RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 RUNX2Q13950 521 aa13.59□□□□□ -0.23
CCNL1-217ENST00000476367 MFSD4BQ5TF39 518 aa13.59□□□□□ -0.23
CCNL1-217ENST00000476367 VWA5B1Q5TIE3 1220 aa13.59□□□□□ -0.23
CCNL1-217ENST00000476367 FAM47EQ6ZV65 393 aa13.59□□□□□ -0.23
CCNL1-217ENST00000476367 WDR75Q8IWA0 830 aaKnown RBP13.59□□□□□ -0.23
CCNL1-217ENST00000476367 ZC3H7AQ8IWR0 971 aaKnown RBP13.59□□□□□ -0.23
CCNL1-217ENST00000476367 METTL4Q8N3J2 472 aa13.59□□□□□ -0.23
CCNL1-217ENST00000476367 OR51Q1Q8NH59 317 aa13.59□□□□□ -0.23
CCNL1-217ENST00000476367 DYDC1Q8WWB3 177 aa13.59□□□□□ -0.23
CCNL1-217ENST00000476367 PEX11GQ96HA9 241 aa13.59□□□□□ -0.23
CCNL1-217ENST00000476367 CRB3Q9BUF7 120 aa13.59□□□□□ -0.23
CCNL1-217ENST00000476367 FAM117AQ9C073 453 aa13.59□□□□□ -0.23
CCNL1-217ENST00000476367 COPS7BQ9H9Q2 264 aaPredicted RBP13.59□□□□□ -0.23
CCNL1-217ENST00000476367 KCMF1Q9P0J7 381 aa13.59□□□□□ -0.23
CCNL1-217ENST00000476367 VPS29Q9UBQ0 182 aa13.59□□□□□ -0.23
CCNL1-217ENST00000476367 SLC12A4Q9UP95 1085 aa13.59□□□□□ -0.23
CCNL1-217ENST00000476367 ATMQ13315 3056 aa13.59□□□□□ -0.23
CCNL1-217ENST00000476367 IGLV3-12A0A075B6K2 115 aa13.58□□□□□ -0.24
CCNL1-217ENST00000476367 ATP6AP2A0A1C7CYW4 349 aa13.58□□□□□ -0.24
CCNL1-217ENST00000476367 VSTM2BA6NLU5 285 aa13.58□□□□□ -0.24
CCNL1-217ENST00000476367 TMPRSS11DO60235 418 aa13.58□□□□□ -0.24
CCNL1-217ENST00000476367 EDF1O60869 148 aaKnown RBP13.58□□□□□ -0.24
CCNL1-217ENST00000476367 ATP6AP2O75787 350 aa13.58□□□□□ -0.24
CCNL1-217ENST00000476367 GBAP04062 536 aa13.58□□□□□ -0.24
CCNL1-217ENST00000476367 PRR35P0CG20 571 aa13.58□□□□□ -0.24
CCNL1-217ENST00000476367 KITP10721 976 aa13.58□□□□□ -0.24
CCNL1-217ENST00000476367 PRPH2P23942 346 aa13.58□□□□□ -0.24
CCNL1-217ENST00000476367 ATP5A1P25705 553 aaKnown RBP13.58□□□□□ -0.24
CCNL1-217ENST00000476367 CERS1P27544 350 aa13.58□□□□□ -0.24
CCNL1-217ENST00000476367 TPP2P29144 1249 aaPredicted RBP13.58□□□□□ -0.24
CCNL1-217ENST00000476367 RAP1GDS1P52306 607 aa13.58□□□□□ -0.24
CCNL1-217ENST00000476367 TGM3Q08188 693 aa13.58□□□□□ -0.24
CCNL1-217ENST00000476367 PDCD2Q16342 344 aaPredicted RBP13.58□□□□□ -0.24
CCNL1-217ENST00000476367 UGT8Q16880 541 aa13.58□□□□□ -0.24
CCNL1-217ENST00000476367 DEFB109BQ30KR1 87 aa13.58□□□□□ -0.24
CCNL1-217ENST00000476367 TMEM35AQ53FP2 167 aa13.58□□□□□ -0.24
CCNL1-217ENST00000476367 MRM1Q6IN84 353 aaKnown RBP13.58□□□□□ -0.24
CCNL1-217ENST00000476367 RIPOR1Q6ZS17 1223 aa13.58□□□□□ -0.24
CCNL1-217ENST00000476367 RAB43Q86YS6 212 aa13.58□□□□□ -0.24
CCNL1-217ENST00000476367 PIWIL2Q8TC59 973 aaKnown RBP13.58□□□□□ -0.24
CCNL1-217ENST00000476367 SNRNP27Q8WVK2 155 aaKnown RBP13.58□□□□□ -0.24
CCNL1-217ENST00000476367 DDX31Q9H8H2 851 aaKnown RBP13.58□□□□□ -0.24
CCNL1-217ENST00000476367 C14orf105Q9NVL8 296 aa13.58□□□□□ -0.24
CCNL1-217ENST00000476367 LHX6Q9UPM6 363 aa13.58□□□□□ -0.24
CCNL1-217ENST00000476367 A0A088AWK7 358 aa13.57□□□□□ -0.24
CCNL1-217ENST00000476367 A0A0A6YYD5 115 aa13.57□□□□□ -0.24
CCNL1-217ENST00000476367 SDHDO14521 159 aa13.57□□□□□ -0.24
CCNL1-217ENST00000476367 CDC123O75794 336 aaPredicted RBP13.57□□□□□ -0.24
CCNL1-217ENST00000476367 SEMA3DO95025 777 aa13.57□□□□□ -0.24
CCNL1-217ENST00000476367 ZNF10P21506 573 aaPredicted RBP13.57□□□□□ -0.24
CCNL1-217ENST00000476367 HIST1H1TP22492 207 aaPredicted RBP13.57□□□□□ -0.24
CCNL1-217ENST00000476367 SSR2P43308 183 aa13.57□□□□□ -0.24
CCNL1-217ENST00000476367 HK2P52789 917 aa13.57□□□□□ -0.24
CCNL1-217ENST00000476367 MINDY4Q4G0A6 757 aa13.57□□□□□ -0.24
CCNL1-217ENST00000476367 RFTN2Q52LD8 501 aaPredicted RBP13.57□□□□□ -0.24
CCNL1-217ENST00000476367 FAAH2Q6GMR7 532 aa13.57□□□□□ -0.24
CCNL1-217ENST00000476367 OR4C11Q6IEV9 310 aa13.57□□□□□ -0.24
CCNL1-217ENST00000476367 NIPAL1Q6NVV3 410 aa13.57□□□□□ -0.24
CCNL1-217ENST00000476367 CHSY3Q70JA7 882 aa13.57□□□□□ -0.24
CCNL1-217ENST00000476367 COMMD6Q7Z4G1 85 aa13.57□□□□□ -0.24
CCNL1-217ENST00000476367 LAPTM4BQ86VI4 370 aa13.57□□□□□ -0.24
CCNL1-217ENST00000476367 GBP7Q8N8V2 638 aaPredicted RBP13.57□□□□□ -0.24
CCNL1-217ENST00000476367 ACOT4Q8N9L9 421 aa13.57□□□□□ -0.24
CCNL1-217ENST00000476367 ADAMTS17Q8TE56 1095 aa13.57□□□□□ -0.24
CCNL1-217ENST00000476367 C19orf60Q96EN9 201 aa13.57□□□□□ -0.24
CCNL1-217ENST00000476367 FCRL1Q96LA6 429 aa13.57□□□□□ -0.24
CCNL1-217ENST00000476367 PPP1R36Q96LQ0 422 aa13.57□□□□□ -0.24
CCNL1-217ENST00000476367 KCNC2Q96PR1 638 aa13.57□□□□□ -0.24
CCNL1-217ENST00000476367 SERPINI1Q99574 410 aa13.57□□□□□ -0.24
CCNL1-217ENST00000476367 NUF2Q9BZD4 464 aa13.57□□□□□ -0.24
CCNL1-217ENST00000476367 MEAF6Q9HAF1 191 aa13.57□□□□□ -0.24
CCNL1-217ENST00000476367 C3orf18Q9UK00 162 aa13.57□□□□□ -0.24
CCNL1-217ENST00000476367 POLHQ9Y253 713 aa13.57□□□□□ -0.24
CCNL1-217ENST00000476367 MAN2B2Q9Y2E5 1009 aa13.57□□□□□ -0.24
CCNL1-217ENST00000476367 IDSB3KWA1 339 aa13.57□□□□□ -0.24
CCNL1-217ENST00000476367 CHST10O43529 356 aa13.57□□□□□ -0.24
CCNL1-217ENST00000476367 B3GALT2O43825 422 aa13.57□□□□□ -0.24
CCNL1-217ENST00000476367 CRCPO75575 148 aa13.57□□□□□ -0.24
CCNL1-217ENST00000476367 BMP10O95393 424 aa13.57□□□□□ -0.24
CCNL1-217ENST00000476367 ALOX15P16050 662 aaPredicted RBP13.57□□□□□ -0.24
CCNL1-217ENST00000476367 ARFIP1P53367 373 aa13.57□□□□□ -0.24
CCNL1-217ENST00000476367 MTTPP55157 894 aa13.57□□□□□ -0.24
CCNL1-217ENST00000476367 ATP1A4Q13733 1029 aa13.57□□□□□ -0.24
CCNL1-217ENST00000476367 CRTC2Q53ET0 693 aaPredicted RBP13.57□□□□□ -0.24
CCNL1-217ENST00000476367 GALNT18Q6P9A2 607 aa13.57□□□□□ -0.24
CCNL1-217ENST00000476367 MRGPREQ86SM8 312 aa13.57□□□□□ -0.24
CCNL1-217ENST00000476367 C1orf52Q8N6N3 182 aaKnown RBP13.57□□□□□ -0.24
CCNL1-217ENST00000476367 TMEM52Q8NDY8 209 aa13.57□□□□□ -0.24
CCNL1-217ENST00000476367 EXTL1Q92935 676 aa13.57□□□□□ -0.24
CCNL1-217ENST00000476367 UCN3Q969E3 161 aa13.57□□□□□ -0.24
CCNL1-217ENST00000476367 RGMAQ96B86 450 aa13.57□□□□□ -0.24
CCNL1-217ENST00000476367 MAELQ96JY0 434 aaKnown RBP13.57□□□□□ -0.24
CCNL1-217ENST00000476367 MESP1Q9BRJ9 268 aa13.57□□□□□ -0.24
CCNL1-217ENST00000476367 CENPKQ9BS16 269 aa13.57□□□□□ -0.24
CCNL1-217ENST00000476367 TBCDQ9BTW9 1192 aa13.57□□□□□ -0.24
CCNL1-217ENST00000476367 KCNK13Q9HB14 408 aa13.57□□□□□ -0.24
CCNL1-217ENST00000476367 SIRT5Q9NXA8 310 aa13.57□□□□□ -0.24
CCNL1-217ENST00000476367 MKL2Q9ULH7 1088 aa13.57□□□□□ -0.24
CCNL1-217ENST00000476367 DLGAP4Q9Y2H0 992 aa13.57□□□□□ -0.24
CCNL1-217ENST00000476367 ASB4Q9Y574 426 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms