RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 MARCH7Q9H992 704 aa20.18■□□□□ 0.82
COL18A1-207ENST00000473212 C1GALT1Q9NS00 363 aa20.18■□□□□ 0.82
COL18A1-207ENST00000473212 HCFC2Q9Y5Z7 792 aa20.18■□□□□ 0.82
COL18A1-207ENST00000473212 CCL16O15467 120 aa20.17■□□□□ 0.82
COL18A1-207ENST00000473212 CXCL10P02778 98 aa20.17■□□□□ 0.82
COL18A1-207ENST00000473212 CHMP24386 653 aa20.17■□□□□ 0.82
COL18A1-207ENST00000473212 CNR2P34972 360 aa20.17■□□□□ 0.82
COL18A1-207ENST00000473212 SLC15A1P46059 708 aa20.17■□□□□ 0.82
COL18A1-207ENST00000473212 SLC5A12Q1EHB4 618 aa20.17■□□□□ 0.82
COL18A1-207ENST00000473212 BCL7AQ4VC05 210 aa20.17■□□□□ 0.82
COL18A1-207ENST00000473212 C19orf48Q6RUI8 117 aa20.17■□□□□ 0.82
COL18A1-207ENST00000473212 KLHL17Q6TDP4 642 aa20.17■□□□□ 0.82
COL18A1-207ENST00000473212 SLCO4C1Q6ZQN7 724 aa20.17■□□□□ 0.82
COL18A1-207ENST00000473212 COMMD6Q7Z4G1 85 aa20.17■□□□□ 0.82
COL18A1-207ENST00000473212 ADIPOR2Q86V24 386 aa20.17■□□□□ 0.82
COL18A1-207ENST00000473212 OR8H2Q8N162 312 aa20.17■□□□□ 0.82
COL18A1-207ENST00000473212 CHAC2Q8WUX2 184 aa20.17■□□□□ 0.82
COL18A1-207ENST00000473212 GEMIN6Q8WXD5 167 aaKnown RBP20.17■□□□□ 0.82
COL18A1-207ENST00000473212 CNPPD1Q9BV87 410 aa20.17■□□□□ 0.82
COL18A1-207ENST00000473212 EMILIN2Q9BXX0 1053 aa20.17■□□□□ 0.82
COL18A1-207ENST00000473212 EXOSC4Q9NPD3 245 aaKnown RBP20.17■□□□□ 0.82
COL18A1-207ENST00000473212 ATP6V1HQ9UI12 483 aa20.17■□□□□ 0.82
COL18A1-207ENST00000473212 MAPRE3Q9UPY8 281 aa20.17■□□□□ 0.82
COL18A1-207ENST00000473212 TRAV19A0A0A6YYK7 116 aa20.17■□□□□ 0.82
COL18A1-207ENST00000473212 ALDH1A1P00352 501 aa20.17■□□□□ 0.82
COL18A1-207ENST00000473212 TIMP2P16035 220 aa20.17■□□□□ 0.82
COL18A1-207ENST00000473212 ZNF24P17028 368 aa20.17■□□□□ 0.82
COL18A1-207ENST00000473212 CBLP22681 906 aa20.17■□□□□ 0.82
COL18A1-207ENST00000473212 LIMS1P48059 325 aa20.17■□□□□ 0.82
COL18A1-207ENST00000473212 OR2B6P58173 313 aa20.17■□□□□ 0.82
COL18A1-207ENST00000473212 TBPL1P62380 186 aa20.17■□□□□ 0.82
COL18A1-207ENST00000473212 FCHO2Q0JRZ9 810 aa20.17■□□□□ 0.82
COL18A1-207ENST00000473212 STARD3Q14849 445 aa20.17■□□□□ 0.82
COL18A1-207ENST00000473212 TIMM50Q3ZCQ8 353 aa20.17■□□□□ 0.82
COL18A1-207ENST00000473212 TMEM220Q6QAJ8 160 aa20.17■□□□□ 0.82
COL18A1-207ENST00000473212 GOT1L1Q8NHS2 421 aaPredicted RBP20.17■□□□□ 0.82
COL18A1-207ENST00000473212 VPS35Q96QK1 796 aa20.17■□□□□ 0.82
COL18A1-207ENST00000473212 CLN6Q9NWW5 311 aa20.17■□□□□ 0.82
COL18A1-207ENST00000473212 RAB23Q9ULC3 237 aa20.17■□□□□ 0.82
COL18A1-207ENST00000473212 PDZK1P1A8MUH7 402 aa20.16■□□□□ 0.82
COL18A1-207ENST00000473212 A8MVJ9 347 aa20.16■□□□□ 0.82
COL18A1-207ENST00000473212 H3BQ06 376 aaPredicted RBP20.16■□□□□ 0.82
COL18A1-207ENST00000473212 GRM6O15303 877 aa20.16■□□□□ 0.82
COL18A1-207ENST00000473212 CYP7B1O75881 506 aa20.16■□□□□ 0.82
COL18A1-207ENST00000473212 KRT8P05787 483 aa20.16■□□□□ 0.82
COL18A1-207ENST00000473212 TNFSF8P32971 234 aa20.16■□□□□ 0.82
COL18A1-207ENST00000473212 CHI3L1P36222 383 aaPredicted RBP20.16■□□□□ 0.82
COL18A1-207ENST00000473212 RPS26P62854 115 aaKnown RBP20.16■□□□□ 0.82
COL18A1-207ENST00000473212 EEF1A2Q05639 463 aaKnown RBP20.16■□□□□ 0.82
COL18A1-207ENST00000473212 RBBP4Q09028 425 aa20.16■□□□□ 0.82
COL18A1-207ENST00000473212 ZNF763Q0D2J5 394 aa20.16■□□□□ 0.82
COL18A1-207ENST00000473212 PLAG1Q6DJT9 500 aa20.16■□□□□ 0.82
COL18A1-207ENST00000473212 IL4I1Q96RQ9 567 aa20.16■□□□□ 0.82
COL18A1-207ENST00000473212 WRAP53Q9BUR4 548 aaKnown RBP20.16■□□□□ 0.82
COL18A1-207ENST00000473212 RSPO3Q9BXY4 272 aaPredicted RBP20.16■□□□□ 0.82
COL18A1-207ENST00000473212 TPK1Q9H3S4 243 aa20.16■□□□□ 0.82
COL18A1-207ENST00000473212 FTSJ1Q9UET6 329 aa20.16■□□□□ 0.82
COL18A1-207ENST00000473212 TBC1D24Q9ULP9 559 aa20.16■□□□□ 0.82
COL18A1-207ENST00000473212 ZAR1LA6NP61 321 aa20.16■□□□□ 0.82
COL18A1-207ENST00000473212 H3BM21 787 aa20.16■□□□□ 0.82
COL18A1-207ENST00000473212 VIPR1P32241 457 aa20.16■□□□□ 0.82
COL18A1-207ENST00000473212 GJA8P48165 433 aa20.16■□□□□ 0.82
COL18A1-207ENST00000473212 SLBPQ14493 270 aaKnown RBP eCLIP20.16■□□□□ 0.82
COL18A1-207ENST00000473212 LRRC26Q2I0M4 334 aa20.16■□□□□ 0.82
COL18A1-207ENST00000473212 TOR1AIP1Q5JTV8 583 aa20.16■□□□□ 0.82
COL18A1-207ENST00000473212 OR56A3Q8NH54 315 aa20.16■□□□□ 0.82
COL18A1-207ENST00000473212 TRNT1Q96Q11 434 aaKnown RBP20.16■□□□□ 0.82
COL18A1-207ENST00000473212 MAPKAP1Q9BPZ7 522 aa20.16■□□□□ 0.82
COL18A1-207ENST00000473212 CNOT2Q9NZN8 540 aaKnown RBP20.16■□□□□ 0.82
COL18A1-207ENST00000473212 TRBC2A0A5B9 178 aa20.15■□□□□ 0.82
COL18A1-207ENST00000473212 SH3D21A4FU49 640 aa20.15■□□□□ 0.82
COL18A1-207ENST00000473212 A6NL46 340 aa20.15■□□□□ 0.82
COL18A1-207ENST00000473212 K7ESM1 405 aa20.15■□□□□ 0.82
COL18A1-207ENST00000473212 RGS5O15539 181 aa20.15■□□□□ 0.82
COL18A1-207ENST00000473212 RECKO95980 971 aa20.15■□□□□ 0.82
COL18A1-207ENST00000473212 IGFBP1P08833 259 aaPredicted RBP20.15■□□□□ 0.82
COL18A1-207ENST00000473212 PTPN2P17706 415 aa20.15■□□□□ 0.82
COL18A1-207ENST00000473212 CRISP1P54107 249 aa20.15■□□□□ 0.82
COL18A1-207ENST00000473212 NDUFA5Q16718 116 aa20.15■□□□□ 0.82
COL18A1-207ENST00000473212 LEXMQ3ZCV2 418 aa20.15■□□□□ 0.82
COL18A1-207ENST00000473212 MED27Q6P2C8 311 aa20.15■□□□□ 0.82
COL18A1-207ENST00000473212 CCDC80Q76M96 950 aa20.15■□□□□ 0.82
COL18A1-207ENST00000473212 MMAAQ8IVH4 418 aaKnown RBP20.15■□□□□ 0.82
COL18A1-207ENST00000473212 OXR1Q8N573 874 aa20.15■□□□□ 0.82
COL18A1-207ENST00000473212 OPALINQ96PE5 141 aa20.15■□□□□ 0.82
COL18A1-207ENST00000473212 TMEM38AQ9H6F2 299 aa20.15■□□□□ 0.82
COL18A1-207ENST00000473212 NMNAT1Q9HAN9 279 aaPredicted RBP20.15■□□□□ 0.82
COL18A1-207ENST00000473212 C11orf16Q9NQ32 467 aa20.15■□□□□ 0.82
COL18A1-207ENST00000473212 WBP11Q9Y2W2 641 aaKnown RBP20.15■□□□□ 0.82
COL18A1-207ENST00000473212 SLC5A10A0PJK1 596 aa20.15■□□□□ 0.82
COL18A1-207ENST00000473212 CATP04040 527 aaKnown RBP20.15■□□□□ 0.82
COL18A1-207ENST00000473212 CKMT1AP12532 417 aa20.15■□□□□ 0.82
COL18A1-207ENST00000473212 SOAT1P35610 550 aa20.15■□□□□ 0.82
COL18A1-207ENST00000473212 SOX3P41225 446 aa20.15■□□□□ 0.82
COL18A1-207ENST00000473212 C2orf80Q0P641 193 aa20.15■□□□□ 0.82
COL18A1-207ENST00000473212 LRRC74AQ0VAA2 488 aa20.15■□□□□ 0.82
COL18A1-207ENST00000473212 TMEM115Q12893 351 aaPredicted RBP20.15■□□□□ 0.82
COL18A1-207ENST00000473212 CRB2Q5IJ48 1285 aa20.15■□□□□ 0.82
COL18A1-207ENST00000473212 NXNL2Q5VZ03 156 aa20.15■□□□□ 0.82
COL18A1-207ENST00000473212 FRMPD2BQ6IN97 320 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms