□□□□□ -0.8
SMARCC1-205ENST00000483847 ZNF136P52737 540 aa10.03□□□□□ -0.8
SMARCC1-205ENST00000483847 BASP1P80723 227 aaKnown RBP10.03□□□□□ -0.8
SMARCC1-205ENST00000483847 TIAL1Q01085 375 aaKnown RBP eCLIP10.03□□□□□ -0.8
SMARCC1-205ENST00000483847 BMPR2Q13873 1038 aa10.03□□□□□ -0.8
SMARCC1-205ENST00000483847 RUNX2Q13950 521 aa10.03□□□□□ -0.8
SMARCC1-205ENST00000483847 ADGRD1Q6QNK2 874 aa10.03□□□□□ -0.8
SMARCC1-205ENST00000483847 STRA8Q7Z7C7 330 aa10.03□□□□□ -0.8
SMARCC1-205ENST00000483847 CLNKQ7Z7G1 428 aa10.03□□□□□ -0.8
SMARCC1-205ENST00000483847 FBXW8Q8N3Y1 598 aa10.03□□□□□ -0.8
SMARCC1-205ENST00000483847 GOLM1Q8NBJ4 401 aa10.03□□□□□ -0.8
SMARCC1-205ENST00000483847 EEF1AKMT1Q8WVE0 214 aa10.03□□□□□ -0.8
SMARCC1-205ENST00000483847 NEIL2Q969S2 332 aa10.03□□□□□ -0.8
SMARCC1-205ENST00000483847 LRRC46Q96FV0 321 aa10.03□□□□□ -0.8
SMARCC1-205ENST00000483847 Q96MF0 132 aa10.03□□□□□ -0.8
SMARCC1-205ENST00000483847 HAUS8Q9BT25 410 aa10.03□□□□□ -0.8
SMARCC1-205ENST00000483847 ZNF703Q9H7S9 590 aaPredicted RBP10.03□□□□□ -0.8
SMARCC1-205ENST00000483847 CLK4Q9HAZ1 481 aaKnown RBP10.03□□□□□ -0.8
SMARCC1-205ENST00000483847 PARVBQ9HBI1 364 aa10.03□□□□□ -0.8
SMARCC1-205ENST00000483847 PRTFDC1Q9NRG1 225 aa10.03□□□□□ -0.8
SMARCC1-205ENST00000483847 SACM1LQ9NTJ5 587 aa10.03□□□□□ -0.8
SMARCC1-205ENST00000483847 MTRF1LQ9UGC7 380 aaKnown RBP10.03□□□□□ -0.8
SMARCC1-205ENST00000483847 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.03□□□□□ -0.8
SMARCC1-205ENST00000483847 ARID1AO14497 2285 aa10.02□□□□□ -0.81
SMARCC1-205ENST00000483847 CLDN4O14493 209 aa10.02□□□□□ -0.81
SMARCC1-205ENST00000483847 ARHGEF9O43307 516 aa10.02□□□□□ -0.81
SMARCC1-205ENST00000483847 P04436 131 aa10.02□□□□□ -0.81
SMARCC1-205ENST00000483847 AHRP35869 848 aa10.02□□□□□ -0.81
SMARCC1-205ENST00000483847 SLC1A2P43004 574 aa10.02□□□□□ -0.81
SMARCC1-205ENST00000483847 TRPC1P48995 793 aa10.02□□□□□ -0.81
SMARCC1-205ENST00000483847 AGFG1P52594 562 aaKnown RBP10.02□□□□□ -0.81
SMARCC1-205ENST00000483847 TERF1P54274 439 aa10.02□□□□□ -0.81
SMARCC1-205ENST00000483847 BTN3A2P78410 334 aa10.02□□□□□ -0.81
SMARCC1-205ENST00000483847 DHX9Q08211 1270 aaKnown RBP10.02□□□□□ -0.81
SMARCC1-205ENST00000483847 SLC13A2Q13183 592 aa10.02□□□□□ -0.81
SMARCC1-205ENST00000483847 ACSF3Q4G176 576 aaPredicted RBP10.02□□□□□ -0.81
SMARCC1-205ENST00000483847 TOR1AIP1Q5JTV8 583 aa10.02□□□□□ -0.81
SMARCC1-205ENST00000483847 HSDL2Q6YN16 418 aa10.02□□□□□ -0.81
SMARCC1-205ENST00000483847 P3H2Q8IVL5 708 aa10.02□□□□□ -0.81
SMARCC1-205ENST00000483847 FAM47BQ8NA70 645 aa10.02□□□□□ -0.81
SMARCC1-205ENST00000483847 OR56A3Q8NH54 315 aa10.02□□□□□ -0.81
SMARCC1-205ENST00000483847 ZNF592Q92610 1267 aa10.02□□□□□ -0.81
SMARCC1-205ENST00000483847 HES6Q96HZ4 224 aa10.02□□□□□ -0.81
SMARCC1-205ENST00000483847 TSNARE1Q96NA8 513 aa10.02□□□□□ -0.81
SMARCC1-205ENST00000483847 YIPF4Q9BSR8 244 aa10.02□□□□□ -0.81
SMARCC1-205ENST00000483847 CCDC68Q9H2F9 335 aa10.02□□□□□ -0.81
SMARCC1-205ENST00000483847 EPB41L4BQ9H329 900 aa10.02□□□□□ -0.81
SMARCC1-205ENST00000483847 ADAP2Q9NPF8 381 aa10.02□□□□□ -0.81
SMARCC1-205ENST00000483847 ZNF629Q9UEG4 869 aaPredicted RBP10.02□□□□□ -0.81
SMARCC1-205ENST00000483847 FOXD3Q9UJU5 478 aaPredicted RBP10.02□□□□□ -0.81
SMARCC1-205ENST00000483847 SONP18583 2426 aaKnown RBP10.02□□□□□ -0.81
SMARCC1-205ENST00000483847 LRRC3CA6NJW4 275 aa10.01□□□□□ -0.81
SMARCC1-205ENST00000483847 EIF3FO00303 357 aaPredicted RBP10.01□□□□□ -0.81
SMARCC1-205ENST00000483847 NRDCO43847 1150 aa10.01□□□□□ -0.81
SMARCC1-205ENST00000483847 HAUS5O94927 633 aa10.01□□□□□ -0.81
SMARCC1-205ENST00000483847 EPPINO95925 133 aa10.01□□□□□ -0.81
SMARCC1-205ENST00000483847 C8GP07360 202 aa10.01□□□□□ -0.81
SMARCC1-205ENST00000483847 HSD17B7P56937 341 aa10.01□□□□□ -0.81
SMARCC1-205ENST00000483847 RNF4P78317 190 aa10.01□□□□□ -0.81
SMARCC1-205ENST00000483847 CCZ1BP86790 482 aa10.01□□□□□ -0.81
SMARCC1-205ENST00000483847 CCZ1P86791 482 aaPredicted RBP10.01□□□□□ -0.81
SMARCC1-205ENST00000483847 PPP2R2BQ00005 443 aa10.01□□□□□ -0.81
SMARCC1-205ENST00000483847 REEP5Q00765 189 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms