RNA–Protein interactions for RNA: ENST00000474929.1

USP54-211, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 590 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-211ENST00000474929 YLPM1P49750 1951 aaKnown RBP7.32□□□□□ -1.24
USP54-211ENST00000474929 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.32□□□□□ -1.24
USP54-211ENST00000474929 A0A1W2PNV4 684 aa7.32□□□□□ -1.24
USP54-211ENST00000474929 LRRC3CA6NJW4 275 aa7.32□□□□□ -1.24
USP54-211ENST00000474929 H0Y3Z8 333 aa7.32□□□□□ -1.24
USP54-211ENST00000474929 LINC01387J3KSC0 135 aa7.32□□□□□ -1.24
USP54-211ENST00000474929 APOL1O14791 398 aa7.32□□□□□ -1.24
USP54-211ENST00000474929 HAT1O14929 419 aa7.32□□□□□ -1.24
USP54-211ENST00000474929 TNFSF13O75888 250 aa7.32□□□□□ -1.24
USP54-211ENST00000474929 C1orf105O95561 183 aa7.32□□□□□ -1.24
USP54-211ENST00000474929 ALDOAP04075 364 aaKnown RBP7.32□□□□□ -1.24
USP54-211ENST00000474929 HPNP05981 417 aa7.32□□□□□ -1.24
USP54-211ENST00000474929 SOD3P08294 240 aa7.32□□□□□ -1.24
USP54-211ENST00000474929 PTPN6P29350 595 aa7.32□□□□□ -1.24
USP54-211ENST00000474929 GRK3P35626 688 aa7.32□□□□□ -1.24
USP54-211ENST00000474929 CCR8P51685 355 aa7.32□□□□□ -1.24
USP54-211ENST00000474929 FOXL1Q12952 345 aa7.32□□□□□ -1.24
USP54-211ENST00000474929 MSLNQ13421 630 aaPredicted RBP7.32□□□□□ -1.24
USP54-211ENST00000474929 DEF8Q6ZN54 512 aa7.32□□□□□ -1.24
USP54-211ENST00000474929 ZNF550Q7Z398 422 aa7.32□□□□□ -1.24
USP54-211ENST00000474929 GRAMD2AQ8IUY3 354 aa7.32□□□□□ -1.24
USP54-211ENST00000474929 GCNT2Q8N0V5 402 aa7.32□□□□□ -1.24
USP54-211ENST00000474929 TMEM132CQ8N3T6 1108 aa7.32□□□□□ -1.24
USP54-211ENST00000474929 PQLC3Q8N755 202 aa7.32□□□□□ -1.24
USP54-211ENST00000474929 FBXO15Q8NCQ5 510 aaPredicted RBP7.32□□□□□ -1.24
USP54-211ENST00000474929 LRRN4Q8WUT4 740 aa7.32□□□□□ -1.24
USP54-211ENST00000474929 SKA2Q8WVK7 121 aaPredicted RBP7.32□□□□□ -1.24
USP54-211ENST00000474929 DAZLQ92904 295 aaKnown RBP7.32□□□□□ -1.24
USP54-211ENST00000474929 ABTB1Q969K4 478 aaPredicted RBP7.32□□□□□ -1.24
USP54-211ENST00000474929 PLPPR2Q96GM1 343 aa7.32□□□□□ -1.24
USP54-211ENST00000474929 WDYHV1Q96HA8 205 aa7.32□□□□□ -1.24
USP54-211ENST00000474929 ALS2CR12Q96Q35 445 aa7.32□□□□□ -1.24
USP54-211ENST00000474929 PANX3Q96QZ0 392 aa7.32□□□□□ -1.24
USP54-211ENST00000474929 TACO1Q9BSH4 297 aaKnown RBP7.32□□□□□ -1.24
USP54-211ENST00000474929 DOHHQ9BU89 302 aa7.32□□□□□ -1.24
USP54-211ENST00000474929 OR10A4Q9H209 315 aa7.32□□□□□ -1.24
USP54-211ENST00000474929 NGBQ9NPG2 151 aa7.32□□□□□ -1.24
USP54-211ENST00000474929 DNAJC11Q9NVH1 559 aa7.32□□□□□ -1.24
USP54-211ENST00000474929 IMPACTQ9P2X3 320 aa7.32□□□□□ -1.24
USP54-211ENST00000474929 TAC3Q9UHF0 121 aa7.32□□□□□ -1.24
USP54-211ENST00000474929 DMGDHQ9UI17 866 aaKnown RBP7.32□□□□□ -1.24
USP54-211ENST00000474929 ZNF223Q9UK11 482 aaPredicted RBP7.32□□□□□ -1.24
USP54-211ENST00000474929 IGKV1-8A0A0C4DH67 115 aa7.31□□□□□ -1.24
USP54-211ENST00000474929 SLC35F4A4IF30 521 aa7.31□□□□□ -1.24
USP54-211ENST00000474929 TMCO5BA8MYB1 307 aa7.31□□□□□ -1.24
USP54-211ENST00000474929 SMAPO00193 183 aa7.31□□□□□ -1.24
USP54-211ENST00000474929 NDUFS8O00217 210 aa7.31□□□□□ -1.24
USP54-211ENST00000474929 WWP2O00308 870 aa7.31□□□□□ -1.24
USP54-211ENST00000474929 KLF4O43474 513 aa7.31□□□□□ -1.24
USP54-211ENST00000474929 SHOX2O60902 331 aaPredicted RBP7.31□□□□□ -1.24
USP54-211ENST00000474929 TRAPPC6AO75865 159 aa7.31□□□□□ -1.24
USP54-211ENST00000474929 RFPL3SP0C7P2 107 aa7.31□□□□□ -1.24
USP54-211ENST00000474929 CD8BP10966 210 aa7.31□□□□□ -1.24
USP54-211ENST00000474929 RNH1P13489 461 aaKnown RBP7.31□□□□□ -1.24
USP54-211ENST00000474929 CPN1P15169 458 aa7.31□□□□□ -1.24
USP54-211ENST00000474929 PAMP19021 973 aa7.31□□□□□ -1.24
USP54-211ENST00000474929 TBXA2RP21731 343 aa7.31□□□□□ -1.24
USP54-211ENST00000474929 EEF1GP26641 437 aaKnown RBP7.31□□□□□ -1.24
USP54-211ENST00000474929 DPP4P27487 766 aa7.31□□□□□ -1.24
USP54-211ENST00000474929 CCR7P32248 378 aa7.31□□□□□ -1.24
USP54-211ENST00000474929 PIGAP37287 484 aa7.31□□□□□ -1.24
USP54-211ENST00000474929 BDKRB1P46663 353 aa7.31□□□□□ -1.24
USP54-211ENST00000474929 CDK9P50750 372 aaKnown RBP7.31□□□□□ -1.24
USP54-211ENST00000474929 HK2P52789 917 aa7.31□□□□□ -1.24
USP54-211ENST00000474929 CSE1LP55060 971 aaKnown RBP7.31□□□□□ -1.24
USP54-211ENST00000474929 MPEG1Q2M385 716 aa7.31□□□□□ -1.24
USP54-211ENST00000474929 ANKRD20A4Q4UJ75 823 aa7.31□□□□□ -1.24
USP54-211ENST00000474929 ANKRD20A2Q5SQ80 823 aa7.31□□□□□ -1.24
USP54-211ENST00000474929 ANKRD20A1Q5TYW2 823 aa7.31□□□□□ -1.24
USP54-211ENST00000474929 ANKRD20A3Q5VUR7 823 aa7.31□□□□□ -1.24
USP54-211ENST00000474929 UGT2A3Q6UWM9 527 aa7.31□□□□□ -1.24
USP54-211ENST00000474929 USP43Q70EL4 1123 aa7.31□□□□□ -1.24
USP54-211ENST00000474929 ADGRE4PQ86SQ3 457 aa7.31□□□□□ -1.24
USP54-211ENST00000474929 ASPGQ86U10 573 aa7.31□□□□□ -1.24
USP54-211ENST00000474929 DTX2Q86UW9 622 aa7.31□□□□□ -1.24
USP54-211ENST00000474929 PDSS2Q86YH6 399 aa7.31□□□□□ -1.24
USP54-211ENST00000474929 GPSM1Q86YR5 675 aa7.31□□□□□ -1.24
USP54-211ENST00000474929 SLC15A4Q8N697 577 aa7.31□□□□□ -1.24
USP54-211ENST00000474929 TEX29Q8N6K0 151 aa7.31□□□□□ -1.24
USP54-211ENST00000474929 PLD5Q8N7P1 536 aa7.31□□□□□ -1.24
USP54-211ENST00000474929 C7orf57Q8NEG2 295 aa7.31□□□□□ -1.24
USP54-211ENST00000474929 NEK11Q8NG66 645 aa7.31□□□□□ -1.24
USP54-211ENST00000474929 ANKRD9Q96BM1 317 aaPredicted RBP7.31□□□□□ -1.24
USP54-211ENST00000474929 OXNAD1Q96HP4 312 aaPredicted RBP7.31□□□□□ -1.24
USP54-211ENST00000474929 JSRP1Q96MG2 331 aaPredicted RBP7.31□□□□□ -1.24
USP54-211ENST00000474929 RNF157Q96PX1 679 aa7.31□□□□□ -1.24
USP54-211ENST00000474929 FERMT1Q9BQL6 677 aa7.31□□□□□ -1.24
USP54-211ENST00000474929 TRAF4Q9BUZ4 470 aaPredicted RBP7.31□□□□□ -1.24
USP54-211ENST00000474929 CARD6Q9BX69 1037 aa7.31□□□□□ -1.24
USP54-211ENST00000474929 MAK16Q9BXY0 300 aaKnown RBP7.31□□□□□ -1.24
USP54-211ENST00000474929 UGT2B28Q9BY64 529 aa7.31□□□□□ -1.24
USP54-211ENST00000474929 SEMA4BQ9NPR2 832 aaPredicted RBP7.31□□□□□ -1.24
USP54-211ENST00000474929 TMEM184CQ9NVA4 438 aa7.31□□□□□ -1.24
USP54-211ENST00000474929 CLCF1Q9UBD9 225 aa7.31□□□□□ -1.24
USP54-211ENST00000474929 FETUBQ9UGM5 382 aa7.31□□□□□ -1.24
USP54-211ENST00000474929 RSPH14Q9UHP6 348 aa7.31□□□□□ -1.24
USP54-211ENST00000474929 ANAPC7Q9UJX3 599 aa7.31□□□□□ -1.24
USP54-211ENST00000474929 TRHDEQ9UKU6 1024 aa7.31□□□□□ -1.24
USP54-211ENST00000474929 RNF112Q9ULX5 631 aa7.31□□□□□ -1.24
USP54-211ENST00000474929 AAR2Q9Y312 384 aaKnown RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms