RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 ZNF683Q8IZ20 524 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 ZNF444Q8N0Y2 327 aaPredicted RBP2.73□□□□□ -1.97
HMGN4-202ENST00000477243 PAQR4Q8N4S7 273 aaPredicted RBP2.73□□□□□ -1.97
HMGN4-202ENST00000477243 ZNF276Q8N554 614 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 ANKRD13CQ8N6S4 541 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 ANKFN1Q8N957 763 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 EXD3Q8N9H8 876 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 BOLLQ8N9W6 283 aaKnown RBP2.73□□□□□ -1.97
HMGN4-202ENST00000477243 SCCPDHQ8NBX0 429 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 NUDT10Q8NFP7 164 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 OR56A1Q8NGH5 318 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 OR52N2Q8NGI0 321 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 RP9Q8TA86 221 aaKnown RBP2.73□□□□□ -1.97
HMGN4-202ENST00000477243 SHKBP1Q8TBC3 707 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 LRRC20Q8TCA0 184 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 LKAAEAR1Q8TD35 194 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 CD300LFQ8TDQ1 290 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 GLYATL2Q8WU03 294 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 ASZ1Q8WWH4 475 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 ZNF775Q96BV0 537 aaPredicted RBP2.73□□□□□ -1.97
HMGN4-202ENST00000477243 NUDT11Q96G61 164 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 LOXL4Q96JB6 756 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 PRMT6Q96LA8 375 aaPredicted RBP2.73□□□□□ -1.97
HMGN4-202ENST00000477243 INPP4AQ96PE3 977 aaPredicted RBP2.73□□□□□ -1.97
HMGN4-202ENST00000477243 VPS35Q96QK1 796 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 PRR25Q96S07 402 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 RAB40CQ96S21 281 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 CBWD1Q9BRT8 395 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 CHRDL1Q9BU40 450 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 TM6SF1Q9BZW5 370 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 SPRTNQ9H040 489 aaPredicted RBP2.73□□□□□ -1.97
HMGN4-202ENST00000477243 KLC2Q9H0B6 622 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 SLC6A17Q9H1V8 727 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 MARCH7Q9H992 704 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 CYP3A43Q9HB55 503 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 ZFP14Q9HCL3 533 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 MYNNQ9NPC7 610 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 MKKSQ9NPJ1 570 aaPredicted RBP2.73□□□□□ -1.97
HMGN4-202ENST00000477243 SDHAF3Q9NRP4 125 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 ACOXLQ9NUZ1 547 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 RDH8Q9NYR8 311 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 SEMA5BQ9P283 1151 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 GMPR2Q9P2T1 348 aaKnown RBP2.73□□□□□ -1.97
HMGN4-202ENST00000477243 ERVK-18Q9QC07 812 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 MBD2Q9UBB5 411 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 SERGEFQ9UGK8 458 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 KCNE5Q9UJ90 142 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 RNF150Q9ULK6 438 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 FZD10Q9ULW2 581 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 PCDHA7Q9UN72 937 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 PCDHA12Q9UN75 941 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 GAB2Q9UQC2 676 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 RUVBL2Q9Y230 463 aaKnown RBP2.73□□□□□ -1.97
HMGN4-202ENST00000477243 IFT52Q9Y366 437 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 HEMK1Q9Y5R4 338 aaPredicted RBP2.73□□□□□ -1.97
HMGN4-202ENST00000477243 WNT6Q9Y6F9 365 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 OAS3Q9Y6K5 1087 aaKnown RBP2.73□□□□□ -1.97
HMGN4-202ENST00000477243 A3GALT2U3KPV4 340 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 CASKIN1Q8WXD9 1431 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 FRYLO94915 3013 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 CELSR1Q9NYQ6 3014 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 FREM2Q5SZK8 3169 aa2.73□□□□□ -1.97
HMGN4-202ENST00000477243 ZNF536O15090 1300 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 EMSYQ7Z589 1322 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 BSNQ9UPA5 3926 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 CRYBG3Q68DQ2 2970 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.72□□□□□ -1.97
HMGN4-202ENST00000477243 TRAV24A0A0B4J272 114 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 TRAV25A0A0B4J276 109 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 A0A0U1RQF3 1178 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 TMEM221A6NGB7 291 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 SRRM3A6NNA2 597 aaPredicted RBP2.72□□□□□ -1.97
HMGN4-202ENST00000477243 C12orf71A8MTZ7 269 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 HEPACAM2A8MVW5 462 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 ANKRD66B4E2M5 251 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 PPIAL4DF5H284 164 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 NPIPA3F8WFD2 350 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 M0QZ24 198 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 M0R296 226 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 VCYO14598 125 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 PRYO14603 147 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 ARPC3O15145 178 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 MDM4O15151 490 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 MSI1O43347 362 aaKnown RBP2.72□□□□□ -1.97
HMGN4-202ENST00000477243 ATP2C2O75185 946 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 UFL1O94874 794 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 SORBS2O94875 1100 aaKnown RBP2.72□□□□□ -1.97
HMGN4-202ENST00000477243 KLHL2O95198 593 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 ECDO95905 644 aaPredicted RBP2.72□□□□□ -1.97
HMGN4-202ENST00000477243 CLPTM1O96005 669 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 MBP02144 154 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 GCP02774 474 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 CA3P07451 260 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 IL6RP08887 468 aaPredicted RBP2.72□□□□□ -1.97
HMGN4-202ENST00000477243 CD63P08962 238 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 AKR1A1P14550 325 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 GP9P14770 177 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 BMP7P18075 431 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 SRMP19623 302 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 HNF1AP20823 631 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms