RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 EIF3BP55884 814 aaKnown RBP9.38□□□□□ -0.91
CDHR3-209ENST00000472116 PRAMEP78395 509 aa9.38□□□□□ -0.91
CDHR3-209ENST00000472116 FOXF2Q12947 444 aa9.38□□□□□ -0.91
CDHR3-209ENST00000472116 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.38□□□□□ -0.91
CDHR3-209ENST00000472116 CCDC181Q5TID7 509 aa9.38□□□□□ -0.91
CDHR3-209ENST00000472116 E4F1Q66K89 784 aaPredicted RBP9.38□□□□□ -0.91
CDHR3-209ENST00000472116 ALKBH5Q6P6C2 394 aaKnown RBP9.38□□□□□ -0.91
CDHR3-209ENST00000472116 MFSD7Q6UXD7 560 aa9.38□□□□□ -0.91
CDHR3-209ENST00000472116 ZNF704Q6ZNC4 412 aaPredicted RBP9.38□□□□□ -0.91
CDHR3-209ENST00000472116 H2AFVQ71UI9 128 aa9.38□□□□□ -0.91
CDHR3-209ENST00000472116 MILR1Q7Z6M3 343 aa9.38□□□□□ -0.91
CDHR3-209ENST00000472116 LDB1Q86U70 411 aaPredicted RBP9.38□□□□□ -0.91
CDHR3-209ENST00000472116 TMEM132CQ8N3T6 1108 aa9.38□□□□□ -0.91
CDHR3-209ENST00000472116 C3orf56Q8N813 242 aa9.38□□□□□ -0.91
CDHR3-209ENST00000472116 C9orf106Q8NAJ2 232 aa9.38□□□□□ -0.91
CDHR3-209ENST00000472116 OR5L2Q8NGL0 311 aa9.38□□□□□ -0.91
CDHR3-209ENST00000472116 OR4L1Q8NH43 312 aa9.38□□□□□ -0.91
CDHR3-209ENST00000472116 IGFBPL1Q8WX77 278 aa9.38□□□□□ -0.91
CDHR3-209ENST00000472116 SREK1Q8WXA9 508 aaKnown RBP9.38□□□□□ -0.91
CDHR3-209ENST00000472116 INTS12Q96CB8 462 aaKnown RBP9.38□□□□□ -0.91
CDHR3-209ENST00000472116 ART5Q96L15 291 aa9.38□□□□□ -0.91
CDHR3-209ENST00000472116 CCDC138Q96M89 665 aa9.38□□□□□ -0.91
CDHR3-209ENST00000472116 HS6ST2Q96MM7 605 aa9.38□□□□□ -0.91
CDHR3-209ENST00000472116 PIGQQ9BRB3 760 aa9.38□□□□□ -0.91
CDHR3-209ENST00000472116 RHNO1Q9BSD3 238 aa9.38□□□□□ -0.91
CDHR3-209ENST00000472116 SLCO5A1Q9H2Y9 848 aa9.38□□□□□ -0.91
CDHR3-209ENST00000472116 CLK4Q9HAZ1 481 aaKnown RBP9.38□□□□□ -0.91
CDHR3-209ENST00000472116 NECTIN3Q9NQS3 549 aa9.38□□□□□ -0.91
CDHR3-209ENST00000472116 ZFATQ9P243 1243 aa9.38□□□□□ -0.91
CDHR3-209ENST00000472116 PPIEQ9UNP9 301 aaKnown RBP9.38□□□□□ -0.91
CDHR3-209ENST00000472116 CLCA3PQ9Y6N3 262 aa9.38□□□□□ -0.91
CDHR3-209ENST00000472116 SYNDIG1LA6NDD5 238 aa9.37□□□□□ -0.91
CDHR3-209ENST00000472116 HS3ST1O14792 307 aa9.37□□□□□ -0.91
CDHR3-209ENST00000472116 MSTNO14793 375 aa9.37□□□□□ -0.91
CDHR3-209ENST00000472116 NDUFS4O43181 175 aa9.37□□□□□ -0.91
CDHR3-209ENST00000472116 TCF21O43680 179 aa9.37□□□□□ -0.91
CDHR3-209ENST00000472116 DLX3O60479 287 aa9.37□□□□□ -0.91
CDHR3-209ENST00000472116 MATN4O95460 622 aa9.37□□□□□ -0.91
CDHR3-209ENST00000472116 SLC16A8O95907 504 aa9.37□□□□□ -0.91
CDHR3-209ENST00000472116 SERPIND1P05546 499 aa9.37□□□□□ -0.91
CDHR3-209ENST00000472116 EGR1P18146 543 aa9.37□□□□□ -0.91
CDHR3-209ENST00000472116 CD79BP40259 229 aa9.37□□□□□ -0.91
CDHR3-209ENST00000472116 KCNJ5P48544 419 aa9.37□□□□□ -0.91
CDHR3-209ENST00000472116 TTPAP49638 278 aa9.37□□□□□ -0.91
CDHR3-209ENST00000472116 DEFA6Q01524 100 aa9.37□□□□□ -0.91
CDHR3-209ENST00000472116 RGS1Q08116 209 aa9.37□□□□□ -0.91
CDHR3-209ENST00000472116 FAM27E3Q08E93 113 aa9.37□□□□□ -0.91
CDHR3-209ENST00000472116 TOMM20Q15388 145 aa9.37□□□□□ -0.91
CDHR3-209ENST00000472116 TMEM249Q2WGJ8 235 aa9.37□□□□□ -0.91
CDHR3-209ENST00000472116 BEX5Q5H9J7 111 aa9.37□□□□□ -0.91
CDHR3-209ENST00000472116 PRAMEF20Q5VT98 475 aa9.37□□□□□ -0.91
CDHR3-209ENST00000472116 LRRC38Q5VT99 294 aa9.37□□□□□ -0.91
CDHR3-209ENST00000472116 TBC1D19Q8N5T2 526 aa9.37□□□□□ -0.91
CDHR3-209ENST00000472116 TM4SF19Q96DZ7 209 aa9.37□□□□□ -0.91
CDHR3-209ENST00000472116 ZNF597Q96LX8 424 aa9.37□□□□□ -0.91
CDHR3-209ENST00000472116 PKP4Q99569 1192 aa9.37□□□□□ -0.91
CDHR3-209ENST00000472116 SLC39A3Q9BRY0 314 aa9.37□□□□□ -0.91
CDHR3-209ENST00000472116 DOHHQ9BU89 302 aa9.37□□□□□ -0.91
CDHR3-209ENST00000472116 LRRC40Q9H9A6 602 aa9.37□□□□□ -0.91
CDHR3-209ENST00000472116 BARX1Q9HBU1 254 aaPredicted RBP9.37□□□□□ -0.91
CDHR3-209ENST00000472116 ADAP2Q9NPF8 381 aa9.37□□□□□ -0.91
CDHR3-209ENST00000472116 HOMER3Q9NSC5 361 aa9.37□□□□□ -0.91
CDHR3-209ENST00000472116 R3HDM2Q9Y2K5 976 aaKnown RBP9.37□□□□□ -0.91
CDHR3-209ENST00000472116 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.37□□□□□ -0.91
CDHR3-209ENST00000472116 ALPK2Q86TB3 2170 aa9.36□□□□□ -0.91
CDHR3-209ENST00000472116 URADA6NGE7 173 aa9.36□□□□□ -0.91
CDHR3-209ENST00000472116 MROH6A6NGR9 719 aa9.36□□□□□ -0.91
CDHR3-209ENST00000472116 E7ENX8 843 aa9.36□□□□□ -0.91
CDHR3-209ENST00000472116 GPRIN2O60269 458 aa9.36□□□□□ -0.91
CDHR3-209ENST00000472116 CEP104O60308 925 aa9.36□□□□□ -0.91
CDHR3-209ENST00000472116 LMX1BO60663 402 aa9.36□□□□□ -0.91
CDHR3-209ENST00000472116 ADAM11O75078 769 aa9.36□□□□□ -0.91
CDHR3-209ENST00000472116 RCBTB2O95199 551 aa9.36□□□□□ -0.91
CDHR3-209ENST00000472116 IFNA16P05015 189 aa9.36□□□□□ -0.91
CDHR3-209ENST00000472116 POU2F1P14859 743 aa9.36□□□□□ -0.91
CDHR3-209ENST00000472116 ATP5DP30049 168 aa9.36□□□□□ -0.91
CDHR3-209ENST00000472116 CDKN2BP42772 138 aa9.36□□□□□ -0.91
CDHR3-209ENST00000472116 PCYT1AP49585 367 aa9.36□□□□□ -0.91
CDHR3-209ENST00000472116 UBE2HP62256 183 aa9.36□□□□□ -0.91
CDHR3-209ENST00000472116 SLC13A2Q13183 592 aa9.36□□□□□ -0.91
CDHR3-209ENST00000472116 BBS9Q3SYG4 887 aa9.36□□□□□ -0.91
CDHR3-209ENST00000472116 CYB5R2Q6BCY4 276 aa9.36□□□□□ -0.91
CDHR3-209ENST00000472116 VASNQ6EMK4 673 aa9.36□□□□□ -0.91
CDHR3-209ENST00000472116 ZNF550Q7Z398 422 aa9.36□□□□□ -0.91
CDHR3-209ENST00000472116 LRRC6Q86X45 466 aa9.36□□□□□ -0.91
CDHR3-209ENST00000472116 CDKL3Q8IVW4 592 aaPredicted RBP9.36□□□□□ -0.91
CDHR3-209ENST00000472116 GCNT2Q8N0V5 402 aa9.36□□□□□ -0.91
CDHR3-209ENST00000472116 AFAP1L2Q8N4X5 818 aa9.36□□□□□ -0.91
CDHR3-209ENST00000472116 RFLNBQ8N5W9 214 aa9.36□□□□□ -0.91
CDHR3-209ENST00000472116 TC2NQ8N9U0 490 aa9.36□□□□□ -0.91
CDHR3-209ENST00000472116 ZNF740Q8NDX6 193 aa9.36□□□□□ -0.91
CDHR3-209ENST00000472116 FAM13CQ8NE31 585 aa9.36□□□□□ -0.91
CDHR3-209ENST00000472116 ZPLD1Q8TCW7 415 aa9.36□□□□□ -0.91
CDHR3-209ENST00000472116 ZNF480Q8WV37 535 aa9.36□□□□□ -0.91
CDHR3-209ENST00000472116 DAZLQ92904 295 aaKnown RBP9.36□□□□□ -0.91
CDHR3-209ENST00000472116 TNFRSF13CQ96RJ3 184 aa9.36□□□□□ -0.91
CDHR3-209ENST00000472116 KRT12Q99456 494 aa9.36□□□□□ -0.91
CDHR3-209ENST00000472116 PCBD2Q9H0N5 130 aa9.36□□□□□ -0.91
CDHR3-209ENST00000472116 CCDC177Q9NQR7 707 aaPredicted RBP9.36□□□□□ -0.91
CDHR3-209ENST00000472116 CNIH4Q9P003 139 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms