RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 LINC00032P0C843 101 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 IL10P22301 178 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 PTX3P26022 381 aaPredicted RBP11.01□□□□□ -0.65
HPS4-212ENST00000481910 CBX5P45973 191 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 STXBP1P61764 594 aaKnown RBP11.01□□□□□ -0.65
HPS4-212ENST00000481910 GNGT1P63211 74 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 LSAMPQ13449 338 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 COL9A2Q14055 689 aaPredicted RBP11.01□□□□□ -0.65
HPS4-212ENST00000481910 GNA13Q14344 377 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 GRM7Q14831 915 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 NT5CQ8TCD5 201 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 FAR2Q96K12 515 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 CEP19Q96LK0 163 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 PPP1R36Q96LQ0 422 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 SIKE1Q9BRV8 207 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 REXO4Q9GZR2 422 aaKnown RBP11.01□□□□□ -0.65
HPS4-212ENST00000481910 OR51B5Q9H339 312 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 TUBB1Q9H4B7 451 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 BRF2Q9HAW0 419 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 FGFR1OP2Q9NVK5 253 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 PTGDR2Q9Y5Y4 395 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 A0A1W2PNU3 283 aaPredicted RBP11.01□□□□□ -0.65
HPS4-212ENST00000481910 HYKKA2RU49 373 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 PMS2P1A4D2B8 440 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 URADA6NGE7 173 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 SLCO1B7G3V0H7 640 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 H3BMH7 237 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 PIP5K1BO14986 540 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 TBX6O95947 436 aaPredicted RBP11.01□□□□□ -0.65
HPS4-212ENST00000481910 FGF5P12034 268 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 RAC2P15153 192 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 ETV5P41161 510 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 HYAL2Q12891 473 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 CSTF3Q12996 717 aaKnown RBP11.01□□□□□ -0.65
HPS4-212ENST00000481910 IMPG1Q17R60 797 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 PRTGQ2VWP7 1150 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 FAM214AQ32MH5 1076 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 TOR1AIP1Q5JTV8 583 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 DCAF12Q5T6F0 453 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 PRAMEF17Q5VTA0 474 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 KHDRBS2Q5VWX1 349 aaKnown RBP11.01□□□□□ -0.65
HPS4-212ENST00000481910 PWWP2BQ6NUJ5 590 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 CCDC81Q6ZN84 652 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 TMEM126BQ8IUX1 230 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 CCDC116Q8IYX3 515 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 TTC29Q8NA56 475 aaPredicted RBP11.01□□□□□ -0.65
HPS4-212ENST00000481910 F2RL3Q96RI0 385 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 TAAR9Q96RI9 348 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 SERPINI1Q99574 410 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 CENPKQ9BS16 269 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 MS4A8Q9BY19 250 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 ACPTQ9BZG2 426 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 SLC6A16Q9GZN6 736 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 KLHL31Q9H511 634 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 SCPEP1Q9HB40 452 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 NMRK1Q9NWW6 199 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 VTI1BQ9UEU0 232 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 SLC12A4Q9UP95 1085 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 SCN3AQ9NY46 2000 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 SERTM1A2A2V5 107 aa11□□□□□ -0.65
HPS4-212ENST00000481910 FITM1A5D6W6 292 aa11□□□□□ -0.65
HPS4-212ENST00000481910 SLC28A1O00337 649 aa11□□□□□ -0.65
HPS4-212ENST00000481910 SAP18O00422 153 aaKnown RBP11□□□□□ -0.65
HPS4-212ENST00000481910 HDAC3O15379 428 aa11□□□□□ -0.65
HPS4-212ENST00000481910 ZNF749O43361 778 aa11□□□□□ -0.65
HPS4-212ENST00000481910 SCRG1O75711 98 aa11□□□□□ -0.65
HPS4-212ENST00000481910 ETHE1O95571 254 aa11□□□□□ -0.65
HPS4-212ENST00000481910 JUNP05412 331 aaKnown RBP11□□□□□ -0.65
HPS4-212ENST00000481910 HSD3B1P14060 373 aa11□□□□□ -0.65
HPS4-212ENST00000481910 ALAS2P22557 587 aa11□□□□□ -0.65
HPS4-212ENST00000481910 HSD3B2P26439 372 aa11□□□□□ -0.65
HPS4-212ENST00000481910 LSP1P33241 339 aa11□□□□□ -0.65
HPS4-212ENST00000481910 HK2P52789 917 aa11□□□□□ -0.65
HPS4-212ENST00000481910 HMGCS1Q01581 520 aa11□□□□□ -0.65
HPS4-212ENST00000481910 FOXC1Q12948 553 aa11□□□□□ -0.65
HPS4-212ENST00000481910 NDUFA9Q16795 377 aa11□□□□□ -0.65
HPS4-212ENST00000481910 SPDYAQ5MJ70 313 aa11□□□□□ -0.65
HPS4-212ENST00000481910 TMEM214Q6NUQ4 689 aaKnown RBP11□□□□□ -0.65
HPS4-212ENST00000481910 CEACAM20Q6UY09 585 aa11□□□□□ -0.65
HPS4-212ENST00000481910 TRIM46Q7Z4K8 759 aa11□□□□□ -0.65
HPS4-212ENST00000481910 SPATA24Q86W54 205 aa11□□□□□ -0.65
HPS4-212ENST00000481910 LRRC34Q8IZ02 419 aa11□□□□□ -0.65
HPS4-212ENST00000481910 OR7G1Q8NGA0 311 aa11□□□□□ -0.65
HPS4-212ENST00000481910 ZCCHC10Q8TBK6 192 aa11□□□□□ -0.65
HPS4-212ENST00000481910 MS4A6EQ96DS6 147 aa11□□□□□ -0.65
HPS4-212ENST00000481910 C19orf60Q96EN9 201 aa11□□□□□ -0.65
HPS4-212ENST00000481910 CHMP6Q96FZ7 201 aa11□□□□□ -0.65
HPS4-212ENST00000481910 COG8Q96MW5 612 aa11□□□□□ -0.65
HPS4-212ENST00000481910 ZNF317Q96PQ6 595 aaPredicted RBP11□□□□□ -0.65
HPS4-212ENST00000481910 TUBA1CQ9BQE3 449 aa11□□□□□ -0.65
HPS4-212ENST00000481910 NDC1Q9BTX1 674 aa11□□□□□ -0.65
HPS4-212ENST00000481910 ASPSCR1Q9BZE9 553 aa11□□□□□ -0.65
HPS4-212ENST00000481910 VPS29Q9UBQ0 182 aa11□□□□□ -0.65
HPS4-212ENST00000481910 PPT2Q9UMR5 302 aa11□□□□□ -0.65
HPS4-212ENST00000481910 LRRC42Q9Y546 428 aa11□□□□□ -0.65
HPS4-212ENST00000481910 ATP6AP2A0A1C7CYW4 349 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 TRPC5OSA6NMA1 111 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 ERI3O43414 337 aaKnown RBP10.99□□□□□ -0.65
HPS4-212ENST00000481910 RGS14O43566 566 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 ATP6AP2O75787 350 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms