RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 TIMMDC1Q9NPL8 285 aa12.92□□□□□ -0.34
VARS-226ENST00000483275 PLSCR2Q9NRY7 297 aa12.92□□□□□ -0.34
VARS-226ENST00000483275 HPF1Q9NWY4 346 aa12.92□□□□□ -0.34
VARS-226ENST00000483275 MMACHCQ9Y4U1 282 aa12.92□□□□□ -0.34
VARS-226ENST00000483275 KCNE2Q9Y6J6 123 aa12.92□□□□□ -0.34
VARS-226ENST00000483275 URADA6NGE7 173 aa12.91□□□□□ -0.34
VARS-226ENST00000483275 PRAMEF4O60810 478 aa12.91□□□□□ -0.34
VARS-226ENST00000483275 SH3BGRLO75368 114 aa12.91□□□□□ -0.34
VARS-226ENST00000483275 TBX6O95947 436 aaPredicted RBP12.91□□□□□ -0.34
VARS-226ENST00000483275 IFNA16P05015 189 aa12.91□□□□□ -0.34
VARS-226ENST00000483275 GPR143P51810 404 aa12.91□□□□□ -0.34
VARS-226ENST00000483275 RAB38P57729 211 aa12.91□□□□□ -0.34
VARS-226ENST00000483275 TAS2R39P59534 338 aa12.91□□□□□ -0.34
VARS-226ENST00000483275 BMPR2Q13873 1038 aa12.91□□□□□ -0.34
VARS-226ENST00000483275 FASTKD3Q14CZ7 662 aaKnown RBP12.91□□□□□ -0.34
VARS-226ENST00000483275 PRAMEF9Q5VWM5 478 aa12.91□□□□□ -0.34
VARS-226ENST00000483275 NIPAL1Q6NVV3 410 aa12.91□□□□□ -0.34
VARS-226ENST00000483275 ZNF585AQ6P3V2 769 aa12.91□□□□□ -0.34
VARS-226ENST00000483275 FRA10AC1Q70Z53 315 aa12.91□□□□□ -0.34
VARS-226ENST00000483275 SLC35F6Q8N357 371 aa12.91□□□□□ -0.34
VARS-226ENST00000483275 ASB5Q8WWX0 329 aa12.91□□□□□ -0.34
VARS-226ENST00000483275 SLCO2A1Q92959 643 aa12.91□□□□□ -0.34
VARS-226ENST00000483275 RASL10BQ96S79 203 aa12.91□□□□□ -0.34
VARS-226ENST00000483275 TTTY12Q9BZ98 90 aa12.91□□□□□ -0.34
VARS-226ENST00000483275 OR8D2Q9GZM6 311 aa12.91□□□□□ -0.34
VARS-226ENST00000483275 ADAP2Q9NPF8 381 aa12.91□□□□□ -0.34
VARS-226ENST00000483275 KCNJ16Q9NPI9 418 aa12.91□□□□□ -0.34
VARS-226ENST00000483275 JRKLQ9Y4A0 524 aa12.91□□□□□ -0.34
VARS-226ENST00000483275 GOLGA6L10A0A0M3HER8 536 aa12.9□□□□□ -0.34
VARS-226ENST00000483275 FAM95CA0A1B0GW59 222 aa12.9□□□□□ -0.34
VARS-226ENST00000483275 LRIT2A6NDA9 550 aa12.9□□□□□ -0.34
VARS-226ENST00000483275 B3GALT2O43825 422 aa12.9□□□□□ -0.34
VARS-226ENST00000483275 ZFAND5O76080 213 aa12.9□□□□□ -0.34
VARS-226ENST00000483275 C1GALT1C1LP0DN25 315 aa12.9□□□□□ -0.34
VARS-226ENST00000483275 GMPRP36959 345 aa12.9□□□□□ -0.34
VARS-226ENST00000483275 MAGEA5P43359 124 aa12.9□□□□□ -0.34
VARS-226ENST00000483275 SLC6A12P48065 614 aa12.9□□□□□ -0.34
VARS-226ENST00000483275 DNASE1L1P49184 302 aa12.9□□□□□ -0.34
VARS-226ENST00000483275 HK2P52789 917 aa12.9□□□□□ -0.34
VARS-226ENST00000483275 STXBP1P61764 594 aaKnown RBP12.9□□□□□ -0.34
VARS-226ENST00000483275 MYBPHQ13203 477 aa12.9□□□□□ -0.34
VARS-226ENST00000483275 TERF2Q15554 542 aa12.9□□□□□ -0.34
VARS-226ENST00000483275 STEAP4Q687X5 459 aa12.9□□□□□ -0.34
VARS-226ENST00000483275 TMEM211Q6ICI0 200 aa12.9□□□□□ -0.34
VARS-226ENST00000483275 TMIGD1Q6UXZ0 262 aa12.9□□□□□ -0.34
VARS-226ENST00000483275 CAPN12Q6ZSI9 719 aa12.9□□□□□ -0.34
VARS-226ENST00000483275 GALNT7Q86SF2 657 aa12.9□□□□□ -0.34
VARS-226ENST00000483275 ZC3HC1Q86WB0 502 aaKnown RBP12.9□□□□□ -0.34
VARS-226ENST00000483275 DMRTC2Q8IXT2 367 aaPredicted RBP12.9□□□□□ -0.34
VARS-226ENST00000483275 OR10Q1Q8NGQ4 319 aa12.9□□□□□ -0.34
VARS-226ENST00000483275 GABPB2Q8TAK5 448 aaPredicted RBP12.9□□□□□ -0.34
VARS-226ENST00000483275 DOK4Q8TEW6 326 aa12.9□□□□□ -0.34
VARS-226ENST00000483275 ESAMQ96AP7 390 aa12.9□□□□□ -0.34
VARS-226ENST00000483275 SCYL1Q96KG9 808 aa12.9□□□□□ -0.34
VARS-226ENST00000483275 CAPZA3Q96KX2 299 aa12.9□□□□□ -0.34
VARS-226ENST00000483275 SMC6Q96SB8 1091 aa12.9□□□□□ -0.34
VARS-226ENST00000483275 NAP1L3Q99457 506 aaPredicted RBP12.9□□□□□ -0.34
VARS-226ENST00000483275 ZNF559Q9BR84 538 aa12.9□□□□□ -0.34
VARS-226ENST00000483275 TMEM79Q9BSE2 394 aa12.9□□□□□ -0.34
VARS-226ENST00000483275 CNPPD1Q9BV87 410 aa12.9□□□□□ -0.34
VARS-226ENST00000483275 SEMA4BQ9NPR2 832 aaPredicted RBP12.9□□□□□ -0.34
VARS-226ENST00000483275 TRMT1Q9NXH9 659 aaKnown RBP12.9□□□□□ -0.34
VARS-226ENST00000483275 PPIEQ9UNP9 301 aaKnown RBP12.9□□□□□ -0.34
VARS-226ENST00000483275 YARS2Q9Y2Z4 477 aaKnown RBP12.9□□□□□ -0.34
VARS-226ENST00000483275 OARD1Q9Y530 152 aa12.9□□□□□ -0.34
VARS-226ENST00000483275 FAM215AQ9Y5M1 114 aa12.9□□□□□ -0.34
VARS-226ENST00000483275 NINQ8N4C6 2090 aa12.9□□□□□ -0.34
VARS-226ENST00000483275 ABCA4P78363 2273 aa12.9□□□□□ -0.35
VARS-226ENST00000483275 KIAA1549Q9HCM3 1950 aa12.89□□□□□ -0.35
VARS-226ENST00000483275 ATP6AP2A0A1C7CYW4 349 aa12.89□□□□□ -0.35
VARS-226ENST00000483275 ACOT7O00154 380 aa12.89□□□□□ -0.35
VARS-226ENST00000483275 CYR61O00622 381 aa12.89□□□□□ -0.35
VARS-226ENST00000483275 LDB3O75112 727 aa12.89□□□□□ -0.35
VARS-226ENST00000483275 ATP6AP2O75787 350 aa12.89□□□□□ -0.35
VARS-226ENST00000483275 LRATO95237 230 aa12.89□□□□□ -0.35
VARS-226ENST00000483275 NADKO95544 446 aaPredicted RBP12.89□□□□□ -0.35
VARS-226ENST00000483275 CCL3P10147 92 aa12.89□□□□□ -0.35
VARS-226ENST00000483275 GNAZP19086 355 aa12.89□□□□□ -0.35
VARS-226ENST00000483275 IVDP26440 423 aa12.89□□□□□ -0.35
VARS-226ENST00000483275 LIM2P55344 173 aa12.89□□□□□ -0.35
VARS-226ENST00000483275 HSD17B7P56937 341 aa12.89□□□□□ -0.35
VARS-226ENST00000483275 GXYLT1Q4G148 440 aa12.89□□□□□ -0.35
VARS-226ENST00000483275 RTL6Q6ICC9 239 aa12.89□□□□□ -0.35
VARS-226ENST00000483275 LIX1LQ8IVB5 337 aa12.89□□□□□ -0.35
VARS-226ENST00000483275 TMEM251Q8N6I4 163 aa12.89□□□□□ -0.35
VARS-226ENST00000483275 SNX31Q8N9S9 440 aa12.89□□□□□ -0.35
VARS-226ENST00000483275 ACTRT1Q8TDG2 376 aa12.89□□□□□ -0.35
VARS-226ENST00000483275 PTPMT1Q8WUK0 201 aaPredicted RBP12.89□□□□□ -0.35
VARS-226ENST00000483275 RHBDF1Q96CC6 855 aa12.89□□□□□ -0.35
VARS-226ENST00000483275 PDLIM5Q96HC4 596 aaKnown RBP12.89□□□□□ -0.35
VARS-226ENST00000483275 F2RL3Q96RI0 385 aa12.89□□□□□ -0.35
VARS-226ENST00000483275 NAT9Q9BTE0 207 aa12.89□□□□□ -0.35
VARS-226ENST00000483275 REXO4Q9GZR2 422 aaKnown RBP12.89□□□□□ -0.35
VARS-226ENST00000483275 ZDHHC11Q9H8X9 412 aa12.89□□□□□ -0.35
VARS-226ENST00000483275 COPS7BQ9H9Q2 264 aaPredicted RBP12.89□□□□□ -0.35
VARS-226ENST00000483275 CAB39LQ9H9S4 337 aa12.89□□□□□ -0.35
VARS-226ENST00000483275 CLK4Q9HAZ1 481 aaKnown RBP12.89□□□□□ -0.35
VARS-226ENST00000483275 MYOTQ9UBF9 498 aa12.89□□□□□ -0.35
VARS-226ENST00000483275 CTNNAL1Q9UBT7 734 aa12.89□□□□□ -0.35
VARS-226ENST00000483275 CORO1CQ9ULV4 474 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms