RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 TMEM98Q9Y2Y6 226 aa12.18□□□□□ -0.46
VPS52-218ENST00000482399 TRBV5-3A0A0A0MS03 114 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 RFXAPO00287 272 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 NR2F6P10588 404 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 ASMTP46597 345 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 PRKCDQ05655 676 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 PIN1Q13526 163 aaPredicted RBP12.17□□□□□ -0.46
VPS52-218ENST00000482399 DUSP7Q16829 419 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 CCDC58Q4VC31 144 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 FRMPD2BQ6IN97 320 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 DPY19L3Q6ZPD9 716 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 DNAJB7Q7Z6W7 309 aaPredicted RBP12.17□□□□□ -0.46
VPS52-218ENST00000482399 LACC1Q8IV20 430 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 OR7G3Q8NG95 312 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 OR2AP1Q8NGE2 309 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 CRELD1Q96HD1 420 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 SCLYQ96I15 445 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 CEP295NLQ96MC4 621 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 RIOK2Q9BVS4 552 aaKnown RBP12.17□□□□□ -0.46
VPS52-218ENST00000482399 SUV39H2Q9H5I1 410 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 STARD7Q9NQZ5 370 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 TRBV4-1A0A0J9YWV2 114 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 SEPT4O43236 478 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 NR2F1P10589 423 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 SLC2A2P11168 524 aaPredicted RBP12.17□□□□□ -0.46
VPS52-218ENST00000482399 MAGEA2P43356 314 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 DBPQ10586 325 aaPredicted RBP12.17□□□□□ -0.46
VPS52-218ENST00000482399 BTBD16Q32M84 506 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 DDI2Q5TDH0 399 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 LYPLAL1Q5VWZ2 237 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 PLAG1Q6DJT9 500 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 MED27Q6P2C8 311 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 RNF180Q86T96 592 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 FAM124AQ86V42 546 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 RBM45Q8IUH3 476 aaKnown RBP12.17□□□□□ -0.46
VPS52-218ENST00000482399 GEMIN6Q8WXD5 167 aaKnown RBP12.17□□□□□ -0.46
VPS52-218ENST00000482399 SLC9A6Q92581 669 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 TRIM63Q969Q1 353 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 TMEM169Q96HH4 297 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 IL17FQ96PD4 163 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 ANKHQ9HCJ1 492 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 EQTNQ9NQ60 294 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 MAN2B2Q9Y2E5 1009 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 CMAHPQ9Y471 501 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 SDK1Q7Z5N4 2213 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 GLOD5A6NK44 160 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 H3BNC9 293 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 F11P03951 625 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 PPIBP23284 216 aaKnown RBP12.17□□□□□ -0.46
VPS52-218ENST00000482399 APEX1P27695 318 aaKnown RBP12.17□□□□□ -0.46
VPS52-218ENST00000482399 HOXC5Q00444 222 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 CNTN1Q12860 1018 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 KIAA1161Q6NSJ0 714 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 TMEM220Q6QAJ8 160 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 ZNF367Q7RTV3 350 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 ELMOD2Q8IZ81 293 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 CHST14Q8NCH0 376 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 ZNF740Q8NDX6 193 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 FAM46DQ8NEK8 389 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 SNAPC3Q92966 411 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 PIP5K1AQ99755 562 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 TMEM245Q9H330 911 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 TMEM45AQ9NWC5 275 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 NKIRAS2Q9NYR9 191 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 CORO2BQ9UQ03 480 aa12.17□□□□□ -0.46
VPS52-218ENST00000482399 C12orf71A8MTZ7 269 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 NEDD8-MDP1E9PL57 170 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 NCR1O76036 304 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 CD160O95971 181 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 RFX3P48380 749 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 PRKCZQ05513 592 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 CDC20Q12834 499 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 LMAN2Q12907 356 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 ZSWIM7Q19AV6 140 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 WSCD2Q2TBF2 565 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 MACC1Q6ZN28 852 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 TPRG1Q6ZUI0 275 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 ZNF438Q7Z4V0 828 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 OR6F1Q8NGZ6 308 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 WDR48Q8TAF3 677 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 SOCS4Q8WXH5 440 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 MRPS31Q92665 395 aaKnown RBP12.16□□□□□ -0.46
VPS52-218ENST00000482399 C7orf34Q96L11 122 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 EPYCQ99645 322 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 FNDC11Q9BVV2 318 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 SLC12A9Q9BXP2 914 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 UCK2Q9BZX2 261 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 C11orf54Q9H0W9 315 aaPredicted RBP12.16□□□□□ -0.46
VPS52-218ENST00000482399 CAPN10Q9HC96 672 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 ARHGEF33A8MVX0 844 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 SCAMP1O15126 338 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 EOMESO95936 686 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 PDHA2P29803 388 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 GZMMP51124 257 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.16□□□□□ -0.46
VPS52-218ENST00000482399 HEPACAMQ14CZ8 416 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 NLRP8Q86W28 1048 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 DENND6BQ8NEG7 585 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 FATE1Q969F0 183 aa12.16□□□□□ -0.46
VPS52-218ENST00000482399 NEIL2Q969S2 332 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms