RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 APOBEC4Q8WW27 367 aaKnown RBP3.77□□□□□ -1.81
BRCA1-212ENST00000473961 OMA1Q96E52 524 aa3.77□□□□□ -1.81
BRCA1-212ENST00000473961 ZNF274Q96GC6 653 aaPredicted RBP3.77□□□□□ -1.81
BRCA1-212ENST00000473961 RPGRIP1Q96KN7 1286 aa3.77□□□□□ -1.81
BRCA1-212ENST00000473961 UHRF2Q96PU4 802 aa3.77□□□□□ -1.81
BRCA1-212ENST00000473961 CTAGE1Q96RT6 745 aa3.77□□□□□ -1.81
BRCA1-212ENST00000473961 SSX3Q99909 188 aa3.77□□□□□ -1.81
BRCA1-212ENST00000473961 ZNF577Q9BSK1 485 aa3.77□□□□□ -1.81
BRCA1-212ENST00000473961 NTMT1Q9BV86 223 aa3.77□□□□□ -1.81
BRCA1-212ENST00000473961 NMNAT2Q9BZQ4 307 aa3.77□□□□□ -1.81
BRCA1-212ENST00000473961 TMEM231Q9H6L2 316 aa3.77□□□□□ -1.81
BRCA1-212ENST00000473961 EGLN3Q9H6Z9 239 aa3.77□□□□□ -1.81
BRCA1-212ENST00000473961 VPS54Q9P1Q0 977 aa3.77□□□□□ -1.81
BRCA1-212ENST00000473961 ZNF624Q9P2J8 865 aaPredicted RBP3.77□□□□□ -1.81
BRCA1-212ENST00000473961 ERVK-18Q9QC07 812 aa3.77□□□□□ -1.81
BRCA1-212ENST00000473961 COPS7AQ9UBW8 275 aa3.77□□□□□ -1.81
BRCA1-212ENST00000473961 C2CD2Q9Y426 696 aa3.77□□□□□ -1.81
BRCA1-212ENST00000473961 ATP6V0A2Q9Y487 856 aa3.77□□□□□ -1.81
BRCA1-212ENST00000473961 SMCHD1A6NHR9 2005 aa3.77□□□□□ -1.81
BRCA1-212ENST00000473961 TONSLQ96HA7 1378 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 STK36Q9NRP7 1315 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 A0A1B0GUV1 79 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 SLC22A2O15244 555 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 SAP30O75446 220 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 EPOP01588 193 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 GPIP06744 558 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 HMBSP08397 361 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 HIST1H2AGP0C0S8 130 aaPredicted RBP3.76□□□□□ -1.81
BRCA1-212ENST00000473961 ODC1P11926 461 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 EZRP15311 586 aaKnown RBP3.76□□□□□ -1.81
BRCA1-212ENST00000473961 FCARP24071 287 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 DNAJB1P25685 340 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 GIFP27352 417 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 PKLRP30613 574 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 TNFRSF4P43489 277 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 OR3A2P47893 321 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 PITPNBP48739 271 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 TKTL1P51854 596 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 OR1D5P58170 312 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 GUCY2DQ02846 1103 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 ILF3Q12906 894 aaKnown RBP eCLIP3.76□□□□□ -1.81
BRCA1-212ENST00000473961 SNX1Q13596 522 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 HEPACAMQ14CZ8 416 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 ZRSR1Q15695 479 aaKnown RBP3.76□□□□□ -1.81
BRCA1-212ENST00000473961 EXT1Q16394 746 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 DUSP5Q16690 384 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 LRRC37A5PQ49AS3 106 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 FAM106AQ4KMX7 169 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 C9orf50Q5SZB4 431 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 IL23RQ5VWK5 629 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 PLPP4Q5VZY2 271 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 OR4C11Q6IEV9 310 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 AFTPHQ6ULP2 937 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 CWC27Q6UX04 472 aaKnown RBP3.76□□□□□ -1.81
BRCA1-212ENST00000473961 UNC5DQ6UXZ4 953 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 CENPQQ7L2Z9 268 aaPredicted RBP3.76□□□□□ -1.81
BRCA1-212ENST00000473961 CHMP1BQ7LBR1 199 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 C17orf64Q86WR6 236 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.76□□□□□ -1.81
BRCA1-212ENST00000473961 SLC43A2Q8N370 569 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 ZBTB44Q8NCP5 570 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 CCDC197Q8NCU1 140 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 OR56B1Q8NGI3 324 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 OR10V1Q8NGI7 309 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 OR4C3Q8NH37 302 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 LMO3Q8TAP4 145 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 GOLGA5Q8TBA6 731 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 MAPK15Q8TD08 544 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 HIST1H2ACQ93077 130 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 ALG14Q96F25 216 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 SENP5Q96HI0 755 aaPredicted RBP3.76□□□□□ -1.81
BRCA1-212ENST00000473961 C10orf90Q96M02 699 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 COQ7Q99807 217 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 WACQ9BTA9 647 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 NUSAP1Q9BXS6 441 aaKnown RBP3.76□□□□□ -1.81
BRCA1-212ENST00000473961 YY1AP1Q9H869 796 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 C3orf14Q9HBI5 128 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 UBE2TQ9NPD8 197 aaPredicted RBP3.76□□□□□ -1.81
BRCA1-212ENST00000473961 NDUFA13Q9P0J0 144 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.76□□□□□ -1.81
BRCA1-212ENST00000473961 ANKMY1Q9P2S6 941 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 EPHA6Q9UF33 1036 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 PSORS1C1Q9UIG5 152 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 MRTO4Q9UKD2 239 aaKnown RBP3.76□□□□□ -1.81
BRCA1-212ENST00000473961 BLOC1S6Q9UL45 172 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 U3KQV3 271 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 CACNA1IQ9P0X4 2223 aa3.76□□□□□ -1.81
BRCA1-212ENST00000473961 KTN1Q86UP2 1357 aaKnown RBP3.76□□□□□ -1.81
BRCA1-212ENST00000473961 ERICH3Q5RHP9 1530 aa3.75□□□□□ -1.81
BRCA1-212ENST00000473961 IGKV2D-30A0A075B6S6 120 aa3.75□□□□□ -1.81
BRCA1-212ENST00000473961 A0A087WZ39 114 aa3.75□□□□□ -1.81
BRCA1-212ENST00000473961 UQCRHLA0A096LP55 91 aa3.75□□□□□ -1.81
BRCA1-212ENST00000473961 hCG_38984A0A1B0GV85 526 aa3.75□□□□□ -1.81
BRCA1-212ENST00000473961 ATP6AP2A0A1C7CYW4 349 aa3.75□□□□□ -1.81
BRCA1-212ENST00000473961 BLOC1S5-TXNDC5H3BN57 136 aa3.75□□□□□ -1.81
BRCA1-212ENST00000473961 SURF4O15260 269 aa3.75□□□□□ -1.81
BRCA1-212ENST00000473961 TRMUO75648 421 aaKnown RBP3.75□□□□□ -1.81
BRCA1-212ENST00000473961 AKR7A3O95154 331 aa3.75□□□□□ -1.81
BRCA1-212ENST00000473961 CPNE6O95741 557 aa3.75□□□□□ -1.81
BRCA1-212ENST00000473961 FGF19O95750 216 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms