RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 KREMEN2Q8NCW0 462 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 VN1R2Q8NFZ6 395 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 CYB5D2Q8WUJ1 264 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 EFHD2Q96C19 240 aaPredicted RBP13.04□□□□□ -0.32
BRCA1-209ENST00000470026 DTD2Q96FN9 168 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 LINC00615Q96LM1 132 aaPredicted RBP13.04□□□□□ -0.32
BRCA1-209ENST00000470026 LINC00597Q9H2U6 94 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 RNF167Q9H6Y7 350 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 SLC25A19Q9HC21 320 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 TRIM39Q9HCM9 518 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 PRDM8Q9NQV8 689 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 ABCB10Q9NRK6 738 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 QPCTLQ9NXS2 382 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 TBX21Q9UL17 535 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 MAP4K5Q9Y4K4 846 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 PEX16Q9Y5Y5 336 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 KIAA1549LQ6ZVL6 1849 aa13.03□□□□□ -0.32
BRCA1-209ENST00000470026 TRBC2A0A5B9 178 aa13.03□□□□□ -0.32
BRCA1-209ENST00000470026 HAT1O14929 419 aa13.03□□□□□ -0.32
BRCA1-209ENST00000470026 TBX1O43435 398 aa13.03□□□□□ -0.32
BRCA1-209ENST00000470026 TBX19O60806 448 aa13.03□□□□□ -0.32
BRCA1-209ENST00000470026 COQ9O75208 318 aa13.03□□□□□ -0.32
BRCA1-209ENST00000470026 ELFN1P0C7U0 828 aa13.03□□□□□ -0.32
BRCA1-209ENST00000470026 UQCRC2P22695 453 aa13.03□□□□□ -0.32
BRCA1-209ENST00000470026 CHI3L1P36222 383 aaPredicted RBP13.03□□□□□ -0.32
BRCA1-209ENST00000470026 ATN1P54259 1190 aaPredicted RBP13.03□□□□□ -0.32
BRCA1-209ENST00000470026 PRMT2P55345 433 aa13.03□□□□□ -0.32
BRCA1-209ENST00000470026 PUM1Q14671 1186 aaKnown RBP eCLIP13.03□□□□□ -0.32
BRCA1-209ENST00000470026 ZNF77Q15935 545 aa13.03□□□□□ -0.32
BRCA1-209ENST00000470026 BCL2A1Q16548 175 aa13.03□□□□□ -0.32
BRCA1-209ENST00000470026 LY6G5CQ5SRR4 150 aa13.03□□□□□ -0.32
BRCA1-209ENST00000470026 SLC39A5Q6ZMH5 540 aa13.03□□□□□ -0.32
BRCA1-209ENST00000470026 VN1R5Q7Z5H4 357 aa13.03□□□□□ -0.32
BRCA1-209ENST00000470026 SETD7Q8WTS6 366 aaKnown RBP13.03□□□□□ -0.32
BRCA1-209ENST00000470026 SORCS1Q8WY21 1168 aa13.03□□□□□ -0.32
BRCA1-209ENST00000470026 SLC35B4Q969S0 331 aa13.03□□□□□ -0.32
BRCA1-209ENST00000470026 DHRS1Q96LJ7 313 aa13.03□□□□□ -0.32
BRCA1-209ENST00000470026 C6orf62Q9GZU0 229 aaPredicted RBP13.03□□□□□ -0.32
BRCA1-209ENST00000470026 NMNAT1Q9HAN9 279 aaPredicted RBP13.03□□□□□ -0.32
BRCA1-209ENST00000470026 PAK6Q9NQU5 681 aaPredicted RBP13.03□□□□□ -0.32
BRCA1-209ENST00000470026 SACM1LQ9NTJ5 587 aa13.03□□□□□ -0.32
BRCA1-209ENST00000470026 ZNF229Q9UJW7 825 aa13.03□□□□□ -0.32
BRCA1-209ENST00000470026 OGDHLQ9ULD0 1010 aa13.03□□□□□ -0.32
BRCA1-209ENST00000470026 GPC6Q9Y625 555 aaPredicted RBP13.03□□□□□ -0.32
BRCA1-209ENST00000470026 FFAR1O14842 300 aa13.03□□□□□ -0.32
BRCA1-209ENST00000470026 SPINT1O43278 529 aa13.03□□□□□ -0.32
BRCA1-209ENST00000470026 KCNK2O95069 426 aa13.03□□□□□ -0.32
BRCA1-209ENST00000470026 ADAP00813 363 aa13.03□□□□□ -0.32
BRCA1-209ENST00000470026 GASTP01350 101 aa13.03□□□□□ -0.32
BRCA1-209ENST00000470026 KLK1P06870 262 aa13.03□□□□□ -0.32
BRCA1-209ENST00000470026 XPAP23025 273 aaPredicted RBP13.03□□□□□ -0.32
BRCA1-209ENST00000470026 ACADLP28330 430 aa13.03□□□□□ -0.32
BRCA1-209ENST00000470026 PBLDP30039 288 aaPredicted RBP13.03□□□□□ -0.32
BRCA1-209ENST00000470026 DSTNP60981 165 aa13.03□□□□□ -0.32
BRCA1-209ENST00000470026 TLE2Q04725 743 aa13.03□□□□□ -0.32
BRCA1-209ENST00000470026 GRIN2CQ14957 1233 aa13.03□□□□□ -0.32
BRCA1-209ENST00000470026 TMEM201Q5SNT2 666 aa13.03□□□□□ -0.32
BRCA1-209ENST00000470026 PLAG1Q6DJT9 500 aa13.03□□□□□ -0.32
BRCA1-209ENST00000470026 PARS2Q7L3T8 475 aaKnown RBP13.03□□□□□ -0.32
BRCA1-209ENST00000470026 CCDC190Q86UF4 302 aa13.03□□□□□ -0.32
BRCA1-209ENST00000470026 AQP11Q8NBQ7 271 aa13.03□□□□□ -0.32
BRCA1-209ENST00000470026 OR5AK3PQ8NH89 298 aa13.03□□□□□ -0.32
BRCA1-209ENST00000470026 UBE2E3Q969T4 207 aa13.03□□□□□ -0.32
BRCA1-209ENST00000470026 TCEAL4Q96EI5 215 aa13.03□□□□□ -0.32
BRCA1-209ENST00000470026 PPP1R16AQ96I34 528 aa13.03□□□□□ -0.32
BRCA1-209ENST00000470026 TMEM121BQ9BXQ6 578 aaPredicted RBP13.03□□□□□ -0.32
BRCA1-209ENST00000470026 SLC6A16Q9GZN6 736 aa13.03□□□□□ -0.32
BRCA1-209ENST00000470026 MTG2Q9H4K7 406 aa13.03□□□□□ -0.32
BRCA1-209ENST00000470026 A4GALTQ9NPC4 353 aa13.03□□□□□ -0.32
BRCA1-209ENST00000470026 TDP1Q9NUW8 608 aa13.03□□□□□ -0.32
BRCA1-209ENST00000470026 HCFC1R1Q9NWW0 138 aa13.03□□□□□ -0.32
BRCA1-209ENST00000470026 TAAR2Q9P1P5 351 aa13.03□□□□□ -0.32
BRCA1-209ENST00000470026 TBC1D14Q9P2M4 693 aa13.03□□□□□ -0.32
BRCA1-209ENST00000470026 MKLN1Q9UL63 735 aa13.03□□□□□ -0.32
BRCA1-209ENST00000470026 A0A075B6Q4 140 aa13.02□□□□□ -0.33
BRCA1-209ENST00000470026 C17orf113A0A1B0GUU1 675 aa13.02□□□□□ -0.33
BRCA1-209ENST00000470026 M0R129 80 aa13.02□□□□□ -0.33
BRCA1-209ENST00000470026 CACNB4O00305 520 aaPredicted RBP13.02□□□□□ -0.33
BRCA1-209ENST00000470026 SAP18O00422 153 aaKnown RBP13.02□□□□□ -0.33
BRCA1-209ENST00000470026 CCL16O15467 120 aa13.02□□□□□ -0.33
BRCA1-209ENST00000470026 ZW10O43264 779 aa13.02□□□□□ -0.33
BRCA1-209ENST00000470026 FGF18O76093 207 aa13.02□□□□□ -0.33
BRCA1-209ENST00000470026 IFNW1P05000 195 aa13.02□□□□□ -0.33
BRCA1-209ENST00000470026 IL3P08700 152 aa13.02□□□□□ -0.33
BRCA1-209ENST00000470026 ENDOUP21128 410 aaKnown RBP13.02□□□□□ -0.33
BRCA1-209ENST00000470026 S100A5P33763 92 aa13.02□□□□□ -0.33
BRCA1-209ENST00000470026 NNMTP40261 264 aa13.02□□□□□ -0.33
BRCA1-209ENST00000470026 SNRPGP62308 76 aaKnown RBP13.02□□□□□ -0.33
BRCA1-209ENST00000470026 DOC2BQ14184 412 aa13.02□□□□□ -0.33
BRCA1-209ENST00000470026 DUSP7Q16829 419 aa13.02□□□□□ -0.33
BRCA1-209ENST00000470026 TIMM50Q3ZCQ8 353 aa13.02□□□□□ -0.33
BRCA1-209ENST00000470026 CYP27C1Q4G0S4 372 aa13.02□□□□□ -0.33
BRCA1-209ENST00000470026 IER5LQ5T953 404 aa13.02□□□□□ -0.33
BRCA1-209ENST00000470026 SAXO2Q658L1 398 aa13.02□□□□□ -0.33
BRCA1-209ENST00000470026 REEP3Q6NUK4 255 aa13.02□□□□□ -0.33
BRCA1-209ENST00000470026 ERAP2Q6P179 960 aa13.02□□□□□ -0.33
BRCA1-209ENST00000470026 ZNF765Q7L2R6 523 aa13.02□□□□□ -0.33
BRCA1-209ENST00000470026 SLC9B2Q86UD5 537 aa13.02□□□□□ -0.33
BRCA1-209ENST00000470026 FAM129CQ86XR2 697 aa13.02□□□□□ -0.33
BRCA1-209ENST00000470026 SLC44A2Q8IWA5 706 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms