RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 RGS14O43566 566 aa14.8□□□□□ -0.04
CPSF3-203ENST00000475482 SORBS2O94875 1100 aaKnown RBP14.8□□□□□ -0.04
CPSF3-203ENST00000475482 EZRP15311 586 aaKnown RBP14.8□□□□□ -0.04
CPSF3-203ENST00000475482 CXCR2P25025 360 aa14.8□□□□□ -0.04
CPSF3-203ENST00000475482 OR1D4P47884 311 aa14.8□□□□□ -0.04
CPSF3-203ENST00000475482 FOXA1P55317 472 aa14.8□□□□□ -0.04
CPSF3-203ENST00000475482 IGFBP7Q16270 282 aa14.8□□□□□ -0.04
CPSF3-203ENST00000475482 GRHL2Q6ISB3 625 aa14.8□□□□□ -0.04
CPSF3-203ENST00000475482 C17orf64Q86WR6 236 aa14.8□□□□□ -0.04
CPSF3-203ENST00000475482 PARP9Q8IXQ6 854 aa14.8□□□□□ -0.04
CPSF3-203ENST00000475482 SLC5A11Q8WWX8 675 aa14.8□□□□□ -0.04
CPSF3-203ENST00000475482 MVB12AQ96EY5 273 aa14.8□□□□□ -0.04
CPSF3-203ENST00000475482 KCNA7Q96RP8 456 aa14.8□□□□□ -0.04
CPSF3-203ENST00000475482 PITHD1Q9GZP4 211 aaPredicted RBP14.8□□□□□ -0.04
CPSF3-203ENST00000475482 MYLK2Q9H1R3 596 aa14.8□□□□□ -0.04
CPSF3-203ENST00000475482 GPR83Q9NYM4 423 aa14.8□□□□□ -0.04
CPSF3-203ENST00000475482 C5AR2Q9P296 337 aa14.8□□□□□ -0.04
CPSF3-203ENST00000475482 CTSFQ9UBX1 484 aa14.8□□□□□ -0.04
CPSF3-203ENST00000475482 RNF11Q9Y3C5 154 aa14.8□□□□□ -0.04
CPSF3-203ENST00000475482 PCDHGA11Q9Y5H2 935 aa14.8□□□□□ -0.04
CPSF3-203ENST00000475482 HS3ST3B1Q9Y662 390 aa14.8□□□□□ -0.04
CPSF3-203ENST00000475482 A0A1B0GTL3 188 aa14.79□□□□□ -0.04
CPSF3-203ENST00000475482 CLEC18AA5D8T8 446 aa14.79□□□□□ -0.04
CPSF3-203ENST00000475482 E9PBE3 544 aa14.79□□□□□ -0.04
CPSF3-203ENST00000475482 SOCS6O14544 535 aa14.79□□□□□ -0.04
CPSF3-203ENST00000475482 UBDO15205 165 aa14.79□□□□□ -0.04
CPSF3-203ENST00000475482 KLHL41O60662 606 aa14.79□□□□□ -0.04
CPSF3-203ENST00000475482 WFS1O76024 890 aa14.79□□□□□ -0.04
CPSF3-203ENST00000475482 LINC00032P0C843 101 aa14.79□□□□□ -0.04
CPSF3-203ENST00000475482 C1GALT1C1LP0DN25 315 aa14.79□□□□□ -0.04
CPSF3-203ENST00000475482 NPPBP16860 134 aa14.79□□□□□ -0.04
CPSF3-203ENST00000475482 LBPP18428 481 aa14.79□□□□□ -0.04
CPSF3-203ENST00000475482 EPORP19235 508 aa14.79□□□□□ -0.04
CPSF3-203ENST00000475482 RASSF2P50749 326 aa14.79□□□□□ -0.04
CPSF3-203ENST00000475482 STX1BP61266 288 aa14.79□□□□□ -0.04
CPSF3-203ENST00000475482 PHEXP78562 749 aa14.79□□□□□ -0.04
CPSF3-203ENST00000475482 MAD2L1Q13257 205 aaPredicted RBP14.79□□□□□ -0.04
CPSF3-203ENST00000475482 MYBPC3Q14896 1274 aa14.79□□□□□ -0.04
CPSF3-203ENST00000475482 KRT72Q14CN4 511 aa14.79□□□□□ -0.04
CPSF3-203ENST00000475482 CPSF6Q16630 551 aaKnown RBP eCLIP14.79□□□□□ -0.04
CPSF3-203ENST00000475482 IMPG1Q17R60 797 aa14.79□□□□□ -0.04
CPSF3-203ENST00000475482 MUM1Q2TAK8 710 aa14.79□□□□□ -0.04
CPSF3-203ENST00000475482 SMU1Q2TAY7 513 aa14.79□□□□□ -0.04
CPSF3-203ENST00000475482 XKR7Q5GH72 579 aa14.79□□□□□ -0.04
CPSF3-203ENST00000475482 COLEC12Q5KU26 742 aa14.79□□□□□ -0.04
CPSF3-203ENST00000475482 ATG9BQ674R7 924 aa14.79□□□□□ -0.04
CPSF3-203ENST00000475482 CLEC18BQ6UXF7 455 aa14.79□□□□□ -0.04
CPSF3-203ENST00000475482 LARP4Q71RC2 724 aaKnown RBP eCLIP14.79□□□□□ -0.04
CPSF3-203ENST00000475482 SPATA19Q7Z5L4 167 aa14.79□□□□□ -0.04
CPSF3-203ENST00000475482 KRT78Q8N1N4 520 aa14.79□□□□□ -0.04
CPSF3-203ENST00000475482 RBMXL3Q8N7X1 1067 aaKnown RBP14.79□□□□□ -0.04
CPSF3-203ENST00000475482 CLEC18CQ8NCF0 446 aa14.79□□□□□ -0.04
CPSF3-203ENST00000475482 WDR34Q96EX3 536 aa14.79□□□□□ -0.04
CPSF3-203ENST00000475482 PPP3R2Q96LZ3 170 aa14.79□□□□□ -0.04
CPSF3-203ENST00000475482 OR4K3Q96R72 315 aa14.79□□□□□ -0.04
CPSF3-203ENST00000475482 OR52B2Q96RD2 323 aa14.79□□□□□ -0.04
CPSF3-203ENST00000475482 NMUR2Q9GZQ4 415 aa14.79□□□□□ -0.04
CPSF3-203ENST00000475482 ZNF304Q9HCX3 659 aa14.79□□□□□ -0.04
CPSF3-203ENST00000475482 CUEDC1Q9NWM3 386 aaPredicted RBP14.79□□□□□ -0.04
CPSF3-203ENST00000475482 ZNF490Q9ULM2 529 aaPredicted RBP14.79□□□□□ -0.04
CPSF3-203ENST00000475482 HECTD1Q9ULT8 2610 aa14.79□□□□□ -0.04
CPSF3-203ENST00000475482 RUVBL1Q9Y265 456 aaKnown RBP14.79□□□□□ -0.04
CPSF3-203ENST00000475482 USP9XQ93008 2570 aaPredicted RBP14.79□□□□□ -0.04
CPSF3-203ENST00000475482 KCNE1BA0A087WTH5 132 aa14.78□□□□□ -0.04
CPSF3-203ENST00000475482 SERTM1A2A2V5 107 aa14.78□□□□□ -0.04
CPSF3-203ENST00000475482 H0YIV9 168 aa14.78□□□□□ -0.04
CPSF3-203ENST00000475482 MANBAO00462 879 aa14.78□□□□□ -0.04
CPSF3-203ENST00000475482 PEX12O00623 359 aa14.78□□□□□ -0.04
CPSF3-203ENST00000475482 JUNP05412 331 aaKnown RBP14.78□□□□□ -0.04
CPSF3-203ENST00000475482 HSD3B1P14060 373 aa14.78□□□□□ -0.04
CPSF3-203ENST00000475482 HRH2P25021 359 aa14.78□□□□□ -0.04
CPSF3-203ENST00000475482 HSD3B2P26439 372 aa14.78□□□□□ -0.04
CPSF3-203ENST00000475482 MNAT1P51948 309 aa14.78□□□□□ -0.04
CPSF3-203ENST00000475482 DOC2AQ14183 400 aa14.78□□□□□ -0.04
CPSF3-203ENST00000475482 E2F2Q14209 437 aa14.78□□□□□ -0.04
CPSF3-203ENST00000475482 ZRSR2Q15696 482 aaKnown RBP14.78□□□□□ -0.04
CPSF3-203ENST00000475482 NADK2Q4G0N4 442 aa14.78□□□□□ -0.04
CPSF3-203ENST00000475482 ATP6AP1LQ52LC2 224 aa14.78□□□□□ -0.04
CPSF3-203ENST00000475482 GARNL3Q5VVW2 1013 aa14.78□□□□□ -0.04
CPSF3-203ENST00000475482 FRG2Q64ET8 278 aa14.78□□□□□ -0.04
CPSF3-203ENST00000475482 OGFOD2Q6N063 350 aa14.78□□□□□ -0.04
CPSF3-203ENST00000475482 MED27Q6P2C8 311 aa14.78□□□□□ -0.04
CPSF3-203ENST00000475482 NXPE4Q6UWF7 544 aa14.78□□□□□ -0.04
CPSF3-203ENST00000475482 KIRREL2Q6UWL6 708 aa14.78□□□□□ -0.04
CPSF3-203ENST00000475482 IGFL3Q6UXB1 125 aa14.78□□□□□ -0.04
CPSF3-203ENST00000475482 SLCO4C1Q6ZQN7 724 aa14.78□□□□□ -0.04
CPSF3-203ENST00000475482 TRIM46Q7Z4K8 759 aa14.78□□□□□ -0.04
CPSF3-203ENST00000475482 TMPRSS11BQ86T26 416 aa14.78□□□□□ -0.04
CPSF3-203ENST00000475482 GALNT16Q8N428 558 aa14.78□□□□□ -0.04
CPSF3-203ENST00000475482 TBC1D19Q8N5T2 526 aa14.78□□□□□ -0.04
CPSF3-203ENST00000475482 CSNK1A1LQ8N752 337 aa14.78□□□□□ -0.04
CPSF3-203ENST00000475482 SELENOMQ8WWX9 145 aa14.78□□□□□ -0.04
CPSF3-203ENST00000475482 NEIL2Q969S2 332 aa14.78□□□□□ -0.04
CPSF3-203ENST00000475482 FRG2BQ96QU4 278 aa14.78□□□□□ -0.04
CPSF3-203ENST00000475482 TUBB1Q9H4B7 451 aa14.78□□□□□ -0.04
CPSF3-203ENST00000475482 ZNF552Q9H707 407 aaPredicted RBP14.78□□□□□ -0.04
CPSF3-203ENST00000475482 AKTIPQ9H8T0 292 aa14.78□□□□□ -0.04
CPSF3-203ENST00000475482 PELI2Q9HAT8 420 aa14.78□□□□□ -0.04
CPSF3-203ENST00000475482 SEMA3GQ9NS98 782 aa14.78□□□□□ -0.04
CPSF3-203ENST00000475482 TMEM184CQ9NVA4 438 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms