RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 COX7A2P14406 83 aa17.15■□□□□ 0.34
ATG4B-217ENST00000475693 HIST1H1TP22492 207 aaPredicted RBP17.15■□□□□ 0.34
ATG4B-217ENST00000475693 TGM1P22735 817 aa17.15■□□□□ 0.34
ATG4B-217ENST00000475693 PTGER1P34995 402 aa17.15■□□□□ 0.34
ATG4B-217ENST00000475693 MSX2P35548 267 aaPredicted RBP17.15■□□□□ 0.34
ATG4B-217ENST00000475693 MRPL19P49406 292 aaKnown RBP17.15■□□□□ 0.34
ATG4B-217ENST00000475693 PWP1Q13610 501 aa17.15■□□□□ 0.34
ATG4B-217ENST00000475693 HERC3Q15034 1050 aa17.15■□□□□ 0.34
ATG4B-217ENST00000475693 C18orf63Q68DL7 685 aa17.15■□□□□ 0.34
ATG4B-217ENST00000475693 TMEM71Q6P5X7 295 aa17.15■□□□□ 0.34
ATG4B-217ENST00000475693 WDR74Q6RFH5 385 aaPredicted RBP17.15■□□□□ 0.34
ATG4B-217ENST00000475693 NUDT13Q86X67 352 aa17.15■□□□□ 0.34
ATG4B-217ENST00000475693 TMEM132CQ8N3T6 1108 aa17.15■□□□□ 0.34
ATG4B-217ENST00000475693 CAMKVQ8NCB2 501 aa17.15■□□□□ 0.34
ATG4B-217ENST00000475693 CIDECQ96AQ7 238 aaPredicted RBP17.15■□□□□ 0.34
ATG4B-217ENST00000475693 MAPKAP1Q9BPZ7 522 aa17.15■□□□□ 0.34
ATG4B-217ENST00000475693 INPP5KQ9BT40 448 aa17.15■□□□□ 0.34
ATG4B-217ENST00000475693 DDX31Q9H8H2 851 aaKnown RBP17.15■□□□□ 0.34
ATG4B-217ENST00000475693 NCDNQ9UBB6 729 aa17.15■□□□□ 0.34
ATG4B-217ENST00000475693 ASPMQ8IZT6 3477 aa17.15■□□□□ 0.34
ATG4B-217ENST00000475693 IGHV5-10-1A0A0J9YXX1 117 aa17.15■□□□□ 0.34
ATG4B-217ENST00000475693 A0A1W2PP18 115 aa17.15■□□□□ 0.34
ATG4B-217ENST00000475693 A0A1W2PS29 197 aa17.15■□□□□ 0.34
ATG4B-217ENST00000475693 CPNE6O95741 557 aa17.15■□□□□ 0.34
ATG4B-217ENST00000475693 GSNP06396 782 aa17.15■□□□□ 0.34
ATG4B-217ENST00000475693 PNLIPP16233 465 aa17.15■□□□□ 0.34
ATG4B-217ENST00000475693 STXBP1P61764 594 aaKnown RBP17.15■□□□□ 0.34
ATG4B-217ENST00000475693 ART3Q13508 389 aa17.15■□□□□ 0.34
ATG4B-217ENST00000475693 LIN52Q52LA3 116 aa17.15■□□□□ 0.34
ATG4B-217ENST00000475693 FAM71E1Q6IPT2 247 aa17.15■□□□□ 0.34
ATG4B-217ENST00000475693 ST13P4Q8IZP2 240 aaPredicted RBP17.15■□□□□ 0.34
ATG4B-217ENST00000475693 KCNC2Q96PR1 638 aa17.15■□□□□ 0.34
ATG4B-217ENST00000475693 OR52E6Q96RD3 313 aa17.15■□□□□ 0.34
ATG4B-217ENST00000475693 EFCAB1Q9HAE3 211 aa17.15■□□□□ 0.34
ATG4B-217ENST00000475693 MN1Q10571 1320 aaPredicted RBP17.14■□□□□ 0.33
ATG4B-217ENST00000475693 TMEM150CB9EJG8 249 aa17.14■□□□□ 0.33
ATG4B-217ENST00000475693 SGK494L7N484 410 aa17.14■□□□□ 0.33
ATG4B-217ENST00000475693 CASQ2O14958 399 aaPredicted RBP17.14■□□□□ 0.33
ATG4B-217ENST00000475693 FAM58BPP0C7Q3 252 aa17.14■□□□□ 0.33
ATG4B-217ENST00000475693 UBTFL6P0CB48 400 aaPredicted RBP17.14■□□□□ 0.33
ATG4B-217ENST00000475693 ARL4DP49703 201 aa17.14■□□□□ 0.33
ATG4B-217ENST00000475693 ERFP50548 548 aa17.14■□□□□ 0.33
ATG4B-217ENST00000475693 HSD11B2P80365 405 aa17.14■□□□□ 0.33
ATG4B-217ENST00000475693 RUNX2Q13950 521 aa17.14■□□□□ 0.33
ATG4B-217ENST00000475693 MPEG1Q2M385 716 aa17.14■□□□□ 0.33
ATG4B-217ENST00000475693 GTDC1Q4AE62 458 aa17.14■□□□□ 0.33
ATG4B-217ENST00000475693 TMEM35AQ53FP2 167 aa17.14■□□□□ 0.33
ATG4B-217ENST00000475693 TMEM214Q6NUQ4 689 aaKnown RBP17.14■□□□□ 0.33
ATG4B-217ENST00000475693 CLECL1Q8IZS7 167 aa17.14■□□□□ 0.33
ATG4B-217ENST00000475693 CLEC4FQ8N1N0 589 aa17.14■□□□□ 0.33
ATG4B-217ENST00000475693 OR9A4Q8NGU2 314 aa17.14■□□□□ 0.33
ATG4B-217ENST00000475693 BTBD9Q96Q07 612 aa17.14■□□□□ 0.33
ATG4B-217ENST00000475693 ZBTB18Q99592 522 aa17.14■□□□□ 0.33
ATG4B-217ENST00000475693 VCX3AQ9NNX9 186 aa17.14■□□□□ 0.33
ATG4B-217ENST00000475693 SIRT5Q9NXA8 310 aa17.14■□□□□ 0.33
ATG4B-217ENST00000475693 NAALAD2Q9Y3Q0 740 aa17.14■□□□□ 0.33
ATG4B-217ENST00000475693 SEC16AO15027 2179 aa17.14■□□□□ 0.33
ATG4B-217ENST00000475693 MYOCOSA0A1B0GUC4 107 aa17.13■□□□□ 0.33
ATG4B-217ENST00000475693 A0A1W2PR48 441 aa17.13■□□□□ 0.33
ATG4B-217ENST00000475693 SCAMP2O15127 329 aaKnown RBP17.13■□□□□ 0.33
ATG4B-217ENST00000475693 PGRMC2O15173 223 aa17.13■□□□□ 0.33
ATG4B-217ENST00000475693 FKBP9O95302 570 aa17.13■□□□□ 0.33
ATG4B-217ENST00000475693 BAG2O95816 211 aa17.13■□□□□ 0.33
ATG4B-217ENST00000475693 SMIM10L1P0DMW3 83 aa17.13■□□□□ 0.33
ATG4B-217ENST00000475693 CKMT2P17540 419 aa17.13■□□□□ 0.33
ATG4B-217ENST00000475693 PRPS1L1P21108 318 aa17.13■□□□□ 0.33
ATG4B-217ENST00000475693 CDKN2CP42773 168 aa17.13■□□□□ 0.33
ATG4B-217ENST00000475693 POLE2P56282 527 aa17.13■□□□□ 0.33
ATG4B-217ENST00000475693 WNT3P56703 355 aa17.13■□□□□ 0.33
ATG4B-217ENST00000475693 STX5Q13190 355 aa17.13■□□□□ 0.33
ATG4B-217ENST00000475693 ZNF750Q32MQ0 723 aa17.13■□□□□ 0.33
ATG4B-217ENST00000475693 TICAM1Q8IUC6 712 aa17.13■□□□□ 0.33
ATG4B-217ENST00000475693 ZNF655Q8N720 491 aaPredicted RBP17.13■□□□□ 0.33
ATG4B-217ENST00000475693 OR6C4Q8NGE1 309 aa17.13■□□□□ 0.33
ATG4B-217ENST00000475693 NAT6Q93015 286 aa17.13■□□□□ 0.33
ATG4B-217ENST00000475693 DTNBP1Q96EV8 351 aa17.13■□□□□ 0.33
ATG4B-217ENST00000475693 SMIM10Q96HG1 83 aa17.13■□□□□ 0.33
ATG4B-217ENST00000475693 KLHL4Q9C0H6 718 aa17.13■□□□□ 0.33
ATG4B-217ENST00000475693 EPB41L1Q9H4G0 881 aa17.13■□□□□ 0.33
ATG4B-217ENST00000475693 TMEM9BQ9NQ34 198 aa17.13■□□□□ 0.33
ATG4B-217ENST00000475693 NDUFA13Q9P0J0 144 aa17.13■□□□□ 0.33
ATG4B-217ENST00000475693 COMMD3-BMI1R4GMX3 469 aa17.13■□□□□ 0.33
ATG4B-217ENST00000475693 A0A0A6YYC8 382 aaPredicted RBP17.13■□□□□ 0.33
ATG4B-217ENST00000475693 I3L1I5 382 aaPredicted RBP17.13■□□□□ 0.33
ATG4B-217ENST00000475693 PDE5AO76074 875 aa17.13■□□□□ 0.33
ATG4B-217ENST00000475693 PABPC4LP0CB38 370 aaKnown RBP17.13■□□□□ 0.33
ATG4B-217ENST00000475693 ZNF883P0CG24 379 aa17.13■□□□□ 0.33
ATG4B-217ENST00000475693 UQCRBP14927 111 aa17.13■□□□□ 0.33
ATG4B-217ENST00000475693 GSTT1P30711 240 aa17.13■□□□□ 0.33
ATG4B-217ENST00000475693 S100A3P33764 101 aa17.13■□□□□ 0.33
ATG4B-217ENST00000475693 SOX11P35716 441 aa17.13■□□□□ 0.33
ATG4B-217ENST00000475693 MED21Q13503 144 aa17.13■□□□□ 0.33
ATG4B-217ENST00000475693 MAPRE2Q15555 327 aa17.13■□□□□ 0.33
ATG4B-217ENST00000475693 ZC3H12BQ5HYM0 836 aaKnown RBP17.13■□□□□ 0.33
ATG4B-217ENST00000475693 C6orf10Q5SRN2 563 aa17.13■□□□□ 0.33
ATG4B-217ENST00000475693 PAGE2Q7Z2X7 111 aa17.13■□□□□ 0.33
ATG4B-217ENST00000475693 ARHGEF39Q8N4T4 335 aa17.13■□□□□ 0.33
ATG4B-217ENST00000475693 OR1L3Q8NH93 324 aa17.13■□□□□ 0.33
ATG4B-217ENST00000475693 DNAJB14Q8TBM8 379 aa17.13■□□□□ 0.33
ATG4B-217ENST00000475693 GAL3ST3Q96A11 431 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms