RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 PRDM7Q9NQW5 492 aa12.55□□□□□ -0.4
CTDSP1-208ENST00000482272 PTBP2Q9UKA9 531 aaKnown RBP12.55□□□□□ -0.4
CTDSP1-208ENST00000482272 DAPP1Q9UN19 280 aa12.55□□□□□ -0.4
CTDSP1-208ENST00000482272 PPIEQ9UNP9 301 aaKnown RBP12.55□□□□□ -0.4
CTDSP1-208ENST00000482272 SVILO95425 2214 aa12.55□□□□□ -0.4
CTDSP1-208ENST00000482272 CTNSO60931 367 aa12.54□□□□□ -0.4
CTDSP1-208ENST00000482272 ZFAND5O76080 213 aa12.54□□□□□ -0.4
CTDSP1-208ENST00000482272 IFNA16P05015 189 aa12.54□□□□□ -0.4
CTDSP1-208ENST00000482272 AGAP20933 346 aa12.54□□□□□ -0.4
CTDSP1-208ENST00000482272 HTR1EP28566 365 aa12.54□□□□□ -0.4
CTDSP1-208ENST00000482272 LIM2P55344 173 aa12.54□□□□□ -0.4
CTDSP1-208ENST00000482272 STX4Q12846 297 aa12.54□□□□□ -0.4
CTDSP1-208ENST00000482272 CHIT1Q13231 466 aa12.54□□□□□ -0.4
CTDSP1-208ENST00000482272 BMPR2Q13873 1038 aa12.54□□□□□ -0.4
CTDSP1-208ENST00000482272 ZKSCAN8Q15776 578 aaPredicted RBP12.54□□□□□ -0.4
CTDSP1-208ENST00000482272 TBCCQ15814 346 aa12.54□□□□□ -0.4
CTDSP1-208ENST00000482272 ZNF630Q2M218 657 aaPredicted RBP12.54□□□□□ -0.4
CTDSP1-208ENST00000482272 TBC1D1Q86TI0 1168 aaPredicted RBP12.54□□□□□ -0.4
CTDSP1-208ENST00000482272 ZNF227Q86WZ6 799 aa12.54□□□□□ -0.4
CTDSP1-208ENST00000482272 SIAH3Q8IW03 269 aa12.54□□□□□ -0.4
CTDSP1-208ENST00000482272 SULF2Q8IWU5 870 aa12.54□□□□□ -0.4
CTDSP1-208ENST00000482272 SRRM1Q8IYB3 904 aaKnown RBP12.54□□□□□ -0.4
CTDSP1-208ENST00000482272 EID3Q8N140 333 aa12.54□□□□□ -0.4
CTDSP1-208ENST00000482272 PPM1NQ8N819 430 aa12.54□□□□□ -0.4
CTDSP1-208ENST00000482272 DAZLQ92904 295 aaKnown RBP12.54□□□□□ -0.4
CTDSP1-208ENST00000482272 EXT2Q93063 718 aa12.54□□□□□ -0.4
CTDSP1-208ENST00000482272 NCLNQ969V3 563 aa12.54□□□□□ -0.4
CTDSP1-208ENST00000482272 F2RL3Q96RI0 385 aa12.54□□□□□ -0.4
CTDSP1-208ENST00000482272 PHACTR1Q9C0D0 580 aa12.54□□□□□ -0.4
CTDSP1-208ENST00000482272 NMRAL1Q9HBL8 299 aa12.54□□□□□ -0.4
CTDSP1-208ENST00000482272 ADAP2Q9NPF8 381 aa12.54□□□□□ -0.4
CTDSP1-208ENST00000482272 TINAGQ9UJW2 476 aa12.54□□□□□ -0.4
CTDSP1-208ENST00000482272 YARS2Q9Y2Z4 477 aaKnown RBP12.54□□□□□ -0.4
CTDSP1-208ENST00000482272 MEMO1Q9Y316 297 aa12.54□□□□□ -0.4
CTDSP1-208ENST00000482272 CLCA3PQ9Y6N3 262 aa12.54□□□□□ -0.4
CTDSP1-208ENST00000482272 SPACA6W5XKT8 324 aa12.54□□□□□ -0.4
CTDSP1-208ENST00000482272 TEX15Q9BXT5 2789 aa12.54□□□□□ -0.4
CTDSP1-208ENST00000482272 CRYBG3Q68DQ2 2970 aa12.54□□□□□ -0.4
CTDSP1-208ENST00000482272 CELSR2Q9HCU4 2923 aa12.53□□□□□ -0.4
CTDSP1-208ENST00000482272 CYR61O00622 381 aa12.53□□□□□ -0.4
CTDSP1-208ENST00000482272 PRRG2O14669 202 aa12.53□□□□□ -0.4
CTDSP1-208ENST00000482272 ZNHIT1O43257 154 aa12.53□□□□□ -0.4
CTDSP1-208ENST00000482272 PEX1O43933 1283 aa12.53□□□□□ -0.4
CTDSP1-208ENST00000482272 ITGA10O75578 1167 aa12.53□□□□□ -0.4
CTDSP1-208ENST00000482272 TNNI3P19429 210 aa12.53□□□□□ -0.4
CTDSP1-208ENST00000482272 CERS1P27544 350 aa12.53□□□□□ -0.4
CTDSP1-208ENST00000482272 CRABP2P29373 138 aa12.53□□□□□ -0.4
CTDSP1-208ENST00000482272 PPP2R1BP30154 601 aa12.53□□□□□ -0.4
CTDSP1-208ENST00000482272 STX2P32856 288 aa12.53□□□□□ -0.4
CTDSP1-208ENST00000482272 CASP2P42575 452 aa12.53□□□□□ -0.4
CTDSP1-208ENST00000482272 MSH2P43246 934 aa12.53□□□□□ -0.4
CTDSP1-208ENST00000482272 MAGEA4P43358 317 aa12.53□□□□□ -0.4
CTDSP1-208ENST00000482272 MEOX1P50221 254 aa12.53□□□□□ -0.4
CTDSP1-208ENST00000482272 SSR4P51571 173 aa12.53□□□□□ -0.4
CTDSP1-208ENST00000482272 GPR143P51810 404 aa12.53□□□□□ -0.4
CTDSP1-208ENST00000482272 ELAVL1Q15717 326 aaKnown RBP12.53□□□□□ -0.4
CTDSP1-208ENST00000482272 AP5B1Q2VPB7 878 aa12.53□□□□□ -0.4
CTDSP1-208ENST00000482272 KBTBD12Q3ZCT8 623 aa12.53□□□□□ -0.4
CTDSP1-208ENST00000482272 CHSY3Q70JA7 882 aa12.53□□□□□ -0.4
CTDSP1-208ENST00000482272 LRRC70Q7Z2Q7 622 aa12.53□□□□□ -0.4
CTDSP1-208ENST00000482272 CLNKQ7Z7G1 428 aa12.53□□□□□ -0.4
CTDSP1-208ENST00000482272 CMC1Q7Z7K0 106 aa12.53□□□□□ -0.4
CTDSP1-208ENST00000482272 ISCA2Q86U28 154 aa12.53□□□□□ -0.4
CTDSP1-208ENST00000482272 CCDC25Q86WR0 208 aa12.53□□□□□ -0.4
CTDSP1-208ENST00000482272 CYP4Z2PQ8N1L4 340 aa12.53□□□□□ -0.4
CTDSP1-208ENST00000482272 FAM47BQ8NA70 645 aa12.53□□□□□ -0.4
CTDSP1-208ENST00000482272 MORN4Q8NDC4 146 aa12.53□□□□□ -0.4
CTDSP1-208ENST00000482272 FBXO25Q8TCJ0 367 aa12.53□□□□□ -0.4
CTDSP1-208ENST00000482272 KCNC2Q96PR1 638 aa12.53□□□□□ -0.4
CTDSP1-208ENST00000482272 TBCDQ9BTW9 1192 aa12.53□□□□□ -0.4
CTDSP1-208ENST00000482272 ALOXE3Q9BYJ1 711 aa12.53□□□□□ -0.4
CTDSP1-208ENST00000482272 ALG9Q9H6U8 611 aa12.53□□□□□ -0.4
CTDSP1-208ENST00000482272 TIMMDC1Q9NPL8 285 aa12.53□□□□□ -0.4
CTDSP1-208ENST00000482272 NUDT4Q9NZJ9 180 aa12.53□□□□□ -0.4
CTDSP1-208ENST00000482272 VTI1BQ9UEU0 232 aa12.53□□□□□ -0.4
CTDSP1-208ENST00000482272 ERVK-11Q9UQG0 969 aa12.53□□□□□ -0.4
CTDSP1-208ENST00000482272 MYO7BQ6PIF6 2116 aa12.53□□□□□ -0.4
CTDSP1-208ENST00000482272 DIDO1Q9BTC0 2240 aaKnown RBP12.53□□□□□ -0.4
CTDSP1-208ENST00000482272 CSMD1Q96PZ7 3565 aa12.52□□□□□ -0.4
CTDSP1-208ENST00000482272 SUPT3HB4E1H0 165 aa12.52□□□□□ -0.41
CTDSP1-208ENST00000482272 SUPT3HO75486 399 aa12.52□□□□□ -0.41
CTDSP1-208ENST00000482272 LTA4HP09960 611 aaKnown RBP12.52□□□□□ -0.41
CTDSP1-208ENST00000482272 TFEBP19484 476 aa12.52□□□□□ -0.41
CTDSP1-208ENST00000482272 GRNP28799 593 aaKnown RBP12.52□□□□□ -0.41
CTDSP1-208ENST00000482272 ADORA2A-AS1P86434 159 aa12.52□□□□□ -0.41
CTDSP1-208ENST00000482272 NAB1Q13506 487 aa12.52□□□□□ -0.41
CTDSP1-208ENST00000482272 SERTAD2Q14140 314 aa12.52□□□□□ -0.41
CTDSP1-208ENST00000482272 SLMAPQ14BN4 828 aa12.52□□□□□ -0.41
CTDSP1-208ENST00000482272 TMEM35AQ53FP2 167 aa12.52□□□□□ -0.41
CTDSP1-208ENST00000482272 RNFT1Q5M7Z0 435 aa12.52□□□□□ -0.41
CTDSP1-208ENST00000482272 MED27Q6P2C8 311 aa12.52□□□□□ -0.41
CTDSP1-208ENST00000482272 SYT10Q6XYQ8 523 aa12.52□□□□□ -0.41
CTDSP1-208ENST00000482272 MCEMP1Q8IX19 187 aa12.52□□□□□ -0.41
CTDSP1-208ENST00000482272 GPALPP1Q8IXQ4 340 aa12.52□□□□□ -0.41
CTDSP1-208ENST00000482272 C16orf52Q8NHV5 167 aa12.52□□□□□ -0.41
CTDSP1-208ENST00000482272 FBF1Q8TES7 1133 aa12.52□□□□□ -0.41
CTDSP1-208ENST00000482272 ZNF473Q8WTR7 871 aaKnown RBP12.52□□□□□ -0.41
CTDSP1-208ENST00000482272 LYRM4Q9HD34 91 aa12.52□□□□□ -0.41
CTDSP1-208ENST00000482272 OPTCQ9UBM4 332 aa12.52□□□□□ -0.41
CTDSP1-208ENST00000482272 ADGRE2Q9UHX3 823 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms