RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 PI15O43692 258 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 HBP1O60381 514 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 GMDSO60547 372 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 GLRA3O75311 464 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 SNNO75324 88 aaPredicted RBP3.87□□□□□ -1.79
CMSS1-204ENST00000479555 CRTAPO75718 401 aaPredicted RBP3.87□□□□□ -1.79
CMSS1-204ENST00000479555 UGT2B17O75795 530 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 NFATC1O95644 943 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 HPRP00739 348 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 SERPINE1P05121 402 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 LCKP06239 509 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 S100A9P06702 114 aaKnown RBP3.87□□□□□ -1.79
CMSS1-204ENST00000479555 APOA4P06727 396 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 GPIP06744 558 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 DBTP11182 482 aaKnown RBP3.87□□□□□ -1.79
CMSS1-204ENST00000479555 SFTPCP11686 197 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 COX4I1P13073 169 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 RPS2P15880 293 aaKnown RBP3.87□□□□□ -1.79
CMSS1-204ENST00000479555 ZNF182P17025 639 aaPredicted RBP3.87□□□□□ -1.79
CMSS1-204ENST00000479555 CD53P19397 219 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 EEF1B2P24534 225 aaKnown RBP3.87□□□□□ -1.79
CMSS1-204ENST00000479555 FASP25445 335 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 DNAJB1P25685 340 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 HLA-FP30511 346 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 CHRNA5P30532 468 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 SHMT1P34896 483 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 RFC4P35249 363 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 RPL22P35268 128 aaKnown RBP3.87□□□□□ -1.79
CMSS1-204ENST00000479555 SOX6P35712 828 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 HTR2BP41595 481 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 NSFP46459 744 aaKnown RBP3.87□□□□□ -1.79
CMSS1-204ENST00000479555 CCR5P51681 352 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 NDST1P52848 882 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 MVDP53602 400 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 UGT2B15P54855 530 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 OR2B6P58173 313 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 HAND2P61296 217 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 OTUD4Q01804 1114 aaKnown RBP3.87□□□□□ -1.79
CMSS1-204ENST00000479555 GNA12Q03113 381 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 PRKCDQ05655 676 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 TNK1Q13470 666 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 ALCAMQ13740 583 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 PKN2Q16513 984 aaKnown RBP3.87□□□□□ -1.79
CMSS1-204ENST00000479555 RFX4Q33E94 735 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 TIMM50Q3ZCQ8 353 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 SLC36A3Q495N2 470 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 NHSL2Q5HYW2 709 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 FGD3Q5JSP0 725 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 SPANXN2Q5MJ10 180 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 SAMD4BQ5PRF9 694 aaKnown RBP3.87□□□□□ -1.79
CMSS1-204ENST00000479555 BRMS1LQ5PSV4 323 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 C9orf50Q5SZB4 431 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.87□□□□□ -1.79
CMSS1-204ENST00000479555 MPP7Q5T2T1 576 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 HES5Q5TA89 166 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 FAM109BQ6ICB4 259 aaPredicted RBP3.87□□□□□ -1.79
CMSS1-204ENST00000479555 RETSATQ6NUM9 610 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 PGAP1Q75T13 922 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 BTN2A1Q7KYR7 527 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 PRSS42Q7Z5A4 293 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 CTU1Q7Z7A3 348 aaKnown RBP3.87□□□□□ -1.79
CMSS1-204ENST00000479555 DNAAF5Q86Y56 855 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 PLD3Q8IV08 490 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 SCN4BQ8IWT1 228 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 AQP12AQ8IXF9 295 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 GPALPP1Q8IXQ4 340 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 C4orf33Q8N1A6 199 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 SCML4Q8N228 414 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 TTC29Q8NA56 475 aaPredicted RBP3.87□□□□□ -1.79
CMSS1-204ENST00000479555 OR7G3Q8NG95 312 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 OR6Q1Q8NGQ2 317 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 ZFAND1Q8TCF1 268 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 URGCPQ8TCY9 931 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 TMEM174Q8WUU8 243 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 HDAC2Q92769 488 aaKnown RBP3.87□□□□□ -1.79
CMSS1-204ENST00000479555 RPL3LQ92901 407 aaKnown RBP3.87□□□□□ -1.79
CMSS1-204ENST00000479555 CCDC124Q96CT7 223 aaKnown RBP3.87□□□□□ -1.79
CMSS1-204ENST00000479555 RADILQ96JH8 1075 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 HYLS1Q96M11 299 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 GLT1D1Q96MS3 346 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 SERPINB11Q96P15 392 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 PAFAH2Q99487 392 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 SORT1Q99523 831 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 KCTD14Q9BQ13 255 aaPredicted RBP3.87□□□□□ -1.79
CMSS1-204ENST00000479555 EIF2AK1Q9BQI3 630 aaKnown RBP3.87□□□□□ -1.79
CMSS1-204ENST00000479555 FAM213AQ9BRX8 229 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 MTG1Q9BT17 334 aaPredicted RBP3.87□□□□□ -1.79
CMSS1-204ENST00000479555 TMEM121Q9BTD3 319 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 MLPHQ9BV36 600 aaPredicted RBP3.87□□□□□ -1.79
CMSS1-204ENST00000479555 SF3B5Q9BWJ5 86 aaKnown RBP3.87□□□□□ -1.79
CMSS1-204ENST00000479555 ZNF416Q9BWM5 594 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 GTPBP2Q9BX10 602 aaKnown RBP3.87□□□□□ -1.79
CMSS1-204ENST00000479555 NUSAP1Q9BXS6 441 aaKnown RBP3.87□□□□□ -1.79
CMSS1-204ENST00000479555 MTMR12Q9C0I1 747 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 ING2Q9H160 280 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 ERVMER34-1Q9H9K5 563 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 COPS7BQ9H9Q2 264 aaPredicted RBP3.87□□□□□ -1.79
CMSS1-204ENST00000479555 NANOGQ9H9S0 305 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 PCDH9Q9HC56 1237 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 C6orf50Q9HD87 102 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms