RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 TM9SF3Q9HD45 589 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 POT1Q9NUX5 634 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 RAPGEFL1Q9UHV5 662 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 ACSL6Q9UKU0 697 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 MAGED1Q9Y5V3 778 aaPredicted RBP12.59□□□□□ -0.39
CPNE1-225ENST00000483495 NUP214P35658 2090 aaPredicted RBP12.59□□□□□ -0.39
CPNE1-225ENST00000483495 EYSQ5T1H1 3165 aa12.58□□□□□ -0.4
CPNE1-225ENST00000483495 A0A1W2PPC4 97 aa12.58□□□□□ -0.4
CPNE1-225ENST00000483495 OR2A25A4D2G3 310 aa12.58□□□□□ -0.4
CPNE1-225ENST00000483495 H3BNH8 94 aa12.58□□□□□ -0.4
CPNE1-225ENST00000483495 GNGT2O14610 69 aa12.58□□□□□ -0.4
CPNE1-225ENST00000483495 ERI3O43414 337 aaKnown RBP12.58□□□□□ -0.4
CPNE1-225ENST00000483495 NOBOXO60393 691 aa12.58□□□□□ -0.4
CPNE1-225ENST00000483495 ZNF217O75362 1048 aa12.58□□□□□ -0.4
CPNE1-225ENST00000483495 CHI3L1P36222 383 aaPredicted RBP12.58□□□□□ -0.4
CPNE1-225ENST00000483495 ALDH9A1P49189 494 aa12.58□□□□□ -0.4
CPNE1-225ENST00000483495 IST1P53990 364 aa12.58□□□□□ -0.4
CPNE1-225ENST00000483495 RPS15AP62244 130 aaKnown RBP12.58□□□□□ -0.4
CPNE1-225ENST00000483495 UBE2IP63279 158 aaKnown RBP12.58□□□□□ -0.4
CPNE1-225ENST00000483495 FZD5Q13467 585 aa12.58□□□□□ -0.4
CPNE1-225ENST00000483495 FZD2Q14332 565 aa12.58□□□□□ -0.4
CPNE1-225ENST00000483495 SLC9A5Q14940 896 aa12.58□□□□□ -0.4
CPNE1-225ENST00000483495 CCDC85BQ15834 202 aaPredicted RBP12.58□□□□□ -0.4
CPNE1-225ENST00000483495 ZNF630Q2M218 657 aaPredicted RBP12.58□□□□□ -0.4
CPNE1-225ENST00000483495 IQCCQ4KMZ1 466 aa12.58□□□□□ -0.4
CPNE1-225ENST00000483495 PRRT3Q5FWE3 981 aa12.58□□□□□ -0.4
CPNE1-225ENST00000483495 SAXO2Q658L1 398 aa12.58□□□□□ -0.4
CPNE1-225ENST00000483495 ANGPTL8Q6UXH0 198 aa12.58□□□□□ -0.4
CPNE1-225ENST00000483495 GALNT10Q86SR1 603 aa12.58□□□□□ -0.4
CPNE1-225ENST00000483495 HIPK1Q86Z02 1210 aa12.58□□□□□ -0.4
CPNE1-225ENST00000483495 TSTD1Q8NFU3 115 aa12.58□□□□□ -0.4
CPNE1-225ENST00000483495 ZBED6CLQ96FA7 236 aaPredicted RBP12.58□□□□□ -0.4
CPNE1-225ENST00000483495 OR2A14Q96R47 310 aa12.58□□□□□ -0.4
CPNE1-225ENST00000483495 RBM4BQ9BQ04 359 aaKnown RBP12.58□□□□□ -0.4
CPNE1-225ENST00000483495 RBM4Q9BWF3 364 aaKnown RBP12.58□□□□□ -0.4
CPNE1-225ENST00000483495 FAIM2Q9BWQ8 316 aa12.58□□□□□ -0.4
CPNE1-225ENST00000483495 NLNQ9BYT8 704 aa12.58□□□□□ -0.4
CPNE1-225ENST00000483495 SIRT3Q9NTG7 399 aaPredicted RBP12.58□□□□□ -0.4
CPNE1-225ENST00000483495 ADPRHL2Q9NX46 363 aa12.58□□□□□ -0.4
CPNE1-225ENST00000483495 ASB4Q9Y574 426 aa12.58□□□□□ -0.4
CPNE1-225ENST00000483495 KLK4Q9Y5K2 254 aa12.58□□□□□ -0.4
CPNE1-225ENST00000483495 TRBV23OR9-2A0A075B6M9 112 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 FAM221BA6H8Z2 402 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 OR5K4A6NMS3 321 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 FABP3P05413 133 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 ARAFP10398 606 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 THRBP10828 461 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 ATP5A1P25705 553 aaKnown RBP12.57□□□□□ -0.4
CPNE1-225ENST00000483495 MANFP55145 182 aaKnown RBP12.57□□□□□ -0.4
CPNE1-225ENST00000483495 STXBP1P61764 594 aaKnown RBP12.57□□□□□ -0.4
CPNE1-225ENST00000483495 KCNJ10P78508 379 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 VLDLRP98155 873 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 GPR18Q14330 331 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 TOR1AIP1Q5JTV8 583 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 NDUFAF5Q5TEU4 345 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 RNF220Q5VTB9 566 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 FOXB2Q5VYV0 432 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 OR2T5Q6IEZ7 315 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 SHQ1Q6PI26 577 aaKnown RBP12.57□□□□□ -0.4
CPNE1-225ENST00000483495 VN1R4Q7Z5H5 301 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 VTCN1Q7Z7D3 282 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 TMEM179BQ7Z7N9 219 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 PATL1Q86TB9 770 aaKnown RBP12.57□□□□□ -0.4
CPNE1-225ENST00000483495 SLC30A8Q8IWU4 369 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 ACOT4Q8N9L9 421 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 OR2T29Q8NH02 315 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 OR5AK3PQ8NH89 298 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 NT5CQ8TCD5 201 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 CYGBQ8WWM9 190 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 C7orf34Q96L11 122 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 TRAPPC9Q96Q05 1148 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 DOHHQ9BU89 302 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 GABARAPL1Q9H0R8 117 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 TCEAL2Q9H3H9 227 aaPredicted RBP12.57□□□□□ -0.4
CPNE1-225ENST00000483495 IFT80Q9P2H3 777 aaPredicted RBP12.57□□□□□ -0.4
CPNE1-225ENST00000483495 ANKMY1Q9P2S6 941 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 APOBEC3BQ9UH17 382 aaKnown RBP12.57□□□□□ -0.4
CPNE1-225ENST00000483495 ABCG2Q9UNQ0 655 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 MYRFQ9Y2G1 1151 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 KLHL20Q9Y2M5 609 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 MAP4K5Q9Y4K4 846 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 IGHV1OR15-9A0A0B4J2B8 117 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 KIR2DS5A0A0G2JLQ3 304 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 A0A0G2JN53 185 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 A0A0G2JNG1 304 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 TRIM64A6NGJ6 449 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 KIR2DS3K7RE56 304 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 ZW10O43264 779 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 SUV39H1O43463 412 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 GUCY1B2O75343 617 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 ALBP02768 609 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 TFAP2AP05549 437 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 THEGLP0DJG4 465 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 SOAT1P35610 550 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 PRIM2P49643 509 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 PCBP3P57721 371 aaKnown RBP12.57□□□□□ -0.4
CPNE1-225ENST00000483495 SELENOWP63302 87 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 RELAQ04206 551 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 EPS8Q12929 822 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 SLAMF1Q13291 335 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms