RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 DVL2O14641 736 aa11.68□□□□□ -0.54
SKA3-206ENST00000475251 OR6B1O95007 311 aa11.68□□□□□ -0.54
SKA3-206ENST00000475251 RAF1P04049 648 aa11.68□□□□□ -0.54
SKA3-206ENST00000475251 P04436 131 aa11.68□□□□□ -0.54
SKA3-206ENST00000475251 F7P08709 466 aaPredicted RBP11.68□□□□□ -0.54
SKA3-206ENST00000475251 GSTM2P28161 218 aa11.68□□□□□ -0.54
SKA3-206ENST00000475251 SOX3P41225 446 aa11.68□□□□□ -0.54
SKA3-206ENST00000475251 MAGEA5P43359 124 aa11.68□□□□□ -0.54
SKA3-206ENST00000475251 KCNJ1P48048 391 aa11.68□□□□□ -0.54
SKA3-206ENST00000475251 GPR143P51810 404 aa11.68□□□□□ -0.54
SKA3-206ENST00000475251 IL2P60568 153 aa11.68□□□□□ -0.54
SKA3-206ENST00000475251 REEP5Q00765 189 aa11.68□□□□□ -0.54
SKA3-206ENST00000475251 LTBQ06643 244 aa11.68□□□□□ -0.54
SKA3-206ENST00000475251 TBL3Q12788 808 aaKnown RBP11.68□□□□□ -0.54
SKA3-206ENST00000475251 GPS1Q13098 491 aa11.68□□□□□ -0.54
SKA3-206ENST00000475251 RCN2Q14257 317 aa11.68□□□□□ -0.54
SKA3-206ENST00000475251 RBBP5Q15291 538 aaKnown RBP11.68□□□□□ -0.54
SKA3-206ENST00000475251 ELAVL1Q15717 326 aaKnown RBP11.68□□□□□ -0.54
SKA3-206ENST00000475251 HSPB2Q16082 182 aa11.68□□□□□ -0.54
SKA3-206ENST00000475251 HYAL4Q2M3T9 481 aa11.68□□□□□ -0.54
SKA3-206ENST00000475251 TOR1AIP1Q5JTV8 583 aa11.68□□□□□ -0.54
SKA3-206ENST00000475251 RTL6Q6ICC9 239 aa11.68□□□□□ -0.54
SKA3-206ENST00000475251 PAQR3Q6TCH7 311 aa11.68□□□□□ -0.54
SKA3-206ENST00000475251 OPN5Q6U736 354 aa11.68□□□□□ -0.54
SKA3-206ENST00000475251 CAND1Q86VP6 1230 aaKnown RBP11.68□□□□□ -0.54
SKA3-206ENST00000475251 LIX1LQ8IVB5 337 aa11.68□□□□□ -0.54
SKA3-206ENST00000475251 ZNF595Q8IYB9 648 aa11.68□□□□□ -0.54
SKA3-206ENST00000475251 TMEM251Q8N6I4 163 aa11.68□□□□□ -0.54
SKA3-206ENST00000475251 MORN4Q8NDC4 146 aa11.68□□□□□ -0.54
SKA3-206ENST00000475251 MCUQ8NE86 351 aa11.68□□□□□ -0.54
SKA3-206ENST00000475251 TTLQ8NG68 377 aa11.68□□□□□ -0.54
SKA3-206ENST00000475251 OR8K3Q8NH51 312 aa11.68□□□□□ -0.54
SKA3-206ENST00000475251 NEIL2Q969S2 332 aa11.68□□□□□ -0.54
SKA3-206ENST00000475251 GAL3ST3Q96A11 431 aa11.68□□□□□ -0.54
SKA3-206ENST00000475251 FBXL8Q96CD0 374 aa11.68□□□□□ -0.54
SKA3-206ENST00000475251 PWWP2AQ96N64 755 aa11.68□□□□□ -0.54
SKA3-206ENST00000475251 OR4K3Q96R72 315 aa11.68□□□□□ -0.54
SKA3-206ENST00000475251 RASL10BQ96S79 203 aa11.68□□□□□ -0.54
SKA3-206ENST00000475251 NDNQ99608 321 aa11.68□□□□□ -0.54
SKA3-206ENST00000475251 DESI2Q9BSY9 194 aa11.68□□□□□ -0.54
SKA3-206ENST00000475251 CRIM1Q9NZV1 1036 aa11.68□□□□□ -0.54
SKA3-206ENST00000475251 ABCA4P78363 2273 aa11.67□□□□□ -0.54
SKA3-206ENST00000475251 ATP6AP2A0A1C7CYW4 349 aa11.67□□□□□ -0.54
SKA3-206ENST00000475251 FAM171A2A8MVW0 826 aa11.67□□□□□ -0.54
SKA3-206ENST00000475251 WWP2O00308 870 aa11.67□□□□□ -0.54
SKA3-206ENST00000475251 B3GALT2O43825 422 aa11.67□□□□□ -0.54
SKA3-206ENST00000475251 ATP6AP2O75787 350 aa11.67□□□□□ -0.54
SKA3-206ENST00000475251 GOSR1O95249 250 aa11.67□□□□□ -0.54
SKA3-206ENST00000475251 FGGP02679 453 aa11.67□□□□□ -0.54
SKA3-206ENST00000475251 SAT1P21673 171 aa11.67□□□□□ -0.54
SKA3-206ENST00000475251 ADSLP30566 484 aaPredicted RBP11.67□□□□□ -0.54
SKA3-206ENST00000475251 ADH7P40394 386 aa11.67□□□□□ -0.54
SKA3-206ENST00000475251 ASCL1P50553 236 aa11.67□□□□□ -0.54
SKA3-206ENST00000475251 ZNF75DP51815 510 aa11.67□□□□□ -0.54
SKA3-206ENST00000475251 TERF1P54274 439 aa11.67□□□□□ -0.54
SKA3-206ENST00000475251 RAB38P57729 211 aa11.67□□□□□ -0.54
SKA3-206ENST00000475251 BTN3A2P78410 334 aa11.67□□□□□ -0.54
SKA3-206ENST00000475251 KEAP1Q14145 624 aa11.67□□□□□ -0.54
SKA3-206ENST00000475251 DEFB113Q30KQ7 82 aa11.67□□□□□ -0.54
SKA3-206ENST00000475251 HSP90AA5PQ58FG0 334 aa11.67□□□□□ -0.54
SKA3-206ENST00000475251 XKR6Q5GH73 641 aa11.67□□□□□ -0.54
SKA3-206ENST00000475251 TMPRSS11BQ86T26 416 aa11.67□□□□□ -0.54
SKA3-206ENST00000475251 FBXW8Q8N3Y1 598 aa11.67□□□□□ -0.54
SKA3-206ENST00000475251 ANKRD53Q8N9V6 530 aa11.67□□□□□ -0.54
SKA3-206ENST00000475251 C2CD4AQ8NCU7 369 aaPredicted RBP11.67□□□□□ -0.54
SKA3-206ENST00000475251 C7orf57Q8NEG2 295 aa11.67□□□□□ -0.54
SKA3-206ENST00000475251 OR5L2Q8NGL0 311 aa11.67□□□□□ -0.54
SKA3-206ENST00000475251 OR14A16Q8NHC5 309 aa11.67□□□□□ -0.54
SKA3-206ENST00000475251 C18orf12Q96KH6 178 aa11.67□□□□□ -0.54
SKA3-206ENST00000475251 SERPINB12Q96P63 405 aa11.67□□□□□ -0.54
SKA3-206ENST00000475251 ALKBH4Q9NXW9 302 aa11.67□□□□□ -0.54
SKA3-206ENST00000475251 MTRF1LQ9UGC7 380 aaKnown RBP11.67□□□□□ -0.54
SKA3-206ENST00000475251 LIPGQ9Y5X9 500 aa11.67□□□□□ -0.54
SKA3-206ENST00000475251 KCNE2Q9Y6J6 123 aa11.67□□□□□ -0.54
SKA3-206ENST00000475251 ZNF407Q9C0G0 2248 aa11.67□□□□□ -0.54
SKA3-206ENST00000475251 TRGV5A0A0B4J1U4 118 aa11.66□□□□□ -0.54
SKA3-206ENST00000475251 PRKNO60260 465 aaPredicted RBP11.66□□□□□ -0.54
SKA3-206ENST00000475251 GUCA1CO95843 209 aa11.66□□□□□ -0.54
SKA3-206ENST00000475251 IFNA16P05015 189 aa11.66□□□□□ -0.54
SKA3-206ENST00000475251 VPS41P49754 854 aa11.66□□□□□ -0.54
SKA3-206ENST00000475251 NR0B1P51843 470 aaKnown RBP11.66□□□□□ -0.54
SKA3-206ENST00000475251 HK2P52789 917 aa11.66□□□□□ -0.54
SKA3-206ENST00000475251 CCZ1BP86790 482 aa11.66□□□□□ -0.54
SKA3-206ENST00000475251 CCZ1P86791 482 aaPredicted RBP11.66□□□□□ -0.54
SKA3-206ENST00000475251 EFTUD2Q15029 972 aaKnown RBP eCLIP11.66□□□□□ -0.541e-8■■■■■ 36.9
SKA3-206ENST00000475251 DAZAP2Q15038 168 aaPredicted RBP11.66□□□□□ -0.54
SKA3-206ENST00000475251 TRIP13Q15645 432 aaPredicted RBP11.66□□□□□ -0.54
SKA3-206ENST00000475251 ZNF750Q32MQ0 723 aa11.66□□□□□ -0.54
SKA3-206ENST00000475251 NXPE4Q6UWF7 544 aa11.66□□□□□ -0.54
SKA3-206ENST00000475251 RNASE6Q93091 150 aaKnown RBP11.66□□□□□ -0.54
SKA3-206ENST00000475251 SCYL1Q96KG9 808 aa11.66□□□□□ -0.54
SKA3-206ENST00000475251 TSNARE1Q96NA8 513 aa11.66□□□□□ -0.54
SKA3-206ENST00000475251 SPNS1Q9H2V7 528 aa11.66□□□□□ -0.54
SKA3-206ENST00000475251 KLHL31Q9H511 634 aa11.66□□□□□ -0.54
SKA3-206ENST00000475251 LIN28AQ9H9Z2 209 aaKnown RBP11.66□□□□□ -0.54
SKA3-206ENST00000475251 DMRT3Q9NQL9 472 aa11.66□□□□□ -0.54
SKA3-206ENST00000475251 IARS2Q9NSE4 1012 aaKnown RBP11.66□□□□□ -0.54
SKA3-206ENST00000475251 GUCA1BQ9UMX6 200 aa11.66□□□□□ -0.54
SKA3-206ENST00000475251 DNAJC13O75165 2243 aa11.66□□□□□ -0.54
SKA3-206ENST00000475251 A0A0G2JMM0 328 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms