RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 XKR8Q9H6D3 395 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 VCX3AQ9NNX9 186 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 MRPS30Q9NP92 439 aaKnown RBP9.34□□□□□ -0.91
USP39-214ENST00000474572 A4GALTQ9NPC4 353 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 PRDM8Q9NQV8 689 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 PAPOLBQ9NRJ5 636 aaKnown RBP9.34□□□□□ -0.91
USP39-214ENST00000474572 TEX10Q9NXF1 929 aaPredicted RBP9.34□□□□□ -0.91
USP39-214ENST00000474572 RAPGEFL1Q9UHV5 662 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 ACSL6Q9UKU0 697 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 MMP17Q9ULZ9 603 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 PCDHGA8Q9Y5G5 932 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 NUP214P35658 2090 aaPredicted RBP9.34□□□□□ -0.91
USP39-214ENST00000474572 PRAMEF25A6NGN4 478 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 TRIM64BA6NI03 449 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 PDZK1P1A8MUH7 402 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 C4orf51C9J302 202 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 hCG_2039718K7EN88 272 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 HAT1O14929 419 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 B4GALT2O60909 372 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 UGT2B11O75310 529 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 DNAJB5O75953 348 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 SEC24DO94855 1032 aaPredicted RBP9.33□□□□□ -0.92
USP39-214ENST00000474572 FKBP9O95302 570 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 RECKO95980 971 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 CCDC159P0C7I6 412 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 PRKACGP22612 351 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 CRHBPP24387 322 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 IGFBP5P24593 272 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 ELK4P28324 431 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 CMPK1P30085 196 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 PEX19P40855 299 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 ARHGDIAP52565 204 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 DSTNP60981 165 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 CD47Q08722 323 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 CCINQ13939 588 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 PLCL1Q15111 1095 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 SKIV2LQ15477 1246 aaKnown RBP9.33□□□□□ -0.92
USP39-214ENST00000474572 CTU2Q2VPK5 515 aaKnown RBP9.33□□□□□ -0.92
USP39-214ENST00000474572 IFI44LQ53G44 452 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 C6orf141Q5SZD1 244 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 TPRG1LQ5T0D9 272 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 CWF19L1Q69YN2 538 aaKnown RBP9.33□□□□□ -0.92
USP39-214ENST00000474572 ABHD17CQ6PCB6 329 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 SLC30A9Q6PML9 568 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 B3GNT6Q6ZMB0 384 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 ZNF793Q6ZN11 406 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 ZNF605Q86T29 641 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 FAM124AQ86V42 546 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 PAQR7Q86WK9 346 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 RNF130Q86XS8 419 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 ARMC8Q8IUR7 673 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 TDHQ8IZJ6 230 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 AMER3Q8N944 861 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 MFSD9Q8NBP5 474 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 OR4C15Q8NGM1 316 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 NFKBIDQ8NI38 313 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 FLVCR1-AS1Q8TAF5 88 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 APOBEC4Q8WW27 367 aaKnown RBP9.33□□□□□ -0.92
USP39-214ENST00000474572 TMIGD2Q96BF3 282 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 MS4A6EQ96DS6 147 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 ZNF347Q96SE7 839 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 DOK1Q99704 481 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 GABARAPL3Q9BY60 117 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 NLNQ9BYT8 704 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 REEP1Q9H902 201 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 PRM3Q9NNZ6 103 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 CD93Q9NPY3 652 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 PRDM7Q9NQW5 492 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 ZSCAN32Q9NX65 697 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 THUMPD1Q9NXG2 353 aaKnown RBP9.33□□□□□ -0.92
USP39-214ENST00000474572 SPHK1Q9NYA1 384 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 OR6C2Q9NZP2 312 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 USP36Q9P275 1121 aaKnown RBP9.33□□□□□ -0.92
USP39-214ENST00000474572 TBC1D29Q9UFV1 150 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 RSL24D1Q9UHA3 163 aaKnown RBP9.33□□□□□ -0.92
USP39-214ENST00000474572 BAG5Q9UL15 447 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 ANGPT4Q9Y264 503 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 PCDHGA4Q9Y5G9 962 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 MTCH2Q9Y6C9 303 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 COLEC10Q9Y6Z7 277 aa9.33□□□□□ -0.92
USP39-214ENST00000474572 FANCMQ8IYD8 2048 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 SNRNP200O75643 2136 aaKnown RBP9.32□□□□□ -0.92
USP39-214ENST00000474572 ATG2BQ96BY7 2078 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 PRAMEF33A0A0G2JMD5 474 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 LRRC72A6NJI9 287 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 C2CD4DB7Z1M9 353 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 H3BSA7 217 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 M0QX08 132 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 SLC1A7O00341 560 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 BCKDKO14874 412 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 ADAMDEC1O15204 470 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 ABCB7O75027 752 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 EML2O95834 649 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 IFNA14P01570 189 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 CHRM5P08912 532 aaPredicted RBP9.32□□□□□ -0.92
USP39-214ENST00000474572 ACADMP11310 421 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 ETS2P15036 469 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 GABRG2P18507 467 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 SLC5A2P31639 672 aa9.32□□□□□ -0.92
USP39-214ENST00000474572 ACSL1P33121 698 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms