RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 NCF1CA8MVU1 366 aaPredicted RBP12.66□□□□□ -0.38
HMGN1-211ENST00000471260 TAPBPO15533 448 aa12.66□□□□□ -0.38
HMGN1-211ENST00000471260 PHGDHO43175 533 aaKnown RBP12.66□□□□□ -0.38
HMGN1-211ENST00000471260 B4GALT2O60909 372 aa12.66□□□□□ -0.38
HMGN1-211ENST00000471260 ATP5HO75947 161 aa12.66□□□□□ -0.38
HMGN1-211ENST00000471260 RNF224P0DH78 156 aa12.66□□□□□ -0.38
HMGN1-211ENST00000471260 NCF1P14598 390 aaPredicted RBP12.66□□□□□ -0.38
HMGN1-211ENST00000471260 CRABP2P29373 138 aa12.66□□□□□ -0.38
HMGN1-211ENST00000471260 HNF4AP41235 474 aa12.66□□□□□ -0.38
HMGN1-211ENST00000471260 TDGF1P3P51864 188 aa12.66□□□□□ -0.38
HMGN1-211ENST00000471260 SLC26A5P58743 744 aa12.66□□□□□ -0.38
HMGN1-211ENST00000471260 RAB8AP61006 207 aa12.66□□□□□ -0.38
HMGN1-211ENST00000471260 OLR1P78380 273 aa12.66□□□□□ -0.38
HMGN1-211ENST00000471260 LAPTM5Q13571 262 aa12.66□□□□□ -0.38
HMGN1-211ENST00000471260 SLBPQ14493 270 aaKnown RBP eCLIP12.66□□□□□ -0.38
HMGN1-211ENST00000471260 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.66□□□□□ -0.38
HMGN1-211ENST00000471260 ADPRMQ3LIE5 342 aa12.66□□□□□ -0.38
HMGN1-211ENST00000471260 KBTBD12Q3ZCT8 623 aa12.66□□□□□ -0.38
HMGN1-211ENST00000471260 ZNF766Q5HY98 468 aa12.66□□□□□ -0.38
HMGN1-211ENST00000471260 TOR1AIP1Q5JTV8 583 aa12.66□□□□□ -0.38
HMGN1-211ENST00000471260 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.66□□□□□ -0.38
HMGN1-211ENST00000471260 BEST3Q8N1M1 668 aa12.66□□□□□ -0.38
HMGN1-211ENST00000471260 CA13Q8N1Q1 262 aa12.66□□□□□ -0.38
HMGN1-211ENST00000471260 CCDC63Q8NA47 563 aa12.66□□□□□ -0.38
HMGN1-211ENST00000471260 MS4A6EQ96DS6 147 aa12.66□□□□□ -0.38
HMGN1-211ENST00000471260 WDR34Q96EX3 536 aa12.66□□□□□ -0.38
HMGN1-211ENST00000471260 PTCD3Q96EY7 689 aaKnown RBP12.66□□□□□ -0.38
HMGN1-211ENST00000471260 UTP23Q9BRU9 249 aaKnown RBP12.66□□□□□ -0.38
HMGN1-211ENST00000471260 TMEM79Q9BSE2 394 aa12.66□□□□□ -0.38
HMGN1-211ENST00000471260 EFCAB11Q9BUY7 163 aa12.66□□□□□ -0.38
HMGN1-211ENST00000471260 YY1AP1Q9H869 796 aa12.66□□□□□ -0.38
HMGN1-211ENST00000471260 NMRAL1Q9HBL8 299 aa12.66□□□□□ -0.38
HMGN1-211ENST00000471260 OSGIN2Q9Y236 505 aa12.66□□□□□ -0.38
HMGN1-211ENST00000471260 MAST4O15021 2626 aa12.65□□□□□ -0.38
HMGN1-211ENST00000471260 DOPEY1Q5JWR5 2465 aa12.65□□□□□ -0.38
HMGN1-211ENST00000471260 SAGE2PA6NJ88 616 aa12.65□□□□□ -0.38
HMGN1-211ENST00000471260 CLDN4O14493 209 aa12.65□□□□□ -0.38
HMGN1-211ENST00000471260 MGRN1O60291 552 aa12.65□□□□□ -0.38
HMGN1-211ENST00000471260 DNAJB6O75190 326 aa12.65□□□□□ -0.38
HMGN1-211ENST00000471260 ZWINTO95229 277 aa12.65□□□□□ -0.38
HMGN1-211ENST00000471260 MLYCDO95822 493 aa12.65□□□□□ -0.38
HMGN1-211ENST00000471260 F10P00742 488 aa12.65□□□□□ -0.38
HMGN1-211ENST00000471260 S100BP04271 92 aaPredicted RBP12.65□□□□□ -0.38
HMGN1-211ENST00000471260 MNAT1P51948 309 aa12.65□□□□□ -0.38
HMGN1-211ENST00000471260 BTN3A2P78410 334 aa12.65□□□□□ -0.38
HMGN1-211ENST00000471260 BTG2P78543 158 aa12.65□□□□□ -0.38
HMGN1-211ENST00000471260 TGM3Q08188 693 aa12.65□□□□□ -0.38
HMGN1-211ENST00000471260 TUBA3CQ13748 450 aa12.65□□□□□ -0.38
HMGN1-211ENST00000471260 E2F2Q14209 437 aa12.65□□□□□ -0.38
HMGN1-211ENST00000471260 RCN2Q14257 317 aa12.65□□□□□ -0.38
HMGN1-211ENST00000471260 TBCCQ15814 346 aa12.65□□□□□ -0.38
HMGN1-211ENST00000471260 HIST2H2ACQ16777 129 aaPredicted RBP12.65□□□□□ -0.38
HMGN1-211ENST00000471260 C18orf21Q32NC0 220 aaPredicted RBP12.65□□□□□ -0.38
HMGN1-211ENST00000471260 GALNTL6Q49A17 601 aa12.65□□□□□ -0.38
HMGN1-211ENST00000471260 PAGE2BQ5JRK9 111 aa12.65□□□□□ -0.38
HMGN1-211ENST00000471260 HIST2H2AA3Q6FI13 130 aa12.65□□□□□ -0.38
HMGN1-211ENST00000471260 TRIM40Q6P9F5 258 aa12.65□□□□□ -0.38
HMGN1-211ENST00000471260 TUBA3EQ6PEY2 450 aa12.65□□□□□ -0.38
HMGN1-211ENST00000471260 TBC1D1Q86TI0 1168 aaPredicted RBP12.65□□□□□ -0.38
HMGN1-211ENST00000471260 RPS19BP1Q86WX3 136 aaKnown RBP12.65□□□□□ -0.38
HMGN1-211ENST00000471260 CRLF3Q8IUI8 442 aa12.65□□□□□ -0.38
HMGN1-211ENST00000471260 SPATA6LQ8N4H0 392 aa12.65□□□□□ -0.38
HMGN1-211ENST00000471260 PPM1NQ8N819 430 aa12.65□□□□□ -0.38
HMGN1-211ENST00000471260 TMEM178AQ8NBL3 297 aa12.65□□□□□ -0.38
HMGN1-211ENST00000471260 SRFBP1Q8NEF9 429 aaKnown RBP12.65□□□□□ -0.38
HMGN1-211ENST00000471260 OR2L5Q8NG80 312 aa12.65□□□□□ -0.38
HMGN1-211ENST00000471260 FBF1Q8TES7 1133 aa12.65□□□□□ -0.38
HMGN1-211ENST00000471260 ELAC2Q9BQ52 826 aaKnown RBP12.65□□□□□ -0.38
HMGN1-211ENST00000471260 REXO4Q9GZR2 422 aaKnown RBP12.65□□□□□ -0.38
HMGN1-211ENST00000471260 RHBGQ9H310 441 aa12.65□□□□□ -0.38
HMGN1-211ENST00000471260 CD274Q9NZQ7 290 aa12.65□□□□□ -0.38
HMGN1-211ENST00000471260 KLHL14Q9P2G3 628 aa12.65□□□□□ -0.38
HMGN1-211ENST00000471260 RNF112Q9ULX5 631 aa12.65□□□□□ -0.38
HMGN1-211ENST00000471260 MRPS33Q9Y291 106 aaKnown RBP12.65□□□□□ -0.38
HMGN1-211ENST00000471260 LRRTM2O43300 516 aa12.64□□□□□ -0.39
HMGN1-211ENST00000471260 ERI3O43414 337 aaKnown RBP12.64□□□□□ -0.39
HMGN1-211ENST00000471260 B3GALT2O43825 422 aa12.64□□□□□ -0.39
HMGN1-211ENST00000471260 HNRNPCL1O60812 293 aaKnown RBP12.64□□□□□ -0.39
HMGN1-211ENST00000471260 B3GALT4O96024 378 aa12.64□□□□□ -0.39
HMGN1-211ENST00000471260 CD46P15529 392 aa12.64□□□□□ -0.39
HMGN1-211ENST00000471260 CD96P40200 585 aa12.64□□□□□ -0.39
HMGN1-211ENST00000471260 CASP2P42575 452 aa12.64□□□□□ -0.39
HMGN1-211ENST00000471260 HSPA7P48741 367 aa12.64□□□□□ -0.39
HMGN1-211ENST00000471260 GTF2A1P52655 376 aaPredicted RBP12.64□□□□□ -0.39
HMGN1-211ENST00000471260 HSD17B7P56937 341 aa12.64□□□□□ -0.39
HMGN1-211ENST00000471260 PCDH1Q08174 1060 aa12.64□□□□□ -0.39
HMGN1-211ENST00000471260 OR4D1Q15615 310 aa12.64□□□□□ -0.39
HMGN1-211ENST00000471260 OR1C1Q15619 314 aa12.64□□□□□ -0.39
HMGN1-211ENST00000471260 PDK4Q16654 411 aa12.64□□□□□ -0.39
HMGN1-211ENST00000471260 XKR6Q5GH73 641 aa12.64□□□□□ -0.39
HMGN1-211ENST00000471260 UBAP2Q5T6F2 1119 aaKnown RBP12.64□□□□□ -0.39
HMGN1-211ENST00000471260 RAPH1Q70E73 1250 aa12.64□□□□□ -0.39
HMGN1-211ENST00000471260 LRRC70Q7Z2Q7 622 aa12.64□□□□□ -0.39
HMGN1-211ENST00000471260 ISCA2Q86U28 154 aa12.64□□□□□ -0.39
HMGN1-211ENST00000471260 SRRM1Q8IYB3 904 aaKnown RBP12.64□□□□□ -0.39
HMGN1-211ENST00000471260 ZNF595Q8IYB9 648 aa12.64□□□□□ -0.39
HMGN1-211ENST00000471260 ARMC10Q8N2F6 343 aa12.64□□□□□ -0.39
HMGN1-211ENST00000471260 FAM98AQ8NCA5 519 aaKnown RBP12.64□□□□□ -0.39
HMGN1-211ENST00000471260 MDS2Q8NDY4 140 aa12.64□□□□□ -0.39
HMGN1-211ENST00000471260 C7orf57Q8NEG2 295 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms