RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 CCM2LQ9NUG4 571 aaPredicted RBP13□□□□□ -0.33
CCDC78-209ENST00000474647 DNAJB12Q9NXW2 375 aaKnown RBP13□□□□□ -0.33
CCDC78-209ENST00000474647 IKZF3Q9UKT9 509 aa13□□□□□ -0.33
CCDC78-209ENST00000474647 SLC22A14Q9Y267 594 aa13□□□□□ -0.33
CCDC78-209ENST00000474647 MRPS33Q9Y291 106 aaKnown RBP13□□□□□ -0.33
CCDC78-209ENST00000474647 ANKHD1Q8IWZ3 2542 aaKnown RBP12.99□□□□□ -0.33
CCDC78-209ENST00000474647 MYOCOSA0A1B0GUC4 107 aa12.99□□□□□ -0.33
CCDC78-209ENST00000474647 CLDN4O14493 209 aa12.99□□□□□ -0.33
CCDC78-209ENST00000474647 IFNA16P05015 189 aa12.99□□□□□ -0.33
CCDC78-209ENST00000474647 TCP1P17987 556 aaKnown RBP12.99□□□□□ -0.33
CCDC78-209ENST00000474647 MAGEA5P43359 124 aa12.99□□□□□ -0.33
CCDC78-209ENST00000474647 ZFP36L2P47974 494 aaKnown RBP12.99□□□□□ -0.33
CCDC78-209ENST00000474647 HSD17B7P56937 341 aa12.99□□□□□ -0.33
CCDC78-209ENST00000474647 RAB38P57729 211 aa12.99□□□□□ -0.33
CCDC78-209ENST00000474647 PPP2R2AP63151 447 aa12.99□□□□□ -0.33
CCDC78-209ENST00000474647 FOLH1Q04609 750 aa12.99□□□□□ -0.33
CCDC78-209ENST00000474647 SNTB1Q13884 538 aaKnown RBP12.99□□□□□ -0.33
CCDC78-209ENST00000474647 RUNX2Q13950 521 aa12.99□□□□□ -0.33
CCDC78-209ENST00000474647 ZNF750Q32MQ0 723 aa12.99□□□□□ -0.33
CCDC78-209ENST00000474647 XKR6Q5GH73 641 aa12.99□□□□□ -0.33
CCDC78-209ENST00000474647 SPANXN3Q5MJ09 141 aa12.99□□□□□ -0.33
CCDC78-209ENST00000474647 FAM45BPQ6NSW5 357 aa12.99□□□□□ -0.33
CCDC78-209ENST00000474647 B3GNT6Q6ZMB0 384 aa12.99□□□□□ -0.33
CCDC78-209ENST00000474647 GK5Q6ZS86 529 aa12.99□□□□□ -0.33
CCDC78-209ENST00000474647 GPALPP1Q8IXQ4 340 aa12.99□□□□□ -0.33
CCDC78-209ENST00000474647 ZZZ3Q8IYH5 903 aa12.99□□□□□ -0.33
CCDC78-209ENST00000474647 CHDHQ8NE62 594 aaPredicted RBP12.99□□□□□ -0.33
CCDC78-209ENST00000474647 FAM45AQ8TCE6 357 aa12.99□□□□□ -0.33
CCDC78-209ENST00000474647 CERS2Q96G23 380 aa12.99□□□□□ -0.33
CCDC78-209ENST00000474647 PBKQ96KB5 322 aa12.99□□□□□ -0.33
CCDC78-209ENST00000474647 PWWP2AQ96N64 755 aa12.99□□□□□ -0.33
CCDC78-209ENST00000474647 DOCK7Q96N67 2140 aa12.99□□□□□ -0.33
CCDC78-209ENST00000474647 RASL10BQ96S79 203 aa12.99□□□□□ -0.33
CCDC78-209ENST00000474647 TTYH2Q9BSA4 534 aa12.99□□□□□ -0.33
CCDC78-209ENST00000474647 POLDIP3Q9BY77 421 aaKnown RBP12.99□□□□□ -0.33
CCDC78-209ENST00000474647 LDAHQ9H6V9 325 aa12.99□□□□□ -0.33
CCDC78-209ENST00000474647 ZDHHC11Q9H8X9 412 aa12.99□□□□□ -0.33
CCDC78-209ENST00000474647 MYOTQ9UBF9 498 aa12.99□□□□□ -0.33
CCDC78-209ENST00000474647 KCNE2Q9Y6J6 123 aa12.99□□□□□ -0.33
CCDC78-209ENST00000474647 CLCA3PQ9Y6N3 262 aa12.99□□□□□ -0.33
CCDC78-209ENST00000474647 KIAA1549Q9HCM3 1950 aa12.99□□□□□ -0.33
CCDC78-209ENST00000474647 A0A0G2JNJ9 132 aa12.98□□□□□ -0.33
CCDC78-209ENST00000474647 NPEPPSL1A6NEC2 478 aa12.98□□□□□ -0.33
CCDC78-209ENST00000474647 BCKDKO14874 412 aa12.98□□□□□ -0.33
CCDC78-209ENST00000474647 B3GALT2O43825 422 aa12.98□□□□□ -0.33
CCDC78-209ENST00000474647 WDR47O94967 919 aa12.98□□□□□ -0.33
CCDC78-209ENST00000474647 TTC4O95801 387 aa12.98□□□□□ -0.33
CCDC78-209ENST00000474647 HNRNPH1P31943 449 aaKnown RBP12.98□□□□□ -0.33
CCDC78-209ENST00000474647 GPR143P51810 404 aa12.98□□□□□ -0.33
CCDC78-209ENST00000474647 PPP1R7Q15435 360 aa12.98□□□□□ -0.33
CCDC78-209ENST00000474647 CEBPEQ15744 281 aa12.98□□□□□ -0.33
CCDC78-209ENST00000474647 NDUFAF5Q5TEU4 345 aa12.98□□□□□ -0.33
CCDC78-209ENST00000474647 HSDL2Q6YN16 418 aa12.98□□□□□ -0.33
CCDC78-209ENST00000474647 RGS9BPQ6ZS82 235 aa12.98□□□□□ -0.33
CCDC78-209ENST00000474647 FAM47EQ6ZV65 393 aa12.98□□□□□ -0.33
CCDC78-209ENST00000474647 WDR53Q7Z5U6 358 aaPredicted RBP12.98□□□□□ -0.33
CCDC78-209ENST00000474647 CNTN4Q8IWV2 1026 aa12.98□□□□□ -0.33
CCDC78-209ENST00000474647 RASGEF1CQ8N431 466 aa12.98□□□□□ -0.33
CCDC78-209ENST00000474647 MYRIPQ8NFW9 859 aa12.98□□□□□ -0.33
CCDC78-209ENST00000474647 CFAP36Q96G28 342 aa12.98□□□□□ -0.33
CCDC78-209ENST00000474647 CSF3RQ99062 836 aa12.98□□□□□ -0.33
CCDC78-209ENST00000474647 FAM173AQ9BQD7 235 aa12.98□□□□□ -0.33
CCDC78-209ENST00000474647 TMUB1Q9BVT8 246 aa12.98□□□□□ -0.33
CCDC78-209ENST00000474647 EXO5Q9H790 373 aa12.98□□□□□ -0.33
CCDC78-209ENST00000474647 COPS7BQ9H9Q2 264 aaPredicted RBP12.98□□□□□ -0.33
CCDC78-209ENST00000474647 ALKBH4Q9NXW9 302 aa12.98□□□□□ -0.33
CCDC78-209ENST00000474647 Q9UFV3 132 aa12.98□□□□□ -0.33
CCDC78-209ENST00000474647 ACAD8Q9UKU7 415 aa12.98□□□□□ -0.33
CCDC78-209ENST00000474647 PPIEQ9UNP9 301 aaKnown RBP12.98□□□□□ -0.33
CCDC78-209ENST00000474647 FAM215AQ9Y5M1 114 aa12.98□□□□□ -0.33
CCDC78-209ENST00000474647 SAR1BQ9Y6B6 198 aa12.98□□□□□ -0.33
CCDC78-209ENST00000474647 A0A088AWK7 358 aa12.97□□□□□ -0.33
CCDC78-209ENST00000474647 ATP6AP2A0A1C7CYW4 349 aa12.97□□□□□ -0.33
CCDC78-209ENST00000474647 OR14I1A6ND48 311 aa12.97□□□□□ -0.33
CCDC78-209ENST00000474647 TMEM200CA6NKL6 621 aa12.97□□□□□ -0.33
CCDC78-209ENST00000474647 CDC7O00311 574 aa12.97□□□□□ -0.33
CCDC78-209ENST00000474647 H2AFYO75367 372 aaKnown RBP12.97□□□□□ -0.33
CCDC78-209ENST00000474647 ATP6AP2O75787 350 aa12.97□□□□□ -0.33
CCDC78-209ENST00000474647 CELA3AP09093 270 aa12.97□□□□□ -0.33
CCDC78-209ENST00000474647 GLI4P10075 376 aa12.97□□□□□ -0.33
CCDC78-209ENST00000474647 KLK2P20151 261 aa12.97□□□□□ -0.33
CCDC78-209ENST00000474647 ZNF10P21506 573 aaPredicted RBP12.97□□□□□ -0.33
CCDC78-209ENST00000474647 CERS1P27544 350 aa12.97□□□□□ -0.33
CCDC78-209ENST00000474647 DNASE1L1P49184 302 aa12.97□□□□□ -0.33
CCDC78-209ENST00000474647 MAN2A2P49641 1150 aa12.97□□□□□ -0.33
CCDC78-209ENST00000474647 HK2P52789 917 aa12.97□□□□□ -0.33
CCDC78-209ENST00000474647 PLA2G16P53816 162 aa12.97□□□□□ -0.33
CCDC78-209ENST00000474647 SLBPQ14493 270 aaKnown RBP eCLIP12.97□□□□□ -0.33
CCDC78-209ENST00000474647 ELAVL1Q15717 326 aaKnown RBP12.97□□□□□ -0.33
CCDC78-209ENST00000474647 PPP1R3AQ16821 1122 aa12.97□□□□□ -0.33
CCDC78-209ENST00000474647 BBS9Q3SYG4 887 aa12.97□□□□□ -0.33
CCDC78-209ENST00000474647 RNASEH2BQ5TBB1 312 aaKnown RBP12.97□□□□□ -0.33
CCDC78-209ENST00000474647 TRIM40Q6P9F5 258 aa12.97□□□□□ -0.33
CCDC78-209ENST00000474647 TMIGD1Q6UXZ0 262 aa12.97□□□□□ -0.33
CCDC78-209ENST00000474647 RTL4Q6ZR62 310 aa12.97□□□□□ -0.33
CCDC78-209ENST00000474647 FRA10AC1Q70Z53 315 aa12.97□□□□□ -0.33
CCDC78-209ENST00000474647 TGIF2LYQ8IUE0 185 aa12.97□□□□□ -0.33
CCDC78-209ENST00000474647 KLHDC8AQ8IYD2 350 aa12.97□□□□□ -0.33
CCDC78-209ENST00000474647 TMEM132CQ8N3T6 1108 aa12.97□□□□□ -0.33
CCDC78-209ENST00000474647 FAM109AQ8N4B1 249 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 227.8 ms