RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 CDC123O75794 336 aaPredicted RBP14.38□□□□□ -0.11
SDC3-203ENST00000471567 ETHE1O95571 254 aa14.38□□□□□ -0.11
SDC3-203ENST00000471567 ICAM2P13598 275 aa14.38□□□□□ -0.11
SDC3-203ENST00000471567 HSD3B1P14060 373 aa14.38□□□□□ -0.11
SDC3-203ENST00000471567 HSD3B2P26439 372 aa14.38□□□□□ -0.11
SDC3-203ENST00000471567 HMOX2P30519 316 aa14.38□□□□□ -0.11
SDC3-203ENST00000471567 BSGP35613 385 aa14.38□□□□□ -0.11
SDC3-203ENST00000471567 HSD17B7P56937 341 aa14.38□□□□□ -0.11
SDC3-203ENST00000471567 AP2B1P63010 937 aa14.38□□□□□ -0.11
SDC3-203ENST00000471567 MYBPC3Q14896 1274 aa14.38□□□□□ -0.11
SDC3-203ENST00000471567 ABRAXAS2Q15018 415 aa14.38□□□□□ -0.11
SDC3-203ENST00000471567 PCOLCEQ15113 449 aa14.38□□□□□ -0.11
SDC3-203ENST00000471567 SGO1Q5FBB7 561 aa14.38□□□□□ -0.11
SDC3-203ENST00000471567 ANKRD37Q7Z713 158 aa14.38□□□□□ -0.11
SDC3-203ENST00000471567 HOMEZQ8IX15 550 aa14.38□□□□□ -0.11
SDC3-203ENST00000471567 ZNF595Q8IYB9 648 aa14.38□□□□□ -0.11
SDC3-203ENST00000471567 AGAP11Q8TF27 550 aa14.38□□□□□ -0.11
SDC3-203ENST00000471567 CNDP1Q96KN2 507 aa14.38□□□□□ -0.11
SDC3-203ENST00000471567 PTCHD1Q96NR3 888 aa14.38□□□□□ -0.11
SDC3-203ENST00000471567 MESP1Q9BRJ9 268 aa14.38□□□□□ -0.11
SDC3-203ENST00000471567 TRMOQ9BU70 441 aa14.38□□□□□ -0.11
SDC3-203ENST00000471567 TUBB6Q9BUF5 446 aa14.38□□□□□ -0.11
SDC3-203ENST00000471567 SEMA4CQ9C0C4 833 aa14.38□□□□□ -0.11
SDC3-203ENST00000471567 DDX31Q9H8H2 851 aaKnown RBP14.38□□□□□ -0.11
SDC3-203ENST00000471567 MID1IP1Q9NPA3 183 aa14.38□□□□□ -0.11
SDC3-203ENST00000471567 MS4A12Q9NXJ0 267 aa14.38□□□□□ -0.11
SDC3-203ENST00000471567 GPR83Q9NYM4 423 aa14.38□□□□□ -0.11
SDC3-203ENST00000471567 PIEZO2Q9H5I5 2752 aa14.38□□□□□ -0.11
SDC3-203ENST00000471567 NUP210LQ5VU65 1888 aa14.38□□□□□ -0.11
SDC3-203ENST00000471567 IGKV3D-11A0A0A0MRZ8 115 aa14.37□□□□□ -0.11
SDC3-203ENST00000471567 OR2W5A6NFC9 320 aa14.37□□□□□ -0.11
SDC3-203ENST00000471567 A6NL46 340 aa14.37□□□□□ -0.11
SDC3-203ENST00000471567 UBFD1O14562 309 aaKnown RBP14.37□□□□□ -0.11
SDC3-203ENST00000471567 ULK1O75385 1050 aa14.37□□□□□ -0.11
SDC3-203ENST00000471567 PDYNP01213 254 aa14.37□□□□□ -0.11
SDC3-203ENST00000471567 ALDH3A1P30838 453 aa14.37□□□□□ -0.11
SDC3-203ENST00000471567 BTG2P78543 158 aa14.37□□□□□ -0.11
SDC3-203ENST00000471567 EEF1A2Q05639 463 aaKnown RBP14.37□□□□□ -0.11
SDC3-203ENST00000471567 SLAMF1Q13291 335 aa14.37□□□□□ -0.11
SDC3-203ENST00000471567 CASP8Q14790 479 aa14.37□□□□□ -0.11
SDC3-203ENST00000471567 LACTB2Q53H82 288 aaPredicted RBP14.37□□□□□ -0.11
SDC3-203ENST00000471567 IRAK1BP1Q5VVH5 260 aa14.37□□□□□ -0.11
SDC3-203ENST00000471567 RIPOR1Q6ZS17 1223 aa14.37□□□□□ -0.11
SDC3-203ENST00000471567 LANCL3Q6ZV70 420 aa14.37□□□□□ -0.11
SDC3-203ENST00000471567 NUDT13Q86X67 352 aa14.37□□□□□ -0.11
SDC3-203ENST00000471567 HPS6Q86YV9 775 aa14.37□□□□□ -0.11
SDC3-203ENST00000471567 SCUBE1Q8IWY4 988 aa14.37□□□□□ -0.11
SDC3-203ENST00000471567 PARP9Q8IXQ6 854 aa14.37□□□□□ -0.11
SDC3-203ENST00000471567 GBP7Q8N8V2 638 aaPredicted RBP14.37□□□□□ -0.11
SDC3-203ENST00000471567 C7orf57Q8NEG2 295 aa14.37□□□□□ -0.11
SDC3-203ENST00000471567 FDCSPQ8NFU4 85 aa14.37□□□□□ -0.11
SDC3-203ENST00000471567 SREK1Q8WXA9 508 aaKnown RBP14.37□□□□□ -0.11
SDC3-203ENST00000471567 IMMP1LQ96LU5 166 aa14.37□□□□□ -0.11
SDC3-203ENST00000471567 SMAD5Q99717 465 aaKnown RBP14.37□□□□□ -0.11
SDC3-203ENST00000471567 MAPKAP1Q9BPZ7 522 aa14.37□□□□□ -0.11
SDC3-203ENST00000471567 GATA5Q9BWX5 397 aaPredicted RBP14.37□□□□□ -0.11
SDC3-203ENST00000471567 ZNF717Q9BY31 904 aaPredicted RBP14.37□□□□□ -0.11
SDC3-203ENST00000471567 ZNF160Q9HCG1 818 aa14.37□□□□□ -0.11
SDC3-203ENST00000471567 PRTFDC1Q9NRG1 225 aa14.37□□□□□ -0.11
SDC3-203ENST00000471567 FARSBQ9NSD9 589 aaKnown RBP14.37□□□□□ -0.11
SDC3-203ENST00000471567 LYARQ9NX58 379 aaKnown RBP14.37□□□□□ -0.11
SDC3-203ENST00000471567 C5AR2Q9P296 337 aa14.37□□□□□ -0.11
SDC3-203ENST00000471567 ADAM29Q9UKF5 820 aa14.37□□□□□ -0.11
SDC3-203ENST00000471567 ZNF451Q9Y4E5 1061 aa14.37□□□□□ -0.11
SDC3-203ENST00000471567 ATRXP46100 2492 aa14.37□□□□□ -0.11
SDC3-203ENST00000471567 ATMQ13315 3056 aa14.37□□□□□ -0.11
SDC3-203ENST00000471567 A0A0A6YYD5 115 aa14.36□□□□□ -0.11
SDC3-203ENST00000471567 TCRBV16S1A1N1A0A5B0 115 aa14.36□□□□□ -0.11
SDC3-203ENST00000471567 SERTM1A2A2V5 107 aa14.36□□□□□ -0.11
SDC3-203ENST00000471567 GOLGA6L10A6NI86 522 aa14.36□□□□□ -0.11
SDC3-203ENST00000471567 MASP2O00187 686 aa14.36□□□□□ -0.11
SDC3-203ENST00000471567 TM9SF1O15321 606 aa14.36□□□□□ -0.11
SDC3-203ENST00000471567 CTNSO60931 367 aa14.36□□□□□ -0.11
SDC3-203ENST00000471567 SERPINA7P05543 415 aa14.36□□□□□ -0.11
SDC3-203ENST00000471567 ITGA3P26006 1051 aa14.36□□□□□ -0.11
SDC3-203ENST00000471567 ETV4P43268 484 aa14.36□□□□□ -0.11
SDC3-203ENST00000471567 PGDP52209 483 aa14.36□□□□□ -0.11
SDC3-203ENST00000471567 OR4D2P58180 307 aa14.36□□□□□ -0.11
SDC3-203ENST00000471567 ACTN3Q08043 901 aaPredicted RBP14.36□□□□□ -0.11
SDC3-203ENST00000471567 Q0VFX4 171 aa14.36□□□□□ -0.11
SDC3-203ENST00000471567 CSTF3Q12996 717 aaKnown RBP14.36□□□□□ -0.11
SDC3-203ENST00000471567 SFT2D3Q587I9 215 aa14.36□□□□□ -0.11
SDC3-203ENST00000471567 VWA5B1Q5TIE3 1220 aa14.36□□□□□ -0.11
SDC3-203ENST00000471567 MRM1Q6IN84 353 aaKnown RBP14.36□□□□□ -0.11
SDC3-203ENST00000471567 PAGE2Q7Z2X7 111 aa14.36□□□□□ -0.11
SDC3-203ENST00000471567 GPR180Q86V85 440 aa14.36□□□□□ -0.11
SDC3-203ENST00000471567 KBTBD2Q8IY47 623 aa14.36□□□□□ -0.11
SDC3-203ENST00000471567 METTL4Q8N3J2 472 aa14.36□□□□□ -0.11
SDC3-203ENST00000471567 TSLPQ969D9 159 aa14.36□□□□□ -0.11
SDC3-203ENST00000471567 LPAR4Q99677 370 aa14.36□□□□□ -0.11
SDC3-203ENST00000471567 NUDT9Q9BW91 350 aa14.36□□□□□ -0.11
SDC3-203ENST00000471567 SORBS1Q9BX66 1292 aaKnown RBP14.36□□□□□ -0.11
SDC3-203ENST00000471567 LHPPQ9H008 270 aa14.36□□□□□ -0.11
SDC3-203ENST00000471567 ARGLU1Q9NWB6 273 aaPredicted RBP14.36□□□□□ -0.11
SDC3-203ENST00000471567 PHF11Q9UIL8 331 aa14.36□□□□□ -0.11
SDC3-203ENST00000471567 SLC12A4Q9UP95 1085 aa14.36□□□□□ -0.11
SDC3-203ENST00000471567 TP53TG5Q9Y2B4 290 aa14.36□□□□□ -0.11
SDC3-203ENST00000471567 NPHS1O60500 1241 aa14.35□□□□□ -0.11
SDC3-203ENST00000471567 EEDO75530 441 aaKnown RBP14.35□□□□□ -0.11
SDC3-203ENST00000471567 ALPPP05187 535 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms