RNA–Protein interactions for RNA: ENST00000474945.1

SPCS1-204, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 2

Gene SPCS1, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-204ENST00000474945 H3F3CQ6NXT2 135 aa12.75□□□□□ -0.37
SPCS1-204ENST00000474945 GTF2H2CQ6P1K8 395 aa12.75□□□□□ -0.37
SPCS1-204ENST00000474945 ZNF793Q6ZN11 406 aa12.75□□□□□ -0.37
SPCS1-204ENST00000474945 GOLGA7Q7Z5G4 137 aa12.75□□□□□ -0.37
SPCS1-204ENST00000474945 IFT20Q8IY31 132 aa12.75□□□□□ -0.37
SPCS1-204ENST00000474945 ZNF595Q8IYB9 648 aa12.75□□□□□ -0.37
SPCS1-204ENST00000474945 LAS2Q8IYD9 372 aa12.75□□□□□ -0.37
SPCS1-204ENST00000474945 LGI4Q8N135 537 aa12.75□□□□□ -0.37
SPCS1-204ENST00000474945 PLD6Q8N2A8 252 aaKnown RBP12.75□□□□□ -0.37
SPCS1-204ENST00000474945 TMEM52Q8NDY8 209 aa12.75□□□□□ -0.37
SPCS1-204ENST00000474945 SRFBP1Q8NEF9 429 aaKnown RBP12.75□□□□□ -0.37
SPCS1-204ENST00000474945 OR7G3Q8NG95 312 aa12.75□□□□□ -0.37
SPCS1-204ENST00000474945 ELP5Q8TE02 316 aa12.75□□□□□ -0.37
SPCS1-204ENST00000474945 ZNF473Q8WTR7 871 aaKnown RBP12.75□□□□□ -0.37
SPCS1-204ENST00000474945 ISL2Q96A47 359 aa12.75□□□□□ -0.37
SPCS1-204ENST00000474945 GPR78Q96P69 363 aa12.75□□□□□ -0.37
SPCS1-204ENST00000474945 NPAS2Q99743 824 aa12.75□□□□□ -0.37
SPCS1-204ENST00000474945 CENPKQ9BS16 269 aa12.75□□□□□ -0.37
SPCS1-204ENST00000474945 TBCDQ9BTW9 1192 aa12.75□□□□□ -0.37
SPCS1-204ENST00000474945 CDCP1Q9H5V8 836 aa12.75□□□□□ -0.37
SPCS1-204ENST00000474945 ERRFI1Q9UJM3 462 aaPredicted RBP12.75□□□□□ -0.37
SPCS1-204ENST00000474945 DAPP1Q9UN19 280 aa12.75□□□□□ -0.37
SPCS1-204ENST00000474945 TNPO3Q9Y5L0 923 aaKnown RBP12.75□□□□□ -0.37
SPCS1-204ENST00000474945 USP9YO00507 2555 aaPredicted RBP12.74□□□□□ -0.37
SPCS1-204ENST00000474945 A1L4Q6 167 aa12.74□□□□□ -0.37
SPCS1-204ENST00000474945 TGFBR3LH3BV60 316 aa12.74□□□□□ -0.37
SPCS1-204ENST00000474945 SMIM24O75264 130 aa12.74□□□□□ -0.37
SPCS1-204ENST00000474945 SIX3O95343 332 aaPredicted RBP12.74□□□□□ -0.37
SPCS1-204ENST00000474945 TGFB1P01137 390 aa12.74□□□□□ -0.37
SPCS1-204ENST00000474945 CRYABP02511 175 aaKnown RBP12.74□□□□□ -0.37
SPCS1-204ENST00000474945 IFNA16P05015 189 aa12.74□□□□□ -0.37
SPCS1-204ENST00000474945 RHOXF2BP0C7M4 288 aa12.74□□□□□ -0.37
SPCS1-204ENST00000474945 CD46P15529 392 aa12.74□□□□□ -0.37
SPCS1-204ENST00000474945 HIST1H1TP22492 207 aaPredicted RBP12.74□□□□□ -0.37
SPCS1-204ENST00000474945 CNTFP26441 200 aa12.74□□□□□ -0.37
SPCS1-204ENST00000474945 TPP2P29144 1249 aaPredicted RBP12.74□□□□□ -0.37
SPCS1-204ENST00000474945 EEF1DP29692 281 aaKnown RBP12.74□□□□□ -0.37
SPCS1-204ENST00000474945 STX4Q12846 297 aa12.74□□□□□ -0.37
SPCS1-204ENST00000474945 E2F2Q14209 437 aa12.74□□□□□ -0.37
SPCS1-204ENST00000474945 TERF2Q15554 542 aa12.74□□□□□ -0.37
SPCS1-204ENST00000474945 AP5B1Q2VPB7 878 aa12.74□□□□□ -0.37
SPCS1-204ENST00000474945 KHDRBS2Q5VWX1 349 aaKnown RBP12.74□□□□□ -0.37
SPCS1-204ENST00000474945 CHSY3Q70JA7 882 aa12.74□□□□□ -0.37
SPCS1-204ENST00000474945 RPS19BP1Q86WX3 136 aaKnown RBP12.74□□□□□ -0.37
SPCS1-204ENST00000474945 RNF175Q8N4F7 328 aa12.74□□□□□ -0.37
SPCS1-204ENST00000474945 B3GNT7Q8NFL0 401 aa12.74□□□□□ -0.37
SPCS1-204ENST00000474945 HUS1BQ8NHY5 278 aa12.74□□□□□ -0.37
SPCS1-204ENST00000474945 DCAKDQ8WVC6 231 aa12.74□□□□□ -0.37
SPCS1-204ENST00000474945 NR4A3Q92570 626 aa12.74□□□□□ -0.37
SPCS1-204ENST00000474945 REPS1Q96D71 796 aa12.74□□□□□ -0.37
SPCS1-204ENST00000474945 CMTM7Q96FZ5 175 aa12.74□□□□□ -0.37
SPCS1-204ENST00000474945 SIGLEC12Q96PQ1 595 aa12.74□□□□□ -0.37
SPCS1-204ENST00000474945 PSMG3-AS1Q96PY0 264 aa12.74□□□□□ -0.37
SPCS1-204ENST00000474945 MTERF1Q99551 399 aaKnown RBP12.74□□□□□ -0.37
SPCS1-204ENST00000474945 RHOXF2Q9BQY4 288 aa12.74□□□□□ -0.37
SPCS1-204ENST00000474945 SORBS1Q9BX66 1292 aaKnown RBP12.74□□□□□ -0.37
SPCS1-204ENST00000474945 HES7Q9BYE0 225 aa12.74□□□□□ -0.37
SPCS1-204ENST00000474945 DEFB126Q9BYW3 111 aa12.74□□□□□ -0.37
SPCS1-204ENST00000474945 OR51B5Q9H339 312 aa12.74□□□□□ -0.37
SPCS1-204ENST00000474945 LYRM4Q9HD34 91 aa12.74□□□□□ -0.37
SPCS1-204ENST00000474945 ADAP2Q9NPF8 381 aa12.74□□□□□ -0.37
SPCS1-204ENST00000474945 DMRT3Q9NQL9 472 aa12.74□□□□□ -0.37
SPCS1-204ENST00000474945 ZNF358Q9NW07 568 aa12.74□□□□□ -0.37
SPCS1-204ENST00000474945 ZNF180Q9UJW8 692 aa12.74□□□□□ -0.37
SPCS1-204ENST00000474945 OSGIN2Q9Y236 505 aa12.74□□□□□ -0.37
SPCS1-204ENST00000474945 SLC5A6Q9Y289 635 aa12.74□□□□□ -0.37
SPCS1-204ENST00000474945 SCN2AQ99250 2005 aa12.73□□□□□ -0.37
SPCS1-204ENST00000474945 FCHO1O14526 889 aa12.73□□□□□ -0.37
SPCS1-204ENST00000474945 KLK8O60259 260 aa12.73□□□□□ -0.37
SPCS1-204ENST00000474945 ABHD2P08910 425 aa12.73□□□□□ -0.37
SPCS1-204ENST00000474945 RBP1P09455 135 aa12.73□□□□□ -0.37
SPCS1-204ENST00000474945 GP1BBP13224 206 aa12.73□□□□□ -0.37
SPCS1-204ENST00000474945 ATP5A1P25705 553 aaKnown RBP12.73□□□□□ -0.37
SPCS1-204ENST00000474945 CD96P40200 585 aa12.73□□□□□ -0.37
SPCS1-204ENST00000474945 CLCN2P51788 898 aa12.73□□□□□ -0.37
SPCS1-204ENST00000474945 KCNK10P57789 538 aa12.73□□□□□ -0.37
SPCS1-204ENST00000474945 RPS13P62277 151 aaKnown RBP12.73□□□□□ -0.37
SPCS1-204ENST00000474945 SRSF11Q05519 484 aaKnown RBP12.73□□□□□ -0.37
SPCS1-204ENST00000474945 PCBP2Q15366 365 aaKnown RBP eCLIP12.73□□□□□ -0.37
SPCS1-204ENST00000474945 CPSF6Q16630 551 aaKnown RBP eCLIP12.73□□□□□ -0.37
SPCS1-204ENST00000474945 SPINK14Q6IE38 97 aa12.73□□□□□ -0.37
SPCS1-204ENST00000474945 GFRALQ6UXV0 394 aa12.73□□□□□ -0.37
SPCS1-204ENST00000474945 UBE3DQ7Z6J8 389 aa12.73□□□□□ -0.37
SPCS1-204ENST00000474945 GSPT2Q8IYD1 628 aaKnown RBP12.73□□□□□ -0.37
SPCS1-204ENST00000474945 HORMAD2Q8N7B1 307 aa12.73□□□□□ -0.37
SPCS1-204ENST00000474945 ACOT4Q8N9L9 421 aa12.73□□□□□ -0.37
SPCS1-204ENST00000474945 TMEM178AQ8NBL3 297 aa12.73□□□□□ -0.37
SPCS1-204ENST00000474945 MDS2Q8NDY4 140 aa12.73□□□□□ -0.37
SPCS1-204ENST00000474945 NFAM1Q8NET5 270 aaPredicted RBP12.73□□□□□ -0.37
SPCS1-204ENST00000474945 THAP3Q8WTV1 239 aaPredicted RBP12.73□□□□□ -0.37
SPCS1-204ENST00000474945 NCLNQ969V3 563 aa12.73□□□□□ -0.37
SPCS1-204ENST00000474945 ATP6V1E2Q96A05 226 aa12.73□□□□□ -0.37
SPCS1-204ENST00000474945 PHF21BQ96EK2 531 aa12.73□□□□□ -0.37
SPCS1-204ENST00000474945 VMP1Q96GC9 406 aa12.73□□□□□ -0.37
SPCS1-204ENST00000474945 MAPKAP1Q9BPZ7 522 aa12.73□□□□□ -0.37
SPCS1-204ENST00000474945 IPPKQ9H8X2 491 aa12.73□□□□□ -0.37
SPCS1-204ENST00000474945 PRDM7Q9NQW5 492 aa12.73□□□□□ -0.37
SPCS1-204ENST00000474945 LRFN1Q9P244 771 aa12.73□□□□□ -0.37
SPCS1-204ENST00000474945 ADGRE2Q9UHX3 823 aa12.73□□□□□ -0.37
SPCS1-204ENST00000474945 FBXW2Q9UKT8 454 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms