RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 SEMA7AO75326 666 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 EPPINO95925 133 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 MGAT2Q10469 447 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 SQSTM1Q13501 440 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 ELOAQ14241 798 aaKnown RBP11.49□□□□□ -0.57
PRPF39-203ENST00000477626 MANEAQ5SRI9 462 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 CBLL1Q75N03 491 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 CARM1Q86X55 608 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 NUDT13Q86X67 352 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 ACOT4Q8N9L9 421 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 OR52N2Q8NGI0 321 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 LCN9Q8WX39 176 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 GAL3ST3Q96A11 431 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 AMDHD1Q96NU7 426 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 FUZQ9BT04 418 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 GABARAPL1Q9H0R8 117 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 TPT1P8Q9HAU6 139 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 PILRBQ9UKJ0 227 aa11.49□□□□□ -0.57
PRPF39-203ENST00000477626 SPAG17Q6Q759 2223 aa11.48□□□□□ -0.57
PRPF39-203ENST00000477626 ELOVL7A1L3X0 281 aa11.48□□□□□ -0.57
PRPF39-203ENST00000477626 HYAL3O43820 417 aaPredicted RBP11.48□□□□□ -0.57
PRPF39-203ENST00000477626 CREG1O75629 220 aa11.48□□□□□ -0.57
PRPF39-203ENST00000477626 PIAS2O75928 621 aa11.48□□□□□ -0.57
PRPF39-203ENST00000477626 C6orf47O95873 294 aa11.48□□□□□ -0.57
PRPF39-203ENST00000477626 DRD2P14416 443 aa11.48□□□□□ -0.57
PRPF39-203ENST00000477626 CMPK1P30085 196 aa11.48□□□□□ -0.57
PRPF39-203ENST00000477626 CAPZBP47756 277 aa11.48□□□□□ -0.57
PRPF39-203ENST00000477626 VMACQ2NL98 169 aa11.48□□□□□ -0.57
PRPF39-203ENST00000477626 PMS2CLQ68D20 193 aa11.48□□□□□ -0.57
PRPF39-203ENST00000477626 SLC48A1Q6P1K1 146 aa11.48□□□□□ -0.57
PRPF39-203ENST00000477626 SLC36A4Q6YBV0 504 aa11.48□□□□□ -0.57
PRPF39-203ENST00000477626 TMEM179BQ7Z7N9 219 aa11.48□□□□□ -0.57
PRPF39-203ENST00000477626 TMEM132CQ8N3T6 1108 aa11.48□□□□□ -0.57
PRPF39-203ENST00000477626 ARL14Q8N4G2 192 aa11.48□□□□□ -0.57
PRPF39-203ENST00000477626 MARVELD2Q8N4S9 558 aa11.48□□□□□ -0.57
PRPF39-203ENST00000477626 KCT2Q8NC54 265 aa11.48□□□□□ -0.57
PRPF39-203ENST00000477626 STMN2Q93045 179 aa11.48□□□□□ -0.57
PRPF39-203ENST00000477626 KCNC2Q96PR1 638 aa11.48□□□□□ -0.57
PRPF39-203ENST00000477626 KLHL4Q9C0H6 718 aa11.48□□□□□ -0.57
PRPF39-203ENST00000477626 A4GALTQ9NPC4 353 aa11.48□□□□□ -0.57
PRPF39-203ENST00000477626 FBXL21Q9UKT6 434 aa11.48□□□□□ -0.57
PRPF39-203ENST00000477626 PDZK1P1A8MUH7 402 aa11.48□□□□□ -0.57
PRPF39-203ENST00000477626 CXCR6O00574 342 aa11.48□□□□□ -0.57
PRPF39-203ENST00000477626 HNRNPRO43390 633 aaKnown RBP11.48□□□□□ -0.57
PRPF39-203ENST00000477626 PRKRAO75569 313 aaKnown RBP11.48□□□□□ -0.57
PRPF39-203ENST00000477626 GSNP06396 782 aa11.48□□□□□ -0.57
PRPF39-203ENST00000477626 ILF3Q12906 894 aaKnown RBP eCLIP11.48□□□□□ -0.57
PRPF39-203ENST00000477626 PGS1Q32NB8 556 aa11.48□□□□□ -0.57
PRPF39-203ENST00000477626 CRB2Q5IJ48 1285 aa11.48□□□□□ -0.57
PRPF39-203ENST00000477626 TMEM64Q6YI46 380 aa11.48□□□□□ -0.57
PRPF39-203ENST00000477626 COMTD1Q86VU5 262 aa11.48□□□□□ -0.57
PRPF39-203ENST00000477626 DNAJC9Q8WXX5 260 aa11.48□□□□□ -0.57
PRPF39-203ENST00000477626 SLC22A18Q96BI1 424 aa11.48□□□□□ -0.57
PRPF39-203ENST00000477626 NAF1Q96HR8 494 aaKnown RBP11.48□□□□□ -0.57
PRPF39-203ENST00000477626 TBCDQ9BTW9 1192 aa11.48□□□□□ -0.57
PRPF39-203ENST00000477626 SRMSQ9H3Y6 488 aa11.48□□□□□ -0.57
PRPF39-203ENST00000477626 GLIPR2Q9H4G4 154 aa11.48□□□□□ -0.57
PRPF39-203ENST00000477626 EPHA6Q9UF33 1036 aa11.48□□□□□ -0.57
PRPF39-203ENST00000477626 CSNK1G3Q9Y6M4 447 aa11.48□□□□□ -0.57
PRPF39-203ENST00000477626 A0A0J9YY10 115 aa11.48□□□□□ -0.57
PRPF39-203ENST00000477626 OR6C74A6NCV1 312 aa11.48□□□□□ -0.57
PRPF39-203ENST00000477626 PABPN1LA6NDY0 278 aaKnown RBP11.48□□□□□ -0.57
PRPF39-203ENST00000477626 PGRMC2O15173 223 aa11.48□□□□□ -0.57
PRPF39-203ENST00000477626 FOXS1O43638 330 aa11.48□□□□□ -0.57
PRPF39-203ENST00000477626 SH3BGRLO75368 114 aa11.48□□□□□ -0.57
PRPF39-203ENST00000477626 RASAL1O95294 804 aa11.48□□□□□ -0.57
PRPF39-203ENST00000477626 AIFM1O95831 613 aa11.48□□□□□ -0.57
PRPF39-203ENST00000477626 JUNDP17535 347 aa11.48□□□□□ -0.57
PRPF39-203ENST00000477626 RPL3P39023 403 aaKnown RBP11.48□□□□□ -0.57
PRPF39-203ENST00000477626 ATXN3P54252 364 aaPredicted RBP11.48□□□□□ -0.57
PRPF39-203ENST00000477626 EPHA4P54764 986 aa11.48□□□□□ -0.57
PRPF39-203ENST00000477626 RUNX2Q13950 521 aa11.48□□□□□ -0.57
PRPF39-203ENST00000477626 RBBP5Q15291 538 aaKnown RBP11.48□□□□□ -0.57
PRPF39-203ENST00000477626 R3HCC1LQ7Z5L2 792 aaKnown RBP11.48□□□□□ -0.57
PRPF39-203ENST00000477626 FBLIM1Q8WUP2 373 aa11.48□□□□□ -0.57
PRPF39-203ENST00000477626 SEMA6CQ9H3T2 930 aa11.48□□□□□ -0.57
PRPF39-203ENST00000477626 ZNF282Q9UDV7 671 aaPredicted RBP11.48□□□□□ -0.57
PRPF39-203ENST00000477626 MN1Q10571 1320 aaPredicted RBP11.48□□□□□ -0.57
PRPF39-203ENST00000477626 SCN3AQ9NY46 2000 aa11.47□□□□□ -0.57
PRPF39-203ENST00000477626 CCDC88CQ9P219 2028 aa11.47□□□□□ -0.57
PRPF39-203ENST00000477626 ZIC2O95409 532 aaPredicted RBP11.47□□□□□ -0.57
PRPF39-203ENST00000477626 TFPTP0C1Z6 253 aa11.47□□□□□ -0.57
PRPF39-203ENST00000477626 FAM58BPP0C7Q3 252 aa11.47□□□□□ -0.57
PRPF39-203ENST00000477626 MAGP20916 626 aa11.47□□□□□ -0.57
PRPF39-203ENST00000477626 ARL1P40616 181 aaPredicted RBP11.47□□□□□ -0.57
PRPF39-203ENST00000477626 CYP4F2P78329 520 aa11.47□□□□□ -0.57
PRPF39-203ENST00000477626 PHEXP78562 749 aa11.47□□□□□ -0.57
PRPF39-203ENST00000477626 IZUMO2Q6UXV1 221 aa11.47□□□□□ -0.57
PRPF39-203ENST00000477626 NATD1Q8N6N6 113 aa11.47□□□□□ -0.57
PRPF39-203ENST00000477626 TMEM52Q8NDY8 209 aa11.47□□□□□ -0.57
PRPF39-203ENST00000477626 SH3GL1Q99961 368 aa11.47□□□□□ -0.57
PRPF39-203ENST00000477626 DPH2Q9BQC3 489 aaPredicted RBP11.47□□□□□ -0.57
PRPF39-203ENST00000477626 PSD2Q9BQI7 771 aa11.47□□□□□ -0.57
PRPF39-203ENST00000477626 TAS2R9Q9NYW1 312 aa11.47□□□□□ -0.57
PRPF39-203ENST00000477626 AXIN1O15169 862 aa11.47□□□□□ -0.57
PRPF39-203ENST00000477626 TIPRLO75663 272 aa11.47□□□□□ -0.57
PRPF39-203ENST00000477626 CD247P20963 164 aa11.47□□□□□ -0.57
PRPF39-203ENST00000477626 MAOBP27338 520 aa11.47□□□□□ -0.57
PRPF39-203ENST00000477626 IGLV3-21P80748 117 aaPredicted RBP11.47□□□□□ -0.57
PRPF39-203ENST00000477626 TXNL4AP83876 142 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms