RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 HSDL2Q6YN16 418 aa14.9□□□□□ -0.02
DDX56-210ENST00000479440 SPNS2Q8IVW8 549 aa14.9□□□□□ -0.02
DDX56-210ENST00000479440 TMEM132CQ8N3T6 1108 aa14.9□□□□□ -0.02
DDX56-210ENST00000479440 RNF214Q8ND24 703 aa14.9□□□□□ -0.02
DDX56-210ENST00000479440 PYCR2Q96C36 320 aa14.9□□□□□ -0.02
DDX56-210ENST00000479440 TRIM5Q9C035 493 aa14.9□□□□□ -0.02
DDX56-210ENST00000479440 LIN28AQ9H9Z2 209 aaKnown RBP14.9□□□□□ -0.02
DDX56-210ENST00000479440 BEX4Q9NWD9 120 aaPredicted RBP14.9□□□□□ -0.02
DDX56-210ENST00000479440 ARL15Q9NXU5 204 aa14.9□□□□□ -0.02
DDX56-210ENST00000479440 FLNAP21333 2647 aaKnown RBP14.9□□□□□ -0.02
DDX56-210ENST00000479440 WWP2O00308 870 aa14.89□□□□□ -0.03
DDX56-210ENST00000479440 CELA3AP09093 270 aa14.89□□□□□ -0.03
DDX56-210ENST00000479440 PPP2R1BP30154 601 aa14.89□□□□□ -0.03
DDX56-210ENST00000479440 GPR143P51810 404 aa14.89□□□□□ -0.03
DDX56-210ENST00000479440 HK2P52789 917 aa14.89□□□□□ -0.03
DDX56-210ENST00000479440 AP1S2P56377 157 aa14.89□□□□□ -0.03
DDX56-210ENST00000479440 STXBP1P61764 594 aaKnown RBP14.89□□□□□ -0.03
DDX56-210ENST00000479440 ZNF750Q32MQ0 723 aa14.89□□□□□ -0.03
DDX56-210ENST00000479440 TOR1AIP1Q5JTV8 583 aa14.89□□□□□ -0.03
DDX56-210ENST00000479440 DRICH1Q6PGQ1 229 aaPredicted RBP14.89□□□□□ -0.03
DDX56-210ENST00000479440 OPN5Q6U736 354 aa14.89□□□□□ -0.03
DDX56-210ENST00000479440 KIF18BQ86Y91 864 aa14.89□□□□□ -0.03
DDX56-210ENST00000479440 OR56A3Q8NH54 315 aa14.89□□□□□ -0.03
DDX56-210ENST00000479440 EEF1AKMT1Q8WVE0 214 aa14.89□□□□□ -0.03
DDX56-210ENST00000479440 ATL1Q8WXF7 558 aa14.89□□□□□ -0.03
DDX56-210ENST00000479440 DAZLQ92904 295 aaKnown RBP14.89□□□□□ -0.03
DDX56-210ENST00000479440 GAL3ST3Q96A11 431 aa14.89□□□□□ -0.03
DDX56-210ENST00000479440 FAR2Q96K12 515 aa14.89□□□□□ -0.03
DDX56-210ENST00000479440 SCYL1Q96KG9 808 aa14.89□□□□□ -0.03
DDX56-210ENST00000479440 OR4K3Q96R72 315 aa14.89□□□□□ -0.03
DDX56-210ENST00000479440 AIF1LQ9BQI0 150 aa14.89□□□□□ -0.03
DDX56-210ENST00000479440 CNPPD1Q9BV87 410 aa14.89□□□□□ -0.03
DDX56-210ENST00000479440 NPLQ9BXD5 320 aaPredicted RBP14.89□□□□□ -0.03
DDX56-210ENST00000479440 SPNS1Q9H2V7 528 aa14.89□□□□□ -0.03
DDX56-210ENST00000479440 TSPY26PQ9H489 355 aa14.89□□□□□ -0.03
DDX56-210ENST00000479440 ATG4BQ9Y4P1 393 aa14.89□□□□□ -0.03
DDX56-210ENST00000479440 MAD1L1Q9Y6D9 718 aa14.89□□□□□ -0.03
DDX56-210ENST00000479440 CAPN6Q9Y6Q1 641 aa14.89□□□□□ -0.03
DDX56-210ENST00000479440 A0A088AWK7 358 aa14.88□□□□□ -0.03
DDX56-210ENST00000479440 TCRBV7S3A2A0A539 114 aa14.88□□□□□ -0.03
DDX56-210ENST00000479440 MAGEB16A2A368 324 aa14.88□□□□□ -0.03
DDX56-210ENST00000479440 TUBAL3A6NHL2 446 aa14.88□□□□□ -0.03
DDX56-210ENST00000479440 NRDCO43847 1150 aa14.88□□□□□ -0.03
DDX56-210ENST00000479440 SERPINA6P08185 405 aa14.88□□□□□ -0.03
DDX56-210ENST00000479440 SMIM10L1P0DMW3 83 aa14.88□□□□□ -0.03
DDX56-210ENST00000479440 EPXP11678 715 aa14.88□□□□□ -0.03
DDX56-210ENST00000479440 ENDOUP21128 410 aaKnown RBP14.88□□□□□ -0.03
DDX56-210ENST00000479440 ZNF10P21506 573 aaPredicted RBP14.88□□□□□ -0.03
DDX56-210ENST00000479440 DNASE1L1P49184 302 aa14.88□□□□□ -0.03
DDX56-210ENST00000479440 RAB38P57729 211 aa14.88□□□□□ -0.03
DDX56-210ENST00000479440 FOXO1Q12778 655 aa14.88□□□□□ -0.03
DDX56-210ENST00000479440 CHSY3Q70JA7 882 aa14.88□□□□□ -0.03
DDX56-210ENST00000479440 MAATS1Q7Z4T9 603 aa14.88□□□□□ -0.03
DDX56-210ENST00000479440 TMPRSS11BQ86T26 416 aa14.88□□□□□ -0.03
DDX56-210ENST00000479440 PRIMA1Q86XR5 153 aa14.88□□□□□ -0.03
DDX56-210ENST00000479440 ULK2Q8IYT8 1036 aa14.88□□□□□ -0.03
DDX56-210ENST00000479440 ANKRD53Q8N9V6 530 aa14.88□□□□□ -0.03
DDX56-210ENST00000479440 LRRN4CLQ8ND94 238 aa14.88□□□□□ -0.03
DDX56-210ENST00000479440 NEIL2Q969S2 332 aa14.88□□□□□ -0.03
DDX56-210ENST00000479440 LINGO1Q96FE5 620 aa14.88□□□□□ -0.03
DDX56-210ENST00000479440 SMIM10Q96HG1 83 aa14.88□□□□□ -0.03
DDX56-210ENST00000479440 FAM167BQ9BTA0 163 aa14.88□□□□□ -0.03
DDX56-210ENST00000479440 TRIM54Q9BYV2 358 aa14.88□□□□□ -0.03
DDX56-210ENST00000479440 ZNF703Q9H7S9 590 aaPredicted RBP14.88□□□□□ -0.03
DDX56-210ENST00000479440 PELI2Q9HAT8 420 aa14.88□□□□□ -0.03
DDX56-210ENST00000479440 TUBA8Q9NY65 449 aaPredicted RBP14.88□□□□□ -0.03
DDX56-210ENST00000479440 TAS2R13Q9NYV9 303 aa14.88□□□□□ -0.03
DDX56-210ENST00000479440 SPRR3Q9UBC9 169 aa14.88□□□□□ -0.03
DDX56-210ENST00000479440 BOKQ9UMX3 212 aaPredicted RBP14.88□□□□□ -0.03
DDX56-210ENST00000479440 ZKSCAN5Q9Y2L8 839 aa14.88□□□□□ -0.03
DDX56-210ENST00000479440 DYRK1BQ9Y463 629 aa14.88□□□□□ -0.03
DDX56-210ENST00000479440 CLCA3PQ9Y6N3 262 aa14.88□□□□□ -0.03
DDX56-210ENST00000479440 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.88□□□□□ -0.03
DDX56-210ENST00000479440 VPS13CQ709C8 3753 aa14.87□□□□□ -0.03
DDX56-210ENST00000479440 ZCWPW2A0A1B0GU75 182 aa14.87□□□□□ -0.03
DDX56-210ENST00000479440 C4orf51C9J302 202 aa14.87□□□□□ -0.03
DDX56-210ENST00000479440 IFNA16P05015 189 aa14.87□□□□□ -0.03
DDX56-210ENST00000479440 SAT1P21673 171 aa14.87□□□□□ -0.03
DDX56-210ENST00000479440 BTN3A2P78410 334 aa14.87□□□□□ -0.03
DDX56-210ENST00000479440 NKX6-1P78426 367 aaPredicted RBP14.87□□□□□ -0.03
DDX56-210ENST00000479440 CCZ1BP86790 482 aa14.87□□□□□ -0.03
DDX56-210ENST00000479440 CCZ1P86791 482 aaPredicted RBP14.87□□□□□ -0.03
DDX56-210ENST00000479440 SORDQ00796 357 aa14.87□□□□□ -0.03
DDX56-210ENST00000479440 RBBP5Q15291 538 aaKnown RBP14.87□□□□□ -0.03
DDX56-210ENST00000479440 KRTAP1-3Q8IUG1 177 aa14.87□□□□□ -0.03
DDX56-210ENST00000479440 ZNF595Q8IYB9 648 aa14.87□□□□□ -0.03
DDX56-210ENST00000479440 LIX1Q8N485 282 aa14.87□□□□□ -0.03
DDX56-210ENST00000479440 FAM47BQ8NA70 645 aa14.87□□□□□ -0.03
DDX56-210ENST00000479440 MORN4Q8NDC4 146 aa14.87□□□□□ -0.03
DDX56-210ENST00000479440 OR5L2Q8NGL0 311 aa14.87□□□□□ -0.03
DDX56-210ENST00000479440 OR8K3Q8NH51 312 aa14.87□□□□□ -0.03
DDX56-210ENST00000479440 OR14A16Q8NHC5 309 aa14.87□□□□□ -0.03
DDX56-210ENST00000479440 SPATA3Q8NHX4 192 aa14.87□□□□□ -0.03
DDX56-210ENST00000479440 FBXL8Q96CD0 374 aa14.87□□□□□ -0.03
DDX56-210ENST00000479440 TSNARE1Q96NA8 513 aa14.87□□□□□ -0.03
DDX56-210ENST00000479440 MDFIQ99750 246 aa14.87□□□□□ -0.03
DDX56-210ENST00000479440 YIPF4Q9BSR8 244 aa14.87□□□□□ -0.03
DDX56-210ENST00000479440 KLHL31Q9H511 634 aa14.87□□□□□ -0.03
DDX56-210ENST00000479440 PLEKHF2Q9H8W4 249 aa14.87□□□□□ -0.03
DDX56-210ENST00000479440 C20orf96Q9NUD7 363 aaPredicted RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms