RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 GLOD5A6NK44 160 aa14.02□□□□□ -0.16
HDAC6-220ENST00000477528 PGRMC2O15173 223 aa14.02□□□□□ -0.16
HDAC6-220ENST00000477528 TAPBPO15533 448 aa14.02□□□□□ -0.16
HDAC6-220ENST00000477528 TLX2O43763 284 aaPredicted RBP14.02□□□□□ -0.16
HDAC6-220ENST00000477528 CSTF2P33240 577 aaKnown RBP eCLIP14.02□□□□□ -0.16
HDAC6-220ENST00000477528 PCGF2P35227 344 aa14.02□□□□□ -0.16
HDAC6-220ENST00000477528 RAPSNQ13702 412 aa14.02□□□□□ -0.16
HDAC6-220ENST00000477528 HNRNPA1L2Q32P51 320 aaKnown RBP14.02□□□□□ -0.16
HDAC6-220ENST00000477528 HS3ST5Q8IZT8 346 aa14.02□□□□□ -0.16
HDAC6-220ENST00000477528 ART5Q96L15 291 aa14.02□□□□□ -0.16
HDAC6-220ENST00000477528 MVB12BQ9H7P6 319 aa14.02□□□□□ -0.16
HDAC6-220ENST00000477528 USP22Q9UPT9 525 aa14.02□□□□□ -0.16
HDAC6-220ENST00000477528 PCDHGA2Q9Y5H1 932 aa14.02□□□□□ -0.16
HDAC6-220ENST00000477528 AP1M2Q9Y6Q5 423 aa14.02□□□□□ -0.16
HDAC6-220ENST00000477528 PRRC2BQ5JSZ5 2229 aaKnown RBP14.02□□□□□ -0.17
HDAC6-220ENST00000477528 RTCAO00442 366 aaKnown RBP14.02□□□□□ -0.17
HDAC6-220ENST00000477528 DRD2P14416 443 aa14.02□□□□□ -0.17
HDAC6-220ENST00000477528 GUCA1AP43080 201 aaPredicted RBP14.02□□□□□ -0.17
HDAC6-220ENST00000477528 ZXDBP98169 803 aa14.02□□□□□ -0.17
HDAC6-220ENST00000477528 DDI2Q5TDH0 399 aa14.02□□□□□ -0.17
HDAC6-220ENST00000477528 CD300LGQ6UXG3 332 aa14.02□□□□□ -0.17
HDAC6-220ENST00000477528 RAB43Q86YS6 212 aa14.02□□□□□ -0.17
HDAC6-220ENST00000477528 TMEM80Q96HE8 168 aa14.02□□□□□ -0.17
HDAC6-220ENST00000477528 LHPPQ9H008 270 aa14.02□□□□□ -0.17
HDAC6-220ENST00000477528 KCNN2Q9H2S1 579 aa14.02□□□□□ -0.17
HDAC6-220ENST00000477528 HLA-DQA2P01906 255 aa14.02□□□□□ -0.17
HDAC6-220ENST00000477528 OR12D1P0DN82 309 aa14.02□□□□□ -0.17
HDAC6-220ENST00000477528 C4BPBP20851 252 aa14.02□□□□□ -0.17
HDAC6-220ENST00000477528 BLKP51451 505 aa14.02□□□□□ -0.17
HDAC6-220ENST00000477528 KEAP1Q14145 624 aa14.02□□□□□ -0.17
HDAC6-220ENST00000477528 CLCA4Q14CN2 919 aa14.02□□□□□ -0.17
HDAC6-220ENST00000477528 C5orf22Q49AR2 442 aa14.02□□□□□ -0.17
HDAC6-220ENST00000477528 CLEC12AQ5QGZ9 265 aa14.02□□□□□ -0.17
HDAC6-220ENST00000477528 IER5LQ5T953 404 aa14.02□□□□□ -0.17
HDAC6-220ENST00000477528 ADGRD2Q7Z7M1 963 aa14.02□□□□□ -0.17
HDAC6-220ENST00000477528 L3MBTL4Q8NA19 623 aa14.02□□□□□ -0.17
HDAC6-220ENST00000477528 OR4C6Q8NH72 309 aa14.02□□□□□ -0.17
HDAC6-220ENST00000477528 ZNF675Q8TD23 568 aa14.02□□□□□ -0.17
HDAC6-220ENST00000477528 TEX37Q96LM6 180 aa14.02□□□□□ -0.17
HDAC6-220ENST00000477528 CPPED1Q9BRF8 314 aaPredicted RBP14.02□□□□□ -0.17
HDAC6-220ENST00000477528 PELI2Q9HAT8 420 aa14.02□□□□□ -0.17
HDAC6-220ENST00000477528 POLMQ9NP87 494 aaPredicted RBP14.02□□□□□ -0.17
HDAC6-220ENST00000477528 DMRT3Q9NQL9 472 aa14.02□□□□□ -0.17
HDAC6-220ENST00000477528 DKK3Q9UBP4 350 aa14.02□□□□□ -0.17
HDAC6-220ENST00000477528 TFECO14948 347 aaPredicted RBP14.01□□□□□ -0.17
HDAC6-220ENST00000477528 AZGP1P25311 298 aaKnown RBP14.01□□□□□ -0.17
HDAC6-220ENST00000477528 SELENOWP63302 87 aa14.01□□□□□ -0.17
HDAC6-220ENST00000477528 MAGED1Q9Y5V3 778 aaPredicted RBP14.01□□□□□ -0.17
HDAC6-220ENST00000477528 KLK8O60259 260 aa14.01□□□□□ -0.17
HDAC6-220ENST00000477528 CDK5R2Q13319 367 aa14.01□□□□□ -0.17
HDAC6-220ENST00000477528 RUNX3Q13761 415 aa14.01□□□□□ -0.17
HDAC6-220ENST00000477528 GPR68Q15743 365 aa14.01□□□□□ -0.17
HDAC6-220ENST00000477528 TMEM35AQ53FP2 167 aa14.01□□□□□ -0.17
HDAC6-220ENST00000477528 PLET1Q6UQ28 207 aa14.01□□□□□ -0.17
HDAC6-220ENST00000477528 BCL7CQ8WUZ0 217 aaPredicted RBP14.01□□□□□ -0.17
HDAC6-220ENST00000477528 TBC1D17Q9HA65 648 aa14.01□□□□□ -0.17
HDAC6-220ENST00000477528 TBCCD1Q9NVR7 557 aa14.01□□□□□ -0.17
HDAC6-220ENST00000477528 H3BMQ9 156 aa14.01□□□□□ -0.17
HDAC6-220ENST00000477528 IDH3BO43837 385 aa14.01□□□□□ -0.17
HDAC6-220ENST00000477528 SLC25A12O75746 678 aa14.01□□□□□ -0.17
HDAC6-220ENST00000477528 CHRM5P08912 532 aaPredicted RBP14.01□□□□□ -0.17
HDAC6-220ENST00000477528 CEBPBP17676 345 aa14.01□□□□□ -0.17
HDAC6-220ENST00000477528 IL18Q14116 193 aa14.01□□□□□ -0.17
HDAC6-220ENST00000477528 NHSL2Q5HYW2 709 aa14.01□□□□□ -0.17
HDAC6-220ENST00000477528 SMARCD3Q6STE5 483 aa14.01□□□□□ -0.17
HDAC6-220ENST00000477528 RFLNAQ6ZTI6 216 aa14.01□□□□□ -0.17
HDAC6-220ENST00000477528 TCEANCQ8N8B7 351 aa14.01□□□□□ -0.17
HDAC6-220ENST00000477528 COG8Q96MW5 612 aa14.01□□□□□ -0.17
HDAC6-220ENST00000477528 IFT27Q9BW83 186 aa14.01□□□□□ -0.17
HDAC6-220ENST00000477528 ZBP1Q9H171 429 aa14.01□□□□□ -0.17
HDAC6-220ENST00000477528 MMP27Q9H306 513 aa14.01□□□□□ -0.17
HDAC6-220ENST00000477528 ABCB9Q9NP78 766 aa14.01□□□□□ -0.17
HDAC6-220ENST00000477528 DNAJC27Q9NZQ0 273 aa14.01□□□□□ -0.17
HDAC6-220ENST00000477528 GABRR3A8MPY1 467 aa14.01□□□□□ -0.17
HDAC6-220ENST00000477528 CCNKO75909 580 aa14.01□□□□□ -0.17
HDAC6-220ENST00000477528 SNX4O95219 450 aa14.01□□□□□ -0.17
HDAC6-220ENST00000477528 ALPLP05186 524 aa14.01□□□□□ -0.17
HDAC6-220ENST00000477528 CRISP1P54107 249 aa14.01□□□□□ -0.17
HDAC6-220ENST00000477528 SLC13A2Q13183 592 aa14.01□□□□□ -0.17
HDAC6-220ENST00000477528 CST6Q15828 149 aa14.01□□□□□ -0.17
HDAC6-220ENST00000477528 AAK1Q2M2I8 961 aa14.01□□□□□ -0.17
HDAC6-220ENST00000477528 ZNF367Q7RTV3 350 aa14.01□□□□□ -0.17
HDAC6-220ENST00000477528 TRIM63Q969Q1 353 aa14.01□□□□□ -0.17
HDAC6-220ENST00000477528 OR2M4Q96R27 311 aa14.01□□□□□ -0.17
HDAC6-220ENST00000477528 NECTIN3Q9NQS3 549 aa14.01□□□□□ -0.17
HDAC6-220ENST00000477528 FEZF1A0PJY2 475 aa14□□□□□ -0.17
HDAC6-220ENST00000477528 RYKP34925 604 aa14□□□□□ -0.17
HDAC6-220ENST00000477528 HMBOX1Q6NT76 420 aa14□□□□□ -0.17
HDAC6-220ENST00000477528 TUBA3EQ6PEY2 450 aa14□□□□□ -0.17
HDAC6-220ENST00000477528 LCTLQ6UWM7 567 aa14□□□□□ -0.17
HDAC6-220ENST00000477528 IQCHQ86VS3 1027 aa14□□□□□ -0.17
HDAC6-220ENST00000477528 CCDC116Q8IYX3 515 aa14□□□□□ -0.17
HDAC6-220ENST00000477528 KCTD7Q96MP8 289 aa14□□□□□ -0.17
HDAC6-220ENST00000477528 BTBD1Q9H0C5 482 aa14□□□□□ -0.17
HDAC6-220ENST00000477528 ANKRA2Q9H9E1 313 aa14□□□□□ -0.17
HDAC6-220ENST00000477528 PCDHGA8Q9Y5G5 932 aa14□□□□□ -0.17
HDAC6-220ENST00000477528 SH3PXD2BA1X283 911 aa14□□□□□ -0.17
HDAC6-220ENST00000477528 TACR1P25103 407 aa14□□□□□ -0.17
HDAC6-220ENST00000477528 CTGFP29279 349 aa14□□□□□ -0.17
HDAC6-220ENST00000477528 TRAM2Q15035 370 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms