RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 MAPK10P53779 464 aa13.79□□□□□ -0.2
CHD3-211ENST00000481999 C2orf80Q0P641 193 aa13.79□□□□□ -0.2
CHD3-211ENST00000481999 SPIDRQ14159 915 aa13.79□□□□□ -0.2
CHD3-211ENST00000481999 DPY19L1Q2PZI1 675 aa13.79□□□□□ -0.2
CHD3-211ENST00000481999 VTCN1Q7Z7D3 282 aa13.79□□□□□ -0.2
CHD3-211ENST00000481999 SERPINA11Q86U17 422 aa13.79□□□□□ -0.2
CHD3-211ENST00000481999 ZDHHC21Q8IVQ6 265 aa13.79□□□□□ -0.2
CHD3-211ENST00000481999 SMYD1Q8NB12 490 aa13.79□□□□□ -0.2
CHD3-211ENST00000481999 SGCDQ92629 289 aa13.79□□□□□ -0.2
CHD3-211ENST00000481999 MUL1Q969V5 352 aa13.79□□□□□ -0.2
CHD3-211ENST00000481999 NODALQ96S42 347 aa13.79□□□□□ -0.2
CHD3-211ENST00000481999 TPT1P8Q9HAU6 139 aa13.79□□□□□ -0.2
CHD3-211ENST00000481999 PALMDQ9NP74 551 aa13.79□□□□□ -0.2
CHD3-211ENST00000481999 LHX9Q9NQ69 397 aa13.79□□□□□ -0.2
CHD3-211ENST00000481999 FAIMQ9NVQ4 179 aa13.79□□□□□ -0.2
CHD3-211ENST00000481999 WARS2Q9UGM6 360 aaKnown RBP13.79□□□□□ -0.2
CHD3-211ENST00000481999 NAALAD2Q9Y3Q0 740 aa13.79□□□□□ -0.2
CHD3-211ENST00000481999 C4orf51C9J302 202 aa13.78□□□□□ -0.2
CHD3-211ENST00000481999 SLC1A7O00341 560 aa13.78□□□□□ -0.2
CHD3-211ENST00000481999 FOXE1O00358 373 aaPredicted RBP13.78□□□□□ -0.2
CHD3-211ENST00000481999 BCKDKO14874 412 aa13.78□□□□□ -0.2
CHD3-211ENST00000481999 KCNK5O95279 499 aa13.78□□□□□ -0.2
CHD3-211ENST00000481999 ZNF682O95780 498 aa13.78□□□□□ -0.2
CHD3-211ENST00000481999 ITIH1P19827 911 aa13.78□□□□□ -0.2
CHD3-211ENST00000481999 SRSF11Q05519 484 aaKnown RBP13.78□□□□□ -0.2
CHD3-211ENST00000481999 CYP2A13Q16696 494 aa13.78□□□□□ -0.2
CHD3-211ENST00000481999 CPZQ66K79 652 aa13.78□□□□□ -0.2
CHD3-211ENST00000481999 LAIR2Q6ISS4 152 aa13.78□□□□□ -0.2
CHD3-211ENST00000481999 GALNT18Q6P9A2 607 aa13.78□□□□□ -0.2
CHD3-211ENST00000481999 PTOV1Q86YD1 416 aa13.78□□□□□ -0.2
CHD3-211ENST00000481999 TMEM145Q8NBT3 493 aa13.78□□□□□ -0.2
CHD3-211ENST00000481999 REPS1Q96D71 796 aa13.78□□□□□ -0.2
CHD3-211ENST00000481999 GABARAPL1Q9H0R8 117 aa13.78□□□□□ -0.2
CHD3-211ENST00000481999 TCEAL2Q9H3H9 227 aaPredicted RBP13.78□□□□□ -0.2
CHD3-211ENST00000481999 EHD1Q9H4M9 534 aa13.78□□□□□ -0.2
CHD3-211ENST00000481999 C6orf106Q9H6K1 298 aaPredicted RBP13.78□□□□□ -0.2
CHD3-211ENST00000481999 AASDHPPTQ9NRN7 309 aa13.78□□□□□ -0.2
CHD3-211ENST00000481999 ACSL5Q9ULC5 683 aa13.78□□□□□ -0.2
CHD3-211ENST00000481999 SCN2AQ99250 2005 aa13.78□□□□□ -0.2
CHD3-211ENST00000481999 ANKDD1BA6NHY2 528 aa13.78□□□□□ -0.2
CHD3-211ENST00000481999 PRR19A6NJB7 356 aa13.78□□□□□ -0.2
CHD3-211ENST00000481999 MAGEB3O15480 346 aa13.78□□□□□ -0.2
CHD3-211ENST00000481999 PRMT3O60678 531 aa13.78□□□□□ -0.2
CHD3-211ENST00000481999 EPN2O95208 641 aa13.78□□□□□ -0.2
CHD3-211ENST00000481999 FURINP09958 794 aa13.78□□□□□ -0.2
CHD3-211ENST00000481999 DRD1P21728 446 aa13.78□□□□□ -0.2
CHD3-211ENST00000481999 IGFBP5P24593 272 aa13.78□□□□□ -0.2
CHD3-211ENST00000481999 PXNP49023 591 aaPredicted RBP13.78□□□□□ -0.2
CHD3-211ENST00000481999 ALDH9A1P49189 494 aa13.78□□□□□ -0.2
CHD3-211ENST00000481999 ARHGDIAP52565 204 aa13.78□□□□□ -0.2
CHD3-211ENST00000481999 RPE65Q16518 533 aa13.78□□□□□ -0.2
CHD3-211ENST00000481999 SLC9B2Q86UD5 537 aa13.78□□□□□ -0.2
CHD3-211ENST00000481999 SETD9Q8NE22 299 aa13.78□□□□□ -0.2
CHD3-211ENST00000481999 PIK3C3Q8NEB9 887 aa13.78□□□□□ -0.2
CHD3-211ENST00000481999 OR4E2Q8NGC2 313 aa13.78□□□□□ -0.2
CHD3-211ENST00000481999 OR4A15Q8NGL6 344 aa13.78□□□□□ -0.2
CHD3-211ENST00000481999 FBLIM1Q8WUP2 373 aa13.78□□□□□ -0.2
CHD3-211ENST00000481999 SMPDL3AQ92484 453 aa13.78□□□□□ -0.2
CHD3-211ENST00000481999 FAM3CQ92520 227 aa13.78□□□□□ -0.2
CHD3-211ENST00000481999 ZNF566Q969W8 418 aa13.78□□□□□ -0.2
CHD3-211ENST00000481999 PLEKHA8Q96JA3 519 aa13.78□□□□□ -0.2
CHD3-211ENST00000481999 NECTIN4Q96NY8 510 aa13.78□□□□□ -0.2
CHD3-211ENST00000481999 RAD21L1Q9H4I0 556 aa13.78□□□□□ -0.2
CHD3-211ENST00000481999 KLHL31Q9H511 634 aa13.78□□□□□ -0.2
CHD3-211ENST00000481999 BAG5Q9UL15 447 aa13.78□□□□□ -0.2
CHD3-211ENST00000481999 C1orf226A1L170 272 aa13.77□□□□□ -0.21
CHD3-211ENST00000481999 RASGRP1O95267 797 aa13.77□□□□□ -0.21
CHD3-211ENST00000481999 ZNF12P17014 697 aa13.77□□□□□ -0.21
CHD3-211ENST00000481999 AGXTP21549 392 aa13.77□□□□□ -0.21
CHD3-211ENST00000481999 RAB28P51157 221 aa13.77□□□□□ -0.21
CHD3-211ENST00000481999 CRYBA2P53672 197 aa13.77□□□□□ -0.21
CHD3-211ENST00000481999 CSNK1G2P78368 415 aa13.77□□□□□ -0.21
CHD3-211ENST00000481999 ZNF33BQ06732 778 aa13.77□□□□□ -0.21
CHD3-211ENST00000481999 DMPKQ09013 629 aa13.77□□□□□ -0.21
CHD3-211ENST00000481999 UAP1L1Q3KQV9 507 aa13.77□□□□□ -0.21
CHD3-211ENST00000481999 ANKDD1AQ495B1 522 aa13.77□□□□□ -0.21
CHD3-211ENST00000481999 SHISA5Q8N114 240 aa13.77□□□□□ -0.21
CHD3-211ENST00000481999 NAGSQ8N159 534 aa13.77□□□□□ -0.21
CHD3-211ENST00000481999 METTL4Q8N3J2 472 aa13.77□□□□□ -0.21
CHD3-211ENST00000481999 RNF217Q8TC41 542 aa13.77□□□□□ -0.21
CHD3-211ENST00000481999 GIPC3Q8TF64 312 aa13.77□□□□□ -0.21
CHD3-211ENST00000481999 SLC6A16Q9GZN6 736 aa13.77□□□□□ -0.21
CHD3-211ENST00000481999 KLHL25Q9H0H3 589 aa13.77□□□□□ -0.21
CHD3-211ENST00000481999 SLAMF7Q9NQ25 335 aa13.77□□□□□ -0.21
CHD3-211ENST00000481999 FAM120CQ9NX05 1096 aaKnown RBP13.77□□□□□ -0.21
CHD3-211ENST00000481999 TEX10Q9NXF1 929 aaPredicted RBP13.77□□□□□ -0.21
CHD3-211ENST00000481999 FZD4Q9ULV1 537 aa13.77□□□□□ -0.21
CHD3-211ENST00000481999 TMPRSS11DO60235 418 aa13.77□□□□□ -0.21
CHD3-211ENST00000481999 UGT2B11O75310 529 aa13.77□□□□□ -0.21
CHD3-211ENST00000481999 CLPXO76031 633 aa13.77□□□□□ -0.21
CHD3-211ENST00000481999 CELA2BP08218 269 aaPredicted RBP13.77□□□□□ -0.21
CHD3-211ENST00000481999 ACTR1BP42025 376 aa13.77□□□□□ -0.21
CHD3-211ENST00000481999 BMXP51813 675 aa13.77□□□□□ -0.21
CHD3-211ENST00000481999 ACTR1AP61163 376 aa13.77□□□□□ -0.21
CHD3-211ENST00000481999 CYP27C1Q4G0S4 372 aa13.77□□□□□ -0.21
CHD3-211ENST00000481999 OR2T5Q6IEZ7 315 aa13.77□□□□□ -0.21
CHD3-211ENST00000481999 ERICH5Q6P6B1 374 aa13.77□□□□□ -0.21
CHD3-211ENST00000481999 C16orf87Q6PH81 154 aa13.77□□□□□ -0.21
CHD3-211ENST00000481999 ZZZ3Q8IYH5 903 aa13.77□□□□□ -0.21
CHD3-211ENST00000481999 DEFB119Q8N690 84 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms