RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 KITP10721 976 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 SLC2A1P11166 492 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 ITGAMP11215 1152 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 C4BPBP20851 252 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 DNASE1P24855 282 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 APOBEC3AP31941 199 aaPredicted RBP5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 SERPINF1P36955 418 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 MC3RP41968 323 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 CDH13P55290 713 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 STARD6P59095 220 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 NKX6-1P78426 367 aaPredicted RBP5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 NHLH2Q02577 135 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 CSTF1Q05048 431 aaKnown RBP5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 MGAT2Q10469 447 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 TDGQ13569 410 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 FLYWCH1Q4VC44 716 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 NHSL2Q5HYW2 709 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 ACER2Q5QJU3 275 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 ANKRD22Q5VYY1 191 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 CIAPIN1Q6FI81 312 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 ZC3H14Q6PJT7 736 aaKnown RBP5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 TMPRSS11FQ6ZWK6 438 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 BMP8AQ7Z5Y6 402 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 PPP1R3BQ86XI6 285 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 TMC8Q8IU68 726 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 SKA3Q8IX90 412 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 RNF152Q8N8N0 203 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 CDYL2Q8N8U2 506 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 BPIFB6Q8NFQ5 453 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 SPATA22Q8NHS9 363 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 SNX33Q8WV41 574 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 TRAPPC12Q8WVT3 735 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 BRI3BPQ8WY22 251 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 ING5Q8WYH8 240 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 RAB24Q969Q5 203 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 TMBIM1Q969X1 311 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 FKBP10Q96AY3 582 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 TEPSINQ96N21 525 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 KCNA7Q96RP8 456 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 CYP2S1Q96SQ9 504 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 TMEM175Q9BSA9 504 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 TRIM31Q9BZY9 425 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 GPR88Q9GZN0 384 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 COPS7BQ9H9Q2 264 aaPredicted RBP5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 RANGRFQ9HD47 186 aaPredicted RBP5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 FAM49BQ9NUQ9 324 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 TMLHEQ9NVH6 421 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 TEX10Q9NXF1 929 aaPredicted RBP5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 FBXL12Q9NXK8 326 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 MED11Q9P086 117 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 VAPAQ9P0L0 249 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 DNAJB9Q9UBS3 223 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 SEC14L4Q9UDX3 406 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 APOBEC3BQ9UH17 382 aaKnown RBP5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 SLC23A1Q9UHI7 598 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 SCP2D1Q9UJQ7 156 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 ACSL6Q9UKU0 697 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 OGDHLQ9ULD0 1010 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 GPR34Q9UPC5 381 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 PUS1Q9Y606 427 aaKnown RBP eCLIP5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 RGPD5Q99666 1765 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 MON2Q7Z3U7 1717 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 BTAF1O14981 1849 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 KIF20BQ96Q89 1820 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 C2orf92A0A1B0GVN3 265 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 SERTM2A0A1B0GWG4 89 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 CIB4A0PJX0 185 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 SLC22A23A1A5C7 686 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 OR2AT4A6NND4 320 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 A8MXK9 166 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 KDM4EB2RXH2 506 aaPredicted RBP5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 B4E171 279 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 NPIPA2E9PIF3 369 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 F8VP50 259 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 GRM8O00222 908 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 TYROBPO43914 113 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 PLIN3O60664 434 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 SDC3O75056 442 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 GATBO75879 557 aaKnown RBP5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 SOAT2O75908 522 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 KRT33AO76009 404 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 ZFPL1O95159 310 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 VAPBO95292 243 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 IFNB1P01574 187 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 C9P02748 559 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 CHRNGP07510 517 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 GUSBP08236 651 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 SNRNP70P08621 437 aaKnown RBP5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 OR8G3PP0DMU2 310 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 MUC1P15941 1255 aaPredicted RBP5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 AHCYP23526 432 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 ACVR2AP27037 513 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 IL13P35225 146 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 CD96P40200 585 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 ETV6P41212 452 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 CDKN1BP46527 198 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 SLC1A6P48664 564 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 HSPA7P48741 367 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 CCR5P51681 352 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 BCAT1P54687 386 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms