RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 CMTM7Q96FZ5 175 aa8.6□□□□□ -1.03
SMC4-214ENST00000472991 SMIM10Q96HG1 83 aa8.6□□□□□ -1.03
SMC4-214ENST00000472991 FAR2Q96K12 515 aa8.6□□□□□ -1.03
SMC4-214ENST00000472991 CNDP1Q96KN2 507 aa8.6□□□□□ -1.03
SMC4-214ENST00000472991 HBEGFQ99075 208 aa8.6□□□□□ -1.03
SMC4-214ENST00000472991 PAIP2Q9BPZ3 127 aaKnown RBP8.6□□□□□ -1.03
SMC4-214ENST00000472991 C17orf62Q9BQA9 187 aa8.6□□□□□ -1.03
SMC4-214ENST00000472991 TRMOQ9BU70 441 aa8.6□□□□□ -1.03
SMC4-214ENST00000472991 EFHD1Q9BUP0 239 aa8.6□□□□□ -1.03
SMC4-214ENST00000472991 YIPF2Q9BWQ6 316 aa8.6□□□□□ -1.03
SMC4-214ENST00000472991 SLC29A3Q9BZD2 475 aa8.6□□□□□ -1.03
SMC4-214ENST00000472991 OR51B5Q9H339 312 aa8.6□□□□□ -1.03
SMC4-214ENST00000472991 ACTL8Q9H568 366 aa8.6□□□□□ -1.03
SMC4-214ENST00000472991 ELOVL6Q9H5J4 265 aa8.6□□□□□ -1.03
SMC4-214ENST00000472991 CPNE5Q9HCH3 593 aa8.6□□□□□ -1.03
SMC4-214ENST00000472991 TNFRSF12AQ9NP84 129 aa8.6□□□□□ -1.03
SMC4-214ENST00000472991 FARSBQ9NSD9 589 aaKnown RBP8.6□□□□□ -1.03
SMC4-214ENST00000472991 NKIRAS1Q9NYS0 192 aa8.6□□□□□ -1.03
SMC4-214ENST00000472991 FRRS1LQ9P0K9 344 aa8.6□□□□□ -1.03
SMC4-214ENST00000472991 TRPC4Q9UBN4 977 aa8.6□□□□□ -1.03
SMC4-214ENST00000472991 ADGRE2Q9UHX3 823 aa8.6□□□□□ -1.03
SMC4-214ENST00000472991 KCND3Q9UK17 655 aa8.6□□□□□ -1.03
SMC4-214ENST00000472991 SNX6Q9UNH7 406 aa8.6□□□□□ -1.03
SMC4-214ENST00000472991 FARSAQ9Y285 508 aaKnown RBP8.6□□□□□ -1.03
SMC4-214ENST00000472991 FIS1Q9Y3D6 152 aa8.6□□□□□ -1.03
SMC4-214ENST00000472991 TIMM22Q9Y584 194 aa8.6□□□□□ -1.03
SMC4-214ENST00000472991 PCDHGA6Q9Y5G7 932 aa8.6□□□□□ -1.03
SMC4-214ENST00000472991 H3BQF6 201 aa8.59□□□□□ -1.03
SMC4-214ENST00000472991 FOXE1O00358 373 aaPredicted RBP8.59□□□□□ -1.03
SMC4-214ENST00000472991 MANBAO00462 879 aa8.59□□□□□ -1.03
SMC4-214ENST00000472991 CRCPO75575 148 aa8.59□□□□□ -1.03
SMC4-214ENST00000472991 KRT6AP02538 564 aa8.59□□□□□ -1.03
SMC4-214ENST00000472991 KRT6BP04259 564 aa8.59□□□□□ -1.03
SMC4-214ENST00000472991 SERPINE1P05121 402 aa8.59□□□□□ -1.03
SMC4-214ENST00000472991 CHRNGP07510 517 aa8.59□□□□□ -1.03
SMC4-214ENST00000472991 NEFHP12036 1026 aa8.59□□□□□ -1.03
SMC4-214ENST00000472991 BGNP21810 368 aa8.59□□□□□ -1.03
SMC4-214ENST00000472991 CERS1P27544 350 aa8.59□□□□□ -1.03
SMC4-214ENST00000472991 PTPN4P29074 926 aa8.59□□□□□ -1.03
SMC4-214ENST00000472991 ARRB2P32121 409 aa8.59□□□□□ -1.03
SMC4-214ENST00000472991 KRT6CP48668 564 aa8.59□□□□□ -1.03
SMC4-214ENST00000472991 RAP1GDS1P52306 607 aa8.59□□□□□ -1.03
SMC4-214ENST00000472991 SLC18A1P54219 525 aa8.59□□□□□ -1.03
SMC4-214ENST00000472991 BTN3A2P78410 334 aa8.59□□□□□ -1.03
SMC4-214ENST00000472991 TGM3Q08188 693 aa8.59□□□□□ -1.03
SMC4-214ENST00000472991 NKG7Q16617 165 aa8.59□□□□□ -1.03
SMC4-214ENST00000472991 VWA2Q5GFL6 755 aa8.59□□□□□ -1.03
SMC4-214ENST00000472991 ARL13AQ5H913 290 aaPredicted RBP8.59□□□□□ -1.03
SMC4-214ENST00000472991 DEPDC1Q5TB30 811 aa8.59□□□□□ -1.03
SMC4-214ENST00000472991 CES4AQ5XG92 561 aa8.59□□□□□ -1.03
SMC4-214ENST00000472991 CLEC6AQ6EIG7 209 aa8.59□□□□□ -1.03
SMC4-214ENST00000472991 NIPAL1Q6NVV3 410 aa8.59□□□□□ -1.03
SMC4-214ENST00000472991 SHISA2Q6UWI4 295 aa8.59□□□□□ -1.03
SMC4-214ENST00000472991 ZNF793Q6ZN11 406 aa8.59□□□□□ -1.03
SMC4-214ENST00000472991 CCDC81Q6ZN84 652 aa8.59□□□□□ -1.03
SMC4-214ENST00000472991 ATG14Q6ZNE5 492 aa8.59□□□□□ -1.03
SMC4-214ENST00000472991 SHISA6Q6ZSJ9 500 aa8.59□□□□□ -1.03
SMC4-214ENST00000472991 OVCH1Q7RTY7 1134 aa8.59□□□□□ -1.03
SMC4-214ENST00000472991 CUZD1Q86UP6 607 aa8.59□□□□□ -1.03
SMC4-214ENST00000472991 DMRTC2Q8IXT2 367 aaPredicted RBP8.59□□□□□ -1.03
SMC4-214ENST00000472991 PRSS58Q8IYP2 241 aa8.59□□□□□ -1.03
SMC4-214ENST00000472991 OR5T3Q8NGG3 340 aa8.59□□□□□ -1.03
SMC4-214ENST00000472991 OR6Y1Q8NGX8 325 aa8.59□□□□□ -1.03
SMC4-214ENST00000472991 STT3BQ8TCJ2 826 aa8.59□□□□□ -1.03
SMC4-214ENST00000472991 CRELD1Q96HD1 420 aa8.59□□□□□ -1.03
SMC4-214ENST00000472991 SLC45A3Q96JT2 553 aa8.59□□□□□ -1.03
SMC4-214ENST00000472991 QRFPRQ96P65 431 aa8.59□□□□□ -1.03
SMC4-214ENST00000472991 KCNC2Q96PR1 638 aa8.59□□□□□ -1.03
SMC4-214ENST00000472991 SORBS1Q9BX66 1292 aaKnown RBP8.59□□□□□ -1.03
SMC4-214ENST00000472991 GPR87Q9BY21 358 aa8.59□□□□□ -1.03
SMC4-214ENST00000472991 RBCK1Q9BYM8 510 aa8.59□□□□□ -1.03
SMC4-214ENST00000472991 SOX17Q9H6I2 414 aaPredicted RBP8.59□□□□□ -1.03
SMC4-214ENST00000472991 COPS7BQ9H9Q2 264 aaPredicted RBP8.59□□□□□ -1.03
SMC4-214ENST00000472991 ZNF282Q9UDV7 671 aaPredicted RBP8.59□□□□□ -1.03
SMC4-214ENST00000472991 TCFL5Q9UL49 500 aa8.59□□□□□ -1.03
SMC4-214ENST00000472991 PPT2Q9UMR5 302 aa8.59□□□□□ -1.03
SMC4-214ENST00000472991 SLC12A4Q9UP95 1085 aa8.59□□□□□ -1.03
SMC4-214ENST00000472991 PADI2Q9Y2J8 665 aa8.59□□□□□ -1.03
SMC4-214ENST00000472991 PTRH2Q9Y3E5 179 aaKnown RBP8.59□□□□□ -1.03
SMC4-214ENST00000472991 TNRC6AQ8NDV7 1962 aaKnown RBP8.59□□□□□ -1.03
SMC4-214ENST00000472991 MGAQ8IWI9 3026 aa8.59□□□□□ -1.04
SMC4-214ENST00000472991 LOC400499M0QZD8 3231 aa8.58□□□□□ -1.04
SMC4-214ENST00000472991 EPG5Q9HCE0 2579 aa8.58□□□□□ -1.04
SMC4-214ENST00000472991 IGLV3-12A0A075B6K2 115 aa8.58□□□□□ -1.04
SMC4-214ENST00000472991 A0A088AWK7 358 aa8.58□□□□□ -1.04
SMC4-214ENST00000472991 ZNF891A8MT65 544 aaPredicted RBP8.58□□□□□ -1.04
SMC4-214ENST00000472991 TMEM233B4DJY2 109 aa8.58□□□□□ -1.04
SMC4-214ENST00000472991 PLPP1O14494 284 aa8.58□□□□□ -1.04
SMC4-214ENST00000472991 AZIN1O14977 448 aa8.58□□□□□ -1.04
SMC4-214ENST00000472991 CHST10O43529 356 aa8.58□□□□□ -1.04
SMC4-214ENST00000472991 ITM2AO43736 263 aa8.58□□□□□ -1.04
SMC4-214ENST00000472991 B3GALT2O43825 422 aa8.58□□□□□ -1.04
SMC4-214ENST00000472991 DNAJB6O75190 326 aa8.58□□□□□ -1.04
SMC4-214ENST00000472991 ULK1O75385 1050 aa8.58□□□□□ -1.04
SMC4-214ENST00000472991 JRKO75564 520 aa8.58□□□□□ -1.04
SMC4-214ENST00000472991 LYPLA1O75608 230 aaPredicted RBP8.58□□□□□ -1.04
SMC4-214ENST00000472991 CREG1O75629 220 aa8.58□□□□□ -1.04
SMC4-214ENST00000472991 KLF7O75840 302 aaPredicted RBP8.58□□□□□ -1.04
SMC4-214ENST00000472991 HSPA4LO95757 839 aa8.58□□□□□ -1.04
SMC4-214ENST00000472991 ZGLP1P0C6A0 271 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms